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ORIGINAL RESEARCH article

Front. Psychol., 19 December 2024
Sec. Consciousness Research

Deciphering network dysregulations and temporo-spatial dynamics in disorders of consciousness: insights from minimum spanning tree analysis

Yangyang Dai&#x;Yangyang Dai1Qiheng He&#x;Qiheng He2Shan WangShan Wang3Tianqing CaoTianqing Cao2Xiaoke ChaiXiaoke Chai2Nan WangNan Wang2Yijun DongYijun Dong4Peiling WongPeiling Wong5Jianghong HeJianghong He2Feng Duan
Feng Duan1*Yi Yang,,,
Yi Yang2,6,7,8*
  • 1Tianjin Key Laboratory of Brain Science and Intelligent Rehabilitation, College of Artificial Intelligence, Nankai University, Tianjin, China
  • 2Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing, China
  • 3Department of Information and Communications Engineering, School of Engineering, Tokyo Institute of Technology, Yokohama, Kanagawa, Japan
  • 4Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China
  • 5Department of Physical Therapy and Assistive Technology, National Yang Ming Chiao Tung University, Taiwan, China
  • 6Chinese Institute for Brain Research, Beijing, China
  • 7Beijing Institute of Brain Disorders, Beijing, China
  • 8China National Clinical Research Center for Neurological Diseases, Beijing, China

Objectives: The neural mechanism associated with impaired consciousness is not fully clear. We aim to explore the association between static and dynamic minimum spanning tree (MST) characteristics and neural mechanism underlying impaired consciousness.

Methods: MSTs were constructed based on full-length functional magnetic resonance imaging (fMRI) signals and fMRI signal segments within each time window. Global and local measures of static MSTs, as well as spatio-temporal interaction characteristics of dynamic MSTs were investigated.

Results: A disruption or an alteration in the functional connectivity, the decreased average coupling strength and the reorganization of hub nodes were observed in patients with minimally conscious state (MCS) and patients with vegetative state (VS). The analysis of global and local measures quantitatively supported altered static functional connectivity patterns and revealed a slower information transmission efficiency in both patient groups. From a dynamic perspective, the spatial distribution of hub nodes exhibited relative stability over time in both normal and patient populations. The increased temporal variability in multiple brain regions within resting-state networks associated with consciousness was detected in MCS patients and VS patients, especially thalamus. As well, the increased spatial variability in multiple brain regions within these resting-state networks was detected in MCS patients and VS patients. In addition, local measure and spatio-temporal variability analysis indicated that the differences in network structure between two groups of patients were mainly in frontoparietal network and auditory network.

Conclusion: Our findings suggest that altered static and dynamic MST characteristics may shed some light on neural mechanism underlying impaired consciousness.

1 Introduction

Brain injuries affect nearly half of the global population at some point in their lives (Jiang et al., 2019). Disorder of consciousness (DoC) (Fernandez-Espejo and Owen, 2013; Bernat, 2006) is a neurological dysfunction caused by severe brain injury which results in the inability of the body to recognize its surroundings and its own state in a continuous and organized manner. This condition may progress from a coma to a vegetative state (VS), a minimally conscious state (MCS), and eventually an emergence from MCS. The post-treatment and care of DoC patients remain significant challenges in the medical field.

Despite extensive research, the neural mechanism underpinning consciousness is not fully understood. Advancements in neuroimaging techniques and complex network theory have highlighted new possibilities for extracting consciousness-related biomarkers in DoC patients. Cognitive functions emerge from interactions between various brain regions. Complex network theory abstracts these regions and their interactions into nodes and connection edges, respectively. Abundant evidence suggests that DoC is associated with abnormal changes in brain networks (Crone et al., 2014; Rizkallah et al., 2019; Tan et al., 2019). The brain is dynamically changing. Dynamic brain connectivity is able to capture the time-varying characteristics of information interactions in the brain, compensating for the limitations of static brain connectivity. Recently, researchers have widely investigated on the dynamic brain connectivity associated with DoC patients using different approaches. The dynamic and time-resolved functional connectivity studies reports that there is a significant difference in the mean dwell time and number of transitions between the normal population and DoC patients (Cao et al., 2019), and VS patients exhibits decreased dwell time and loss of non-stationarity in default mode network (DMN) and subcortical frontoparietal-temporal network compared to MCS patients(Panda et al., 2022). This suggests that the network flexibility is reconfigured under the impact of DoC (Cai et al., 2020). A study based on a spatio-temporal causal interaction model points to a decreased ability in neural propagation and response to events in DoC patients (Panda et al., 2023). The authors believe disruption of information transmission in posterior cortical regions, along with reduced information broadcasting in subcortical, temporal, parietal, and frontal regions may contribute to loss of consciousness. Another study uses a whole-brain model based on a supercritical Hopf bifurcation (Lopez-Gonzalez et al., 2021; Perl et al., 2023) to interpret the dynamical effects that DoC patient exhibits less recurrent, less connected and more segregated synchronization patterns. Also, the turbulence approach (Escrichs et al., 2022) is introduced to examine dynamic brain connectivity in DoC patients.

Traditional network construction heavily relies on threshold selection, lacking a clear method to filter out spurious connections. The minimum spanning tree (MST) is an acyclic subgraph extracted from the original network, connecting all nodes with the minimum overall weight (Tewarie et al., 2015). MST is unique and represents the crucial skeleton structure of the original network. MST-based analysis avoids the threshold selection problem, standardizing the construction of brain networks. MST is vital for global network transmission (Van Mieghem and Magdalena, 2005; Van Mieghem and van Langen, 2005; Wang et al., 2008). Studies have substantiated that neuropsychiatric disorders lead to the disruption of the MST structure (Liu et al., 2021; Wang et al., 2018; Stam et al., 2014). However, there is a gap in understanding how impaired consciousness affects the MST structure. More, exploring the spatio-temporal interaction of dynamic MSTs in relation to consciousness becomes imperative.

This study constructs static and dynamic MSTs using resting-state functional magnetic resonance imaging (fMRI) signals acquired from 30 healthy subjects, 21 MCS patients and 66 VS patients. Then, static and dynamic MST characteristics are calculated for each group. Our main aim is to capture the abnormal brain activities induced by DoC through the altered network characteristics in an attempt to explain the neural mechanism behind impaired consciousness.

2 Materials and methods

2.1 Subjects

This study included a total of 140 DoC patients from the Department of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University. Each patient had received a severe brain damage for more than 1 month. All patients were assessed multiple times during the 2 weeks prior to baseline based on the Coma Recovery Scale-Revised. It was ultimately determined that 113 of these patients were in a VS and 27 were in an MCS. The fMRI data from 6 MCS patients and 47 VS patients were discarded due to brain damage exceeding 30% of the entire brain volume, excessive head movements, or poor image quality. Clinical details for the remaining 21 MCS patients (age = 40.14 ± 14.16, 13 male) and 66 VS patients (age = 41.42 ± 14.77, 40 male) are provided in Supplementary Table S1. 30 healthy subjects (age = 41.24 ± 11.27, 15 male) were recruited into the normal control (NC) group, ensuring age and gender matching. None had a history of neurological or psychiatric diseases. The Ethics Committee of Beijing Tiantan Hospital approved this study, and informed consent was obtained from each healthy volunteer and legal surrogate of each DoC patient (KY2023-161). During data acquisition, no sedative or anesthetic drugs were injected into the patients. Partial fMRI data have been used in our previous studies (Yang et al., 2023).

2.2 Data acquisition and preprocessing

A Discovery MR750 3.0-T scanner (General Electric, Milwaukee, Wisconsin, USA) was used to collect all images. fMRI images were obtained with the following parameters, volumes = 210, repetition time (TR)/echo time = 2000/30 ms, 39 slices, thickness/gap = 4.0/0.6 mm, voxel size = 3.75 × 3.75 × 4 mm3, flip angle = 90°, matrix size = 64 × 64, field of view = 240 × 240 mm. T1-weighted high-resolution structural images were also scanned so as to examine whether there were large brain aberrations or focal brain damage in the patients.

Data preprocessing, performed using Data Processing & Analysis for Brain Imaging Version 6.0210501 software package (Yan et al., 2016), included discarding the first 10 images, slice timing correction, realignment, co-registration of the functional images to the standard space of Montreal Neurological Institute, smoothing with a 4-mm full-width at half maximum Gaussian kernel, regression of nuisance signals and head motion parameters, and temporal filtering (0.01–0.1 Hz). Excessive head motion severely affects the quality of the signal, thus introducing complicated variations in the subsequent static and dynamic MST analysis. Therefore, framewise displacement >0.5 mm exceeding 50% led to the discarding of corresponding fMRI data.

2.3 The construction and analysis of static MSTs

The Automated Anatomical Labeling (AAL) atlas, parcellating the brain into 90 regions, was used to construct brain functional networks. Brain regions were mapped as nodes, each associated with a time series obtained by averaging time series of all voxels within the corresponding brain region. The coupling relationship between node pairs was measured by Pearson’s correlation coefficients, corrected by a Fisher’s r-to-z transformation. The static MSTs were computed from the static functional connectivity matrices, involving tasks such as discarding the negative elements and converting the connection weights to their reciprocals. Three local (degree, betweenness centrality, eccentricity) and four global (characteristic path length, diameter, leaf fraction, tree hierarchy) indicators were included to catch static MST characteristics in normal subjects and DoC patients.

The degree of a node is defined as the total number of all edges connected to that node. The Equation 1 is expressed as follows

ki=jV,jiaij    (1)

where ki denotes the degree of node i, aij denotes the link between node i and node j, V denotes the set of nodes.

Betweenness centrality is the proportion of shortest paths between all node pairs through a given node, which emphasizes the importance of a node in communication control. The Equation 2 is expressed as follows

BCi=1N1N2h,i,jV;hi,hj,ijρhjiρhj    (2)

where BCi represents the betweenness centrality of node i, ρhji represents the number of the shortest path between node h and node j passing through node i, ρhj represents the number of the shortest path between node h and node j, N represents to the total number of nodes.

The eccentricity of a node refers to the maximum value of the shortest path length from a given node to other nodes. The Equation 3 is as follows

Ecci=maxdij|jV    (3)

where Ecci refers to the eccentricity of node i, dij refers to the shortest path from node i to node j.

The characteristic path length is obtained by calculating the average shortest path length of all node pairs. The Equation 4 is expressed as follows.

Lp=1NN1ijdij    (4)

where Lp stands for characteristic path length.

The diameter of an MST is the longest shortest path length of all node pairs, or the maximum eccentricity. The Equation 5 is listed below

D=maxEcci|iV    (5)

where D indicates the diameter.

The leaf fraction indicates the rate of leaf nodes, which have only one link. The Equation 6 is shown as follows

Lf=LM    (6)

where Lf denotes the leaf fraction, L denotes the number of leaf nodes, M denotes the number of links.

The tree hierarchy was introduced to quantify information integration in and overload protection. The Equation 7 is listed as follows

TH=L2MBCmax    (7)

where TH represents the tree hierarchy, BCmax represents the maximum betweenness centrality. The tree hierarchy varies from 0 to 1. In a line-like MST, L=2. With M progressively approaching infinity, the tree hierarchy becomes closer to 0. In a star-like MST, LM, so the tree hierarchy is closer to 0.5. In a hierarchical MST, the tree hierarchy trends to 1. For more details on a star-like MST, a line-like MST, and a hierarchical MST, refer to the literatures (He et al., 2019; Blomsma et al., 2022; Tewarie et al., 2014).

2.4 The construction and analysis of dynamic MSTs

The dynamic brain functional network was estimated using a sliding window approach. A fixed-length time window (50 TR) intercepted signals along the time axis in a sliding step of 1 TR. Pearson’s correlation coefficients characterized the coupling relationships between the signal segments within each window, thus generating 151 functional connectivity matrices per subject. Likewise, these matrices underwent nonlinear correction with a Fisher’s r-to-z transformation.

Dynamic MSTs were derived from coupling relationships between signal segments within each time window, akin to static MST construction. Nodal degree was employed to identify hubs within each time window, exploring dynamic variability. Considering the brain’s inherent spatio-temporal interactions, temporal and spatial variability (Chu et al., 2023; Zhang et al., 2016) were introduced to examine altered neural activities in the context of impaired consciousness.

Assume that F=F1FrFv is the real functional connectivity architecture within v time windows derived from the dynamic MSTs. The temporal variability of a specific brain region can be calculated according to Equation 8

Ti=11vv1p,q=1;pqvcorrFpi:,Fqi:    (8)

where Fpi: reflects the coupling relationship between brain region i and other brain regions within the pth time window. Apparently, so is Fqi:. corrFpi:,Fqi: quantifies the temporal similarity in the functional connectivity architecture of brain region i within two different time windows.

The spatial functional connectivity sequence Fsij=F1ij,F2ij,,FvijT describes the changing profile of the coupling relationship between brain region i and brain region j over all time windows. The spatial variability of brain region i is expressed as Equation 9

Si=11N1N2j,h=1;jhiNcorrFsij,Fhih    (9)

where N denotes the number of brain regions. corrFsij,Fhih reveals the spatial similarity of two different spatial functional connectivity sequences associated with brain region i.

The main framework of the current study is summarized in Figure 1.

Figure 1
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Figure 1. The main framework of this study.

2.5 Statistical analysis

In this study, a nonparametric permutation test with 10,000 permutations (significance level 0.05) was employed to detecting statistical differences in static and dynamic characteristics between the normal population, MCS patients and VS patients. In addition, a false discovery rate (FDR) algorithm (significance level 0.05) was introduced to control the effects of multiple comparisons.

3 Results

3.1 Average coupling strength

The coupling strength of node pairs quantifies the interdependencies between brain regions, as expressed by the transformed Pearson’s correlation coefficient of the corresponding time series. The node coupling relationship of static MSTs extracted from the average functional connection matrices of the normal population, MCS patients and VS patients was shown in Figure 2A. We found a decrease in the average coupling strength of MCS patients and VS patients compared with normal individuals (p < 0.05, FDR corrected), whereas there was no difference in the average coupling strength between both groups (p > 0.05). This suggests that DoC may induce a weaker interdependence between brain regions. Further, the connection matrix was mapped into glass brain for better visualization, as shown in Figure 2B. Here, a disruption or an alteration in the functional connectivity of MCS patients and VS patients was intuitively observed.

Figure 2
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Figure 2. The node coupling relationship between brain regions and the critical network structures extracted based on static MSTs. (A) The connection matrix; (B) the brain functional network. In (A,B), the connection matrices and the network structures extracted based on static MSTs are shown from left to right for the normal population, MCS patients, and VS patients, respectively.

3.2 Static MST topology and critical brain regions

Using the connection pattern illustrated in Figure 2, we plotted the static MST topology for each group in Figure 3. It can be seen that, as in the normal population, the static MST topology of MCS patients and VS patients remains an intermediate configuration between a line-like and a star-like MST structure. This will be further elaborated in the analysis of the global measures.

Figure 3
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Figure 3. The topological structure of static MST in each group. (A) NC group; (B) MCS group; (C) VS group. The static MST topology of the normal population and patients is an intermediate configuration between a line-like and a star-like MST structure. A node, whose degree is at least one standard deviation greater than the mean, is considered as a hub node. In figure, the nodes with color close to fuchsia have more links and can be considered as hub nodes.

A highly connected node is usually considered to be a hub node of the network. In Figure 3, we depict the nodes with different colors and sizes in accordance with their degree. Nodes, labeled by AAL atlas abbreviations (provided in Supplementary Table S2), were scrutinized to identify the critical brain regions (generally its degree at least one standard deviation greater than the mean). Preliminarily, there were differences in the hub nodes not only between the normal population and the patients, but also between the MCS patients and the VS patients.

3.3 Global measures

To delve deeper into the impact of DoC, global measure changes in static MSTs were validated (Figure 4). The significant between-group differences were emphasized with asterisks. Compared to the normal population, 4 global measures were increased in MCS patients (p < 0.05, FDR corrected). The characteristic path length, leaf fraction and tree hierarchy were increased in VS patients (p < 0.05, FDR corrected), but diameter of VS patients was not different from that of the normal population (p > 0.05, FDR corrected). No difference was found between MCS patients and VS patients for each global measure (p > 0.05).

Figure 4
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Figure 4. Between-group differences in static MST global measures. (A) Characteristic path length; (B) diameter; (C) leaf fraction; (D) tree hierarchy. The increased characteristic path length, leaf fraction and tree hierarchy were observed in MCS patients and VS patients. The increased diameter was detected in MCS patients. *p < 0.05, FDR corrected; **p < 0.01, FDR corrected; *** p < 0.001, FDR corrected.

3.4 Local measures

The examination of local measures highlighted the subtle changes in brain activities of some specific brain regions caused by DoC, as illustrated in Figure 5. In Figure 5, the brain regions with no significant differences in local measures were marked with the smaller gray nodes. The brain regions with increased and decreased local measures were emphasized by the larger red and blue nodes, respectively. Compared to the normal population, the brain regions located in frontoparietal network (FPN), DMN, and auditory network (AUN) were detected to have an increased or decreased degree in MCS patients. The brain regions located in DMN and sensorimotor network (SMN) were detected to have an increased or decreased degree in VS patients. The brain regions located in FPN, AUN and DMN were detected to have an increased or decreased betweenness centrality in MCS patients. The brain regions located in cingulo-opercular network (CON) and DMN were detected to have a decreased betweenness centrality in VS patients. The brain regions mainly located in FPN, AUN, SMN, DMN, CON, and salience network (SN) were detected to have an increased eccentricity in MCS patients. The brain regions located in CON, FPN, DMN and subcortical network (SCN) were detected to have an increased eccentricity in VS patients. As for both groups of patients, the brain regions located in FPN were detected with decreased degree and betweenness centrality in VS patients. No difference in eccentricity was observed between the brain regions of MCS patients and those of VS patients. More details on the changes in local measures were summarized in Supplementary Tables S3.

Figure 5
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Figure 5. Between-group differences in static MST lobal measures. (A) Degree; (B) betweenness centrality; (C) eccentricity. In figure, from left to right, between-group comparison of local measures is shown for the normal population and MCS patients, the normal population and VS patients, as well as MCS patients and VS patients. The brain regions with decreased local measures (MCS < NC, VS < NC, and VS < MCS) are marked with larger blue nodes. The brain regions with increased local measures (MCS > NC, VS > NC, and VS > MCS) are marked with larger red nodes. The brain regions with no significant differences in local measures are marked with smaller gray nodes.

3.5 Dynamic variability of MST hubs

The hub nodes of the human brain play a crucial role in the information transmission between different brain regions. However, we still know little about the time-varying properties of hub nodes. Here, nodal degree within different time windows, mapped to the brain surface using the BrainNet Viewer (Xia et al., 2013) software package, provided insights into the spatial distribution of hub nodes over time. Figure 6 showed the spatial distribution of hub nodes in the normal population, MCS patients and VS patients within 8 different time windows in an interval of 20. The spatial distribution of hub nodes within each window was provided in Supplementary Figure S1. Surprisingly, the spatial distribution of hub nodes was relatively stable over time in each group.

Figure 6
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Figure 6. The stability of MST Hub nodes. The spatial distribution of hub nodes was plotted within 8 different time windows in an interval of 20 for the normal population, MCS patients and VS patients.

3.6 Temporal and spatial variability analysis

Brain is essentially organized into a network with spatio-temporal interaction characteristics. A meticulous investigation into the temporal and spatial variability may reveal the effects of DoC on this property of brain. Figures 7A, 8A showed the temporal and spatial variability across brain regions for each group. Figures 7B, 8B showed the differences in temporal and spatial variability between normal population and MCS patients, normal population and VS patients, and both groups of patients. The smaller gray nodes and larger red nodes indicate similar meanings as before. We identified an increase in temporal and spatial variability of multiple brain regions in MCS patients and VS patients in comparison with the normal population. Specifically, the alterations in temporal variability of MCS patients occurred within AUN, CON, DMN, SCN, FPN, SN, and visual network (VN), while the alterations in spatial variability of MCS patients occurred within DMN, SCN, and AUN. The alterations in temporal variability of VS patients occurred within AUN, CON, DMN, SCN, SN, and VN, while the alterations in spatial variability of VS patients occurred within DMN, SCN, SMN, VN, SN and AUN. Notably, increased temporal variability of the thalamus was detected in MCS patients and VS patients. With regard to the two groups of patients, we observed increased temporal and spatial variability in brain regions within AUN in VS patients. More details on the changes in temporal and spatial variability were provided in Supplementary Tables S3.

Figure 7
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Figure 7. Between-group comparison in temporal variability. (A) The temporal variability across brain regions in the normal population, MCS patients and MCS patients; (B) between-group comparison in temporal variability. The brain regions with increased temporal variability (MCS > NC, VS > NC, and VS > MCS) are marked with larger red nodes. The brain regions with no significant differences in temporal variability are marked with smaller gray nodes.

Figure 8
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Figure 8. Between-group comparison in spatial variability. (A) The spatial variability across brain regions in the normal population, MCS patients and MCS patients; (B) between-group comparison in spatial variability. The brain regions with increased spatial variability (MCS > NC, VS > NC, and VS > MCS) are marked with larger red nodes The brain regions with no significant differences in spatial variability are marked with smaller gray nodes.

4 Discussion

Here, we expanded the detailed results to provide a nuanced and comprehensive understanding of the altered brain connectivity patterns in DoC patients, thereby shedding light on potential avenues for further research and clinical interventions.

MST has been confirmed to be a critical backbone for global information transmission. Between-group comparison in average coupling strength obtained using static MSTs showed consistent findings with the previous studies based on original network (Wang et al., 2018). This provides some evidence that static MST method is reliable in disentangling network-level dysregulations for DoC like original network. In addition, the attenuation in coupling strength and the disruption or alteration in functional connectivity may point to widespread alterations in neural communication of MCS patients and VS patients.

The topological analysis (Figure 3) reveals several intriguing features. In healthy brains, hub nodes identified based on static MSTs are much the same as those found based on original network (van den Heuvel et al., 2018; Oldham and Fornito, 2019). Once again, the reliability of MST-based analysis was verified. Despite the fact that static MST topology of MCS patients and VS patients is still an intermediate configuration between a line-like and a star-like MST structure, DoC resulted in a reorganization of the hub nodes. This directly affects the way brain regions interact with each other and may be an important reason for consciousness loss. Although the phenomenon was found in original network (Achard et al., 2012), it is the first time that the reorganization of the hub nodes in DoC patients is discussed based on MST. These preliminary observations were then further refined in the analysis of degrees.

Quantitative assessment of changes in topological structure is facilitated by the analysis of global and local measures (Figures 4, 5). The increased characteristic path length in MCS patients and VS patients potentially contributes to difficulties in information exchange between brain regions and indicates a diminished ability for functional integration (Rizkallah et al., 2019; Chennu et al., 2017). Previously, we also observed this alteration in original network (Yang et al., 2023). This illustrates that, despite discarding many details, the essential changes in network structure caused by DoC are still preserved on the MST. Similarly, as a measure of distance, an increase in diameter underscores the challenges in efficient information transmission between remote brain regions. As a side note, we detected a larger diameter in VS patients than in the normal population. However, FDR correction diluted this difference so that in the end only MCS patients had larger diameters than the normal population. Definitely, the information transmission is most efficient in the normal population, even between remote brain regions. The increased leaf fraction implies some nodes are less important in MCS patients and VS patients. Although different, the tree hierarchy in the normal population and DoC patients ranges from 0 to 0.5, which quantitatively confirms that their static MSTs were intermediate configurations.

Earlier, we explore hub nodes using nodal degree. Statistical tests showed that degree of the brain regions situated within FPN, DMN and AUN was significantly different between the normal population and MCS patients. This suggests that the reorganization of hub nodes in MCS patients may occur in FPN, DMN and AUN. Similarly, the reorganization of hub nodes in VS patients may occur in DMN and SMN. The betweenness centrality of a node quantifies its ability for communication control over other brain regions. Compared to the normal population, we detected changes in this ability of brain regions within FPN, AUN and DMN in MCS patients, and of brain regions located in CON and DMN in VS patients. The eccentricity of a node quantifies the transmission efficiency between that node and the most distant node reachable by it. The increased eccentricity of brain regions within FPN, AUN, SMN, DMN, CON, and SN in MCS patients, and of brain regions within CON, FPN, DMN and SCN in VS patients indicates a slower information transmission between these brain regions and the most distant brain regions reachable by them. Resting-state networks such as DMN, FPN and SN are intricately linked to cognitive control (Menon and D’Esposito, 2022; Menon, 2023) and consciousness (Vincent et al., 2007; Horovitz et al., 2008; Larson-Prior et al., 2009; Demertzi et al., 2014; Wu et al., 2015; Qin et al., 2015; Fischer et al., 2016). These changes in local measures highlight the intricate nature of the impact of DoC on specific resting-state networks.

Even though brain activity changed dynamically over time, the spatial distribution of hub nodes was relatively stable across multiple epochs (~100 s) within a continuous state (Figure 6). This stability is well supported by previous test–retest reliability studies (Tomasi et al., 2017; Mueller et al., 2015; Noble et al., 2017; Noble et al., 2017) and dynamic brain network-based research (Li et al., 2020), emphasizing the robustness of higher-order association regions, especially those within DMN. Exploring the factors contributing to this stability, even in the case of impaired consciousness in MCS patients and VS patients, opens avenues for exploring the resilience and adaptability of the human brain. However, our current understanding about this stability of functional organization is very limited.

Our findings support increased temporal variability in brain regions belonging to AUN, CON, DMN, SCN, FPN, SN, and VN in MCS patients, and in brain regions belonging to AUN, CON, DMN, SCN, SN, and VN in VS patients. Temporal variability sheds light on the extent to which the connectivity patterns of specific brain regions change over time. The high temporal variability suggests strong node flexibility and unstable connectivity patterns. The increased spatial variability was found in brain regions belonging to DMN, SCN, and AUN in MCS patients, and in brain regions belonging to DMN, SCN, SMN, VN, SN and AUN in VS patients. The spatial variability portrays the similarity in the time sequences of all functional connectivity linked to specific brain region. The high spatial variability indicates that all functional connectivity sequences associated with this brain region were fairly independent. This phenomenon is not unique to DoC. Previous study has revealed lower temporal variability in DMN regions in patients with schizophrenia, but higher temporal variability in DMN regions in patients with autism/attention deficit hyperactivity disorder (Zhang et al., 2016). The increased temporal and spatial variability in specific brain regions within critical resting-state networks of MCS patients and VS patients may provide a new clue to explaining consciousness loss.

Generally, the integrity of thalamo-cortical and cortico-cortical connectivity is considered to be necessary for the existence of awareness. The thalamus’s role as a gateway for transmitting sensory signals to the cortex underscores its importance in maintaining wakefulness and awareness (Lemaire et al., 2022; Malekmohammadi et al., 2019). The increased temporal variability in thalamus may add a new perspective to our understanding of altered consciousness in MCS patients and VS patients.

We identified that the hub nodes of MCS patients and VS patients are somewhat differentiated. The analysis of nodal degree suggests that MCS patients and VS patients may have differential hub nodes within the FPN. Interestingly, we again identified brain regions within FPN in MCS patients have a stronger ability in communication control over other brain regions than in VS patients. Several studies have shown differences in brain activity in the frontoparietal region between MCS patients and VS patients. This supports our findings to a certain extent. The observed difference in temporal and spatial variability between MCS patients and VS patients was reflected in AUN. MCS patients have a higher level of auditory and language function compared to VS patients. The differences in temporal and spatial variability within AUN between MCS patients and VS patients may benefit from this. Overall, the differences in functional connectivity between the two groups of patients focused on the node level. Despite the similarity of brain activity at the global level between MCS patients and VS patients (a slower transmission efficiency, a decreased ability for functional integration, etc.), differences in functional connectivity at the nodal level may provide some explanation for the preservation of limited consciousness in MCS patients.

Acknowledging the limitations of the study is crucial for a comprehensive interpretation of the findings. All our findings are still obtained based on a dataset with a small sample size. A small sample size and the high individual variability may introduce challenges in achieving robust statistical findings. Future research should focus on a dataset with more adequate samples to enhance the generalizability of the observed patterns. Furthermore, the utilization of the AAL brain template for dividing brain regions may introduce inaccuracies in matching resting-state networks, such as DMN, FPN and SN, etc. The research incorporating more refined brain templates and advanced neuroimaging techniques may well capture more nuanced changes.

5 Conclusion

In summary, our in-depth discussion delves into various facets of the results, emphasizing the multifaceted impact of DoC on functional connectivity. This study not only furthers our understanding of the neural mechanism underlying impaired consciousness but also may identify potential markers for diagnostic and therapeutic exploration. The limitations outlined provide valuable insights for the design of future studies, ensuring a more comprehensive exploration for DoC.

Data availability statement

Data are not publicly available but are available from the corresponding author on reasonable request.

Ethics statement

The studies involving humans were approved by Beijing Tiantan Hospital, Capital Medical University. The studies were conducted in accordance with the local legislation and institutional requirements. The participants provided their written informed consent to participate in this study.

Author contributions

YD: Conceptualization, Data curation, Formal analysis, Investigation, Writing – original draft, Writing – review & editing. QH: Conceptualization, Data curation, Writing – review & editing. SW: Data curation, Writing – review & editing. TC: Data curation, Writing – review & editing. XC: Data curation, Writing – review & editing. NW: Data curation, Writing – review & editing. YD: Data curation, Writing – review & editing. PW: Data curation, Writing – review & editing. JH: Conceptualization, Supervision, Writing – review & editing. FD: Supervision, Writing – review & editing. YY: Conceptualization, Funding acquisition, Project administration, Supervision, Writing – review & editing.

Funding

The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This work was supported in part by National Natural Science Foundation of China (No. 81600919), Science and Technology Innovation 2030-Young Scientists Project of Brain Science and brain-like Research (No. 2022ZD0205300), International (Hong Kong, Macao, and Taiwan) Science and Technology Cooperation Project (No. Z221100002722014), 2022 Open Project of Key Laboratory and Engineering Technology Research Center in the Rehabilitation Field of the Ministry of Civil Affairs (No. 2022GKZS0003), Chinese Institute for Brain Research Youth Scholar Program (No. 2022-NKX-XM-02), Beijing Natural Science Foundation (No. 7232049), the National Natural Science Foundation of China (Key Program) (No. 11932013), the Tianjin Science and Technology Plan Project (No. 22PTZWHZ00040), and Tianjin Research Innovation Project for Postgraduate Students (No. 2021YJSO2B01).

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

Supplementary material

The Supplementary material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fpsyg.2024.1458339/full#supplementary-material

References

Achard, S., Delon-Martin, C., Vertes, P. E., Renard, F., Schenck, M., Schneider, F., et al. (2012). Hubs of brain functional networks are radically reorganized in comatose patients. Proc. Natl Acad Sci U. S. A. 109, 20608–20613. doi: 10.1073/pnas.1208933109

PubMed Abstract | Crossref Full Text | Google Scholar

Bernat, J. L. (2006). Chronic disorders of consciousness. Lancet 367:2060.

Google Scholar

Blomsma, N., de Rooy, B., Gerritse, F., van der Spek, R., Tewarie, P., Hillebrand, A., et al. (2022). Minimum spanning tree analysis of brain networks: a systematic review of network size effects, sensitivity for neuropsychiatric pathology, and disorder specificity. Netw Neurosci. 6, 301–319. doi: 10.1162/netn_a_00245

PubMed Abstract | Crossref Full Text | Google Scholar

Cai, L. H., Wei, X. L., Wang, J., Yi, G. S., Lu, M. L., and Dong, Y. Q. (2020). Characterization of network switching in disorder of consciousness at multiple time scales. J. Neural Eng. 17:026024. doi: 10.1088/1741-2552/ab79f5

PubMed Abstract | Crossref Full Text | Google Scholar

Cao, B. L., Chen, Y., Yu, R. H., Chen, L. X., Chen, P., Weng, Y. H., et al. (2019). Abnormal dynamic properties of functional connectivity in disorders of consciousness. NeuroImage Clin. 24:102071. doi: 10.1016/j.nicl.2019.102071

Crossref Full Text | Google Scholar

Chennu, S., Annen, J., Wannez, S., Thibaut, A., Chatelle, C., Cassoi, H., et al. (2017). Brain networks predict metabolism, diagnosis and prognosis at the bedside in disorders of consciousness. Brain 140, 2120–2132. doi: 10.1093/brain/awx163

PubMed Abstract | Crossref Full Text | Google Scholar

Chu, C. G., Zhang, Z., Wang, J., Li, Z., Shen, X., Han, X. X., et al. (2023). Temporal and spatial variability of dynamic microstate brain network in early Parkinson’s disease. NPJ Parkinsons Dis. 9:57. doi: 10.1038/s41531-023-00498-w

PubMed Abstract | Crossref Full Text | Google Scholar

Crone, J. S., Soddu, A., Holler, Y., Vanhaudenhuyse, A., Schurz, M., Bergmann, J., et al. (2014). Altered network properties of the fronto-parietal network and the thalamus in impaired consciousness. Neuroimage-Clin. 4, 240–248. doi: 10.1016/j.nicl.2013.12.005

PubMed Abstract | Crossref Full Text | Google Scholar

Demertzi, A., Gómez, F., Crone, J. S., Vanhaudenhuyse, A., Tshibanda, L., Noirhomme, Q., et al. (2014). Multiple fMRI system-level baseline connectivity is disrupted in patients with consciousness alterations. Cortex 52, 35–46. doi: 10.1016/j.cortex.2013.11.005

PubMed Abstract | Crossref Full Text | Google Scholar

Escrichs, A., Perl, Y. S., Uribe, C., Camara, E., Turker, B., Pyatigorskaya, N., et al. (2022). Unifying turbulent dynamics framework distinguishes different brain states. Commun Biol. 5:638. doi: 10.1038/s42003-022-03576-6

PubMed Abstract | Crossref Full Text | Google Scholar

Fernandez-Espejo, D., and Owen, A. M. (2013). Detecting awareness after severe brain injury. Nat. Rev. Neurosci. 14, 801–809. doi: 10.1038/nrn3608

Crossref Full Text | Google Scholar

Fischer, D. B., Boes, A. D., Demertzi, A., Evrard, H. C., Laureys, S., Edlow, B. L., et al. (2016). A human brain network derived from coma-causing brainstem lesions. Neurology 87, 2427–2434. doi: 10.1212/WNL.0000000000003404

PubMed Abstract | Crossref Full Text | Google Scholar

He, W., Sowman, P. F., Brock, J., Etchell, A. C., Stam, C. J., and Hillebrand, A. (2019). Increased segregation of functional networks in developing brains. NeuroImage 200, 607–620. doi: 10.1016/j.neuroimage.2019.06.055

Crossref Full Text | Google Scholar

Horovitz, S. G., Fukunaga, M., de Zwart, J. A., van Gelderen, P., Fulton, S. C., Balkin, T. J., et al. (2008). Low frequency BOLD fluctuations during resting wakefulness and light sleep: a simultaneous EEG-fMRI study. Hum. Brain Mapp. 29, 671–682. doi: 10.1002/hbm.20428

PubMed Abstract | Crossref Full Text | Google Scholar

Jiang, J. Y., Gao, G. Y., Feng, J. F., Mao, Q., Chen, L. G., Yang, X. F., et al. (2019). Traumatic brain injury in China. Lancet Neurol. 18, 286–295. doi: 10.1016/S1474-4422(18)30469-1

Crossref Full Text | Google Scholar

Larson-Prior, L. J., Zempel, J. M., Nolan, T. S., Prior, F. W., Snyder, A. Z., and Raichle, M. E. (2009). Cortical network functional connectivity in the descent to sleep. Proc. Natl. Acad. Sci. U. S. A. 106, 4489–4494. doi: 10.1073/pnas.0900924106

PubMed Abstract | Crossref Full Text | Google Scholar

Lemaire, J. J., Pontier, B., Chaix, R., El Ouadih, Y., Khalil, T., Sinardet, D., et al. (2022). Neural correlates of consciousness and related disorders: from phenotypic descriptors of behavioral and relative consciousness to cortico-subcortical circuitry. Neurochirurgie 68, 212–222. doi: 10.1016/j.neuchi.2021.05.003

PubMed Abstract | Crossref Full Text | Google Scholar

Li, L., Lu, B., and Yan, C. G. (2020). Stability of dynamic functional architecture differs between brain networks and states. NeuroImage 216:116230. doi: 10.1016/j.neuroimage.2019.116230

PubMed Abstract | Crossref Full Text | Google Scholar

Liu, X. Y., Yang, H., Becker, B., Huang, X. Q., Luo, C., Meng, C., et al. (2021). Disentangling age- and disease-related alterations in schizophrenia brain network using structural equation modeling: a graph theoretical study based on minimum spanning tree. Hum. Brain Mapp. 42, 3023–3041. doi: 10.1002/hbm.25403

PubMed Abstract | Crossref Full Text | Google Scholar

Lopez-Gonzalez, A., Panda, R., Ponce-Alvarez, A., Zamora-Lopez, G., Escrichs, A., Martial, C., et al. (2021). Loss of consciousness reduces the stability of brain hubs and the heterogeneity of brain dynamics. Commun Biol. 4:1037. doi: 10.1038/s42003-021-02537-9

PubMed Abstract | Crossref Full Text | Google Scholar

Malekmohammadi, M., Price, C. M., Hudson, A. E., DiCesare, J. A. T., and Pouratian, N. (2019). Propofol-induced loss of consciousness is associated with a decrease in thalamocortical connectivity in humans. Brain 142, 2288–2302. doi: 10.1093/brain/awz169

PubMed Abstract | Crossref Full Text | Google Scholar

Menon, V. (2023). 20 years of the default mode network: a review and synthesis. Neuron 111, 2469–2487. doi: 10.1016/j.neuron.2023.04.023

PubMed Abstract | Crossref Full Text | Google Scholar

Menon, V., and D’Esposito, M. (2022). The role of PFC networks in cognitive control and executive function. Neuropsychopharmacology 47, 90–103. doi: 10.1038/s41386-021-01152-w

PubMed Abstract | Crossref Full Text | Google Scholar

Mueller, S., Wang, D. H., Fox, M. D., Pan, R. Q., Lu, J., Li, K. C., et al. (2015). Reliability correction for functional connectivity: theory and implementation. Hum. Brain Mapp. 36, 4664–4680. doi: 10.1002/hbm.22947

PubMed Abstract | Crossref Full Text | Google Scholar

Noble, S., Scheinost, D., Finn, E. S., Shen, X. L., Papademetris, X., McEwen, S. C., et al. (2017). Multisite reliability of MR-based functional connectivity. NeuroImage 146, 959–970. doi: 10.1016/j.neuroimage.2016.10.020

PubMed Abstract | Crossref Full Text | Google Scholar

Noble, S., Spann, M. N., Tokoglu, F., Shen, X. L., Constable, R. T., and Scheinost, D. (2017). Influences on the test-retest reliability of functional connectivity MRI and its relationship with behavioral utility. Cereb. Cortex 27, 5415–5429. doi: 10.1093/cercor/bhx230

PubMed Abstract | Crossref Full Text | Google Scholar

Oldham, S., and Fornito, A. (2019). The development of brain network hubs. Dev Cogn Neuros-Neth. 36:100607. doi: 10.1016/j.dcn.2018.12.005

Crossref Full Text | Google Scholar

Panda, R., Lopez-Gonzalez, A., Gilson, M., Gosseries, O., Thibaut, A., Frasso, G., et al. (2023). Whole-brain analyses indicate the impairment of posterior integration and thalamo-frontotemporal broadcasting in disorders of consciousness. Hum. Brain Mapp. 44, 4352–4371. doi: 10.1002/hbm.26386

PubMed Abstract | Crossref Full Text | Google Scholar

Panda, R., Thibaut, A., Lopez-Gonzalez, A., Escrichs, A., Bahri, M. A., Hillebrand, A., et al. (2022). Disruption in structural-functional network repertoire and time-resolved subcortical fronto-temporoparietal connectivity in disorders of consciousness. eLife 11:11. doi: 10.7554/eLife.77462

Crossref Full Text | Google Scholar

Perl, Y. S., Pallavicini, C., Piccinini, J., Demertzi, A., Bonhomme, V., Martial, C., et al. (2023). Low-dimensional organization of global brain states of reduced consciousness. Cell Rep. 42:112491. doi: 10.1016/j.celrep.2023.112491

PubMed Abstract | Crossref Full Text | Google Scholar

Qin, P. M., Wu, X. H., Huang, Z. R., Duncan, N. W., Tang, W. J., Wolff, A., et al. (2015). How are different neural networks related to consciousness? Ann. Neurol. 78, 594–605. doi: 10.1002/ana.24479

Crossref Full Text | Google Scholar

Rizkallah, J., Annen, J., Modolo, J., Gosseries, O., Benquet, P., Mortaheb, S., et al. (2019). Decreased integration of EEG source-space networks in disorders of consciousness. NeuroImage Clin. 23:101841. doi: 10.1016/j.nicl.2019.101841

Crossref Full Text | Google Scholar

Stam, C. J., Tewarie, P., Van Dellen, E., van Straaten, E. C. W., Hillebrand, A., and Van Mieghem, P. (2014). The trees and the forest: characterization of complex brain networks with minimum spanning trees. Int. J. Psychophysiol. 92, 129–138. doi: 10.1016/j.ijpsycho.2014.04.001

PubMed Abstract | Crossref Full Text | Google Scholar

Tan, X. F., Zhou, Z., Gao, J., Meng, F. X., Yu, Y. M., Zhang, J., et al. (2019). Structural connectome alterations in patients with disorders of consciousness revealed by 7-tesla magnetic resonance imaging. NeuroImage Clin. 22:101702. doi: 10.1016/j.nicl.2019.101702

Crossref Full Text | Google Scholar

Tewarie, P., Hillebrand, A., Schoonheim, M. M., van Dijk, B. W., Geurts, J. J. G., Barkhof, F., et al. (2014). Functional brain network analysis using minimum spanning trees in multiple sclerosis: an MEG source-space study. NeuroImage 88, 308–318. doi: 10.1016/j.neuroimage.2013.10.022

Crossref Full Text | Google Scholar

Tewarie, P., van Dellen, E., Hillebrand, A., and Stam, C. J. (2015). The minimum spanning tree: an unbiased method for brain network analysis. NeuroImage 104, 177–188. doi: 10.1016/j.neuroimage.2014.10.015

PubMed Abstract | Crossref Full Text | Google Scholar

Tomasi, D. G., Shokri-Kojori, E., and Volkow, N. D. (2017). Temporal evolution of brain functional connectivity metrics: could 7 min of rest be enough? Cereb. Cortex 27, 4153–4165. doi: 10.1093/cercor/bhw227

PubMed Abstract | Crossref Full Text | Google Scholar

van den Heuvel, M. I., Turk, E., Manning, J. H., Hect, J., Hernandez-Andrade, E., Hassan, S. S., et al. (2018). Hubs in the human fetal brain network. Dev Cogn Neuros-Neth. 30, 108–115. doi: 10.1016/j.dcn.2018.02.001

PubMed Abstract | Crossref Full Text | Google Scholar

Van Mieghem, P., and Magdalena, S. M. (2005). Phase transition in the link weight structure of networks. Phys. Rev. E 72:056138. doi: 10.1103/PhysRevE.72.056138

Crossref Full Text | Google Scholar

Van Mieghem, P., and van Langen, S. (2005). Influence of the link weight structure on the shortest path. Phys. Rev. E 71:056113. doi: 10.1103/PhysRevE.71.056113

Crossref Full Text | Google Scholar

Vincent, J. L., Patel, G. H., Fox, M. D., Snyder, A. Z., Baker, J. T., Van Essen, D. C., et al. (2007). Intrinsic functional architecture in the anaesthetized monkey brain. Nature 447, 83–86. doi: 10.1038/nature05758

PubMed Abstract | Crossref Full Text | Google Scholar

Wang, H. J., Hernandez, J. M., and Van Mieghem, P. (2008). Betweenness centrality in a weighted network. Phys. Rev. E 77:046105. doi: 10.1103/PhysRevE.77.046105

Crossref Full Text | Google Scholar

Wang, B., Miao, L. W., Niu, Y., Cao, R., Li, D. D., Yan, P. F., et al. (2018). Abnormal functional brain networks in mild cognitive impairment and Alzheimer’s disease: a minimum spanning tree analysis. J. Alzheimers Dis. 65, 1093–1107. doi: 10.3233/JAD-180603

PubMed Abstract | Crossref Full Text | Google Scholar

Wu, X. H., Zou, Q. H., Hu, J., Tang, W. J., Mao, Y., Gao, L., et al. (2015). Intrinsic functional connectivity patterns predict consciousness level and recovery outcome in acquired brain injury. J. Neurosci. 35, 12932–12946. doi: 10.1523/JNEUROSCI.0415-15.2015

PubMed Abstract | Crossref Full Text | Google Scholar

Xia, M., Wang, J., and He, Y. (2013). BrainNet viewer: a network visualization tool for human brain Connectomics. PLoS One 8:e68910. doi: 10.1371/journal.pone.0068910

Crossref Full Text | Google Scholar

Yan, C. G., Wang, X. D., Zuo, X. N., and Zang, Y. F. (2016). DPABI: Data Processing & Analysis for (resting-state) brain imaging. Neuroinformatics 14, 339–351. doi: 10.1007/s12021-016-9299-4

Crossref Full Text | Google Scholar

Yang, Y., Dai, Y. Y., He, Q. H., Wang, S., Chen, X. L., Geng, X. L., et al. (2023). Altered brain functional connectivity in vegetative state and minimally conscious state. Front. Aging Neurosci. 15:15. doi: 10.3389/fnagi.2023.1213904

Crossref Full Text | Google Scholar

Zhang, J., Cheng, W., Liu, Z. W., Zhang, K., Lei, X., Yao, Y., et al. (2016). Neural, electrophysiological and anatomical basis of brain-network variability and its characteristic changes in mental disorders. Brain 139, 2307–2321. doi: 10.1093/brain/aww143

PubMed Abstract | Crossref Full Text | Google Scholar

Keywords: disorders of consciousness, minimum spanning tree, static functional connectivity, dynamic functional connectivity, consciousness-related neural mechanism

Citation: Dai Y, He Q, Wang S, Cao T, Chai X, Wang N, Dong Y, Wong P, He J, Duan F and Yang Y (2024) Deciphering network dysregulations and temporo-spatial dynamics in disorders of consciousness: insights from minimum spanning tree analysis. Front. Psychol. 15:1458339. doi: 10.3389/fpsyg.2024.1458339

Received: 15 July 2024; Accepted: 20 November 2024;
Published: 19 December 2024.

Edited by:

Poppy L. A. Schoenberg, Vanderbilt University Medical Center, United States

Reviewed by:

Xiaochu Zhang, University of Science and Technology of China, China
Rajanikant Panda, University of California, San Francisco, United States

Copyright © 2024 Dai, He, Wang, Cao, Chai, Wang, Dong, Wong, He, Duan and Yang. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

*Correspondence: Feng Duan, ZHVhbmZAbmFua2FpLmVkdS5jbg==; Yi Yang, eWFuZ3lpXzgxbmtAMTYzLmNvbQ==

These authors have contributed equally to this work and share first authorship

Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.