Frontiers in Plant Science | Plant Bioinformatics

Original Research

Published on 31 Jul 2024

Successful development of molecular diagnostic technology combining mini-barcoding and high-resolution melting for traditional Chinese medicine agarwood species based on single-nucleotide polymorphism in the chloroplast genome

in Plant Bioinformatics

Jian Feng
Yangyang Liu
Anzhen Xie
Yun Yang
Feifei Lv
Jianhe Wei

Frontiers in Plant Science

doi 10.3389/fpls.2024.1405168

1,340 views

Original Research

Published on 31 Jul 2024

Organ-specific transcriptional regulation by HFR1 and HY5 in response to shade in Arabidopsis

in Plant Bioinformatics

Ian Kin Yuen Choi
Amit Kumar Chaturvedi
Benny Jian Rong Sng
Kien Van Vu
In-Cheol Jang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1430639

1,856 views
1 citation

Original Research

Published on 30 Jul 2024

Genome-wide identification and expression analysis of the U-box E3 ubiquitin ligase gene family related to bacterial wilt resistance in tobacco (Nicotiana tabacum L.) and eggplant (Solanum melongena L.)

in Plant Bioinformatics

Rui Chen
Gang Gu
Binghui Zhang
Chaofan Du
Xiaolu Lin
Weiwei Cai
Yan Zheng
Tong Li
Ruiqi Wang
Xiaofang Xie

Frontiers in Plant Science

doi 10.3389/fpls.2024.1425651

1,894 views

Methods

Published on 26 Jul 2024

Deep learning-based elaiosome detection in milk thistle seed for efficient high-throughput phenotyping

in Plant Bioinformatics

Younguk Kim
Alebel Mekuriaw Abebe
Jaeyoung Kim
Suyoung Hong
Kwanghoon An
Jeehyoung Shim
Jeongho Baek

Frontiers in Plant Science

doi 10.3389/fpls.2024.1395558

1,049 views
1 citation

Original Research

Published on 23 Jul 2024

The impact of retrotransposons on castor bean genomes

in Plant Bioinformatics

Lin Kong
Tingting Zhang
Lei Ma

Frontiers in Plant Science

doi 10.3389/fpls.2024.1397215

1,283 views

Original Research

Published on 22 Jul 2024

Analyzing the defense response mechanism of Atractylodes macrocephala to Fusarium oxysporum through small RNA and degradome sequencing

in Plant Bioinformatics

Sen Fan
Yunjia Tang
Na Zhu
Qingling Meng
Yanguang Zhou
Yujin Zhao
Jingyan Xu
Chenxian Gu
Shijie Dai
Bo Zhu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1415209

1,320 views

Review

Published on 18 Jul 2024

Understanding grain development in the Poaceae family by comparing conserved and distinctive pathways through omics studies in wheat and maize

in Plant Bioinformatics

Yuanyuan Ji
Thulani Hewavithana
Andrew G. Sharpe
Lingling Jin

Frontiers in Plant Science

doi 10.3389/fpls.2024.1393140

1,793 views

Original Research

Published on 17 Jul 2024

Formation mechanism and regulation analysis of trumpet leaf in Ginkgo biloba L

in Plant Bioinformatics

Xin-hui Li
Xiao-jing Kang
Xin-yue Zhang
Li-ning Su
Xing Bi
Rui-long Wang
Shi-yan Xing
Li-min Sun

Frontiers in Plant Science

doi 10.3389/fpls.2024.1367121

1,366 views

Opinion

Published on 11 Jul 2024

Seeing in the dark: a metagenomic approach can illuminate the drivers of plant disease

in Plant Bioinformatics

Veronica Roman-Reyna
Sharifa G. Crandall

Frontiers in Plant Science

doi 10.3389/fpls.2024.1405042

2,778 views
1 citation

Original Research

Published on 08 Jul 2024

Genome-wide identification of the CAD gene family and functional analysis of putative bona fide CAD genes in tobacco (Nicotiana tabacum L.)

in Plant Bioinformatics

Mingzhu Wu
Yijun Li
Zhengtai Liu
Lin Xia
Yiyu Xiang
Lijie Zhao
Xiaobei Yang
Zefeng Li
Xiaodong Xie
Lin Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1400213

2,157 views
3 citations

Original Research

Published on 27 Jun 2024

Genome-wide identification, characterization, and evolutionary analysis of the barley TALE gene family and its expression profiles in response to exogenous hormones

in Plant Bioinformatics

Tian-jiang Liao
Tao Huang
Hui-yan Xiong
Jie-cuo Duo
Jian-zhi Ma
Ming-yang Du
Rui-jun Duan

Frontiers in Plant Science

doi 10.3389/fpls.2024.1421702

1,559 views
1 citation

Original Research

Published on 26 Jun 2024

Characterization of the SWI/SNF complex and nucleosome organization in sorghum

in Plant Bioinformatics

Xiaofei Chen
Chao He
Huan Xu
Gongjian Zeng
Quanjun Huang
Zhuying Deng
Xiner Qin
Xiangling Shen
Yongfeng Hu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1430467

1,903 views

Original Research

Published on 11 Jun 2024

Comparative transcriptome analysis reveals the potential mechanism of GA3-induced dormancy release in Suaeda glauca black seeds

in Plant Bioinformatics

Hongfei Wang
Tianjiao Xu
Yongjia Li
Rui Gao
Xuelin Tao
Jieqiong Song
Changping Li
Qiuli Li

Frontiers in Plant Science

doi 10.3389/fpls.2024.1354141

2,008 views
3 citations

Original Research

Published on 05 Jun 2024

A systems genomics and genetics approach to identify the genetic regulatory network for lignin content in Brassica napus seeds

in Plant Bioinformatics

Wentao Zhang
Erin E. Higgins
Stephen J. Robinson
Wayne E. Clarke
Kerry Boyle
Andrew G. Sharpe
Pierre R. Fobert
Isobel A. P. Parkin

Frontiers in Plant Science

doi 10.3389/fpls.2024.1393621

1,516 views

Correction

Published on 05 Jun 2024

Corrigendum: LocoGSE, a sequence-based genome size estimator for plants

in Plant Bioinformatics

Pierre Guenzi-Tiberi
Benjamin Istace
Inger Greve Alsos
The PhyloNorway Consortium
Eric Coissac
Sébastien Lavergne
The PhyloAlps Consortium
Jean-Marc Aury
France Denoeud

Frontiers in Plant Science

doi 10.3389/fpls.2024.1426035

613 views

Original Research

Published on 28 May 2024

Identification and expression profiling of SmGATA genes family involved in response to light and phytohormones in eggplant

in Plant Bioinformatics

Yanyan Wang
Xinyun Li
Yunrong Mo
Caiqian Jiang
Ying Zhou
Jingyi Hu
Youling Zhang
Junheng Lv
Kai Zhao
Zhenya Lu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1415921

1,098 views
2 citations