Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 27 Mar 2025

Peanut leaf transcriptomic dynamics reveals insights into the acclimation response to elevated carbon dioxide under semiarid conditions

in Functional and Applied Plant Genomics

Haydee Laza
Bishwoyog Bhattarai
Venugopal Mendu
Mark D. Burow
Yves Emendack
Jacobo Sanchez
Aarti Gupta
Mostafa Abdelrahman
Lam-Son Phan Tran
David T. Tissue

Frontiers in Plant Science

doi 10.3389/fpls.2024.1407574

688 views

Original Research

Published on 26 Mar 2025

Comprehensive genome analysis of Streptomyces caeruleatus S14 isolated from rice rhizosphere

in Functional and Applied Plant Genomics

Sucharita Mohapatra
S. R. Prabhukarthikeyan
Gayatri Biswal
Mihira Kumara Mishra
Soumya Shephalika Dash
Gyanisha Nayak
U. Keerthana
C. Parameswaran
P. Panneerselvam
S. D. Mohapatra

Frontiers in Plant Science

doi 10.3389/fpls.2025.1526700

599 views

Original Research

Published on 26 Mar 2025

Phenotypic adaptation and genomic variation of Kandelia obovata associated with its northern introduction along southeastern coast of China

in Functional and Applied Plant Genomics

Jiaqi Zhang
Sheng Ouyang
Xingxing Cai
Sheng Yang
Qiuxia Chen
Ji Yang
Zhiping Song
Wenju Zhang
Yuguo Wang
Yan Zhu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1512620

368 views

Data Report

Accepted on 25 Mar 2025

Transcriptome Map and Genome Annotation of Flax Line 3896

in Functional and Applied Plant Genomics

Daiana Zhernova
Alexander A. Arkhipov
Tatiana A. Rozhmina
Alexander A. Zhuchenko
Nadezhda Bolsheva
Elizaveta Sigova
Ekaterina Dvorianinova
Elena Vladimirovna Borkhert
Elena Pushkova
Nataliya V. Melnikova

Frontiers in Plant Science

doi 10.3389/fpls.2025.1520832

135 views

Original Research

Published on 12 Mar 2025

Synergy of osmotic adjustment and antioxidant activity in Catalpa bungei: alleviating persistent drought stress from SL to NSL

in Functional and Applied Plant Genomics

Xiaochi Yu
Junhui Wang
Wenjun Ma
Fei Yi
Peng Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1536795

375 views

Original Research

Published on 07 Mar 2025

Profiling of rhizosphere-associated microbial communities in North Alabama soils infested with varied levels of reniform nematodes

in Functional and Applied Plant Genomics

Sowndarya Karapareddy
Varsha C. Anche
Sowjanya R. Tamatamu
Madhusudhana R. Janga
Kathy Lawrence
Leopold M. Nyochembeng
Antonette Todd
Lloyd T. Walker
Venkateswara R. Sripathi

Frontiers in Plant Science

doi 10.3389/fpls.2025.1521579

653 views
1 citation

Data Report

Published on 05 Mar 2025

Chromosome-level assembly of the Isodon lophanthoides genome

in Functional and Applied Plant Genomics

Yubang Gao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1528404

500 views

Data Report

Published on 04 Mar 2025

Genetic diversity of Hippophae rhamnoides varieties with different fruit characteristics based on whole-genome sequencing

in Functional and Applied Plant Genomics

Nataliya V. Melnikova
Alexander A. Arkhipov
Yury A. Zubarev
Roman O. Novakovskiy
Anastasia A. Turba
Elena N. Pushkova
Daiana A. Zhernova
Anna S. Mazina
Ekaterina M. Dvorianinova
Elizaveta A. Sigova

Frontiers in Plant Science

doi 10.3389/fpls.2025.1542552

595 views

Original Research

Published on 04 Mar 2025

Single-cell RNA sequencing of shoot apex reveals the mechanism of cyclin regulating cell division via auxin signaling pathway in Populus alba

in Functional and Applied Plant Genomics

Jing-hui Liang
Zhao-qun Wu
Yue-Xuan Zhang
Ye-Bo Yang
Shi-Yi Wang
Meng-Yu Gai
Yu-Wen Wang
Xiu-Xing Zhang
Jing Xue
Bo-Hao Duan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1555388

905 views

Original Research

Published on 28 Feb 2025

Transcriptomic analysis of two Chinese wheat landraces with contrasting Fusarium head blight resistance reveals miRNA-mediated defense mechanisms

in Functional and Applied Plant Genomics

Lijuan Wu
Junqiang Wang
Shian Shen
Zaijun Yang
Xinkun Hu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1537605

817 views

Original Research

Published on 26 Feb 2025

Integrated transcriptome and metabolome analyses reveals the mechanisms of function loss of Lr29 leaf rust resistance gene at high temperatures in wheat

in Functional and Applied Plant Genomics

Liwen Wang
Yang Yu
Hang Li
Mingzhu Lu
Shubo Cao
Ziqi Li
Haoyuan Song
Laszlo Purnhauser
Jinlong Li
Jiajie Wu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1537921

592 views

Original Research

Published on 26 Feb 2025

Genome-wide analysis of OPR family genes in Vitis vinifera and the role of VvOPR1 in copper, zinc tolerance

in Functional and Applied Plant Genomics

Shuang-Hong You
Yuan-Ping Chen
Wen-Jing Shi
Xue Li
Zheng Wu
Quan-Hong Yao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1509472

670 views

Original Research

Published on 20 Feb 2025

Transcriptomic analysis of early stages of ‘Candidatus Liberibacter asiaticus’ infection in susceptible and resistant species after inoculation by Diaphorina citri feeding on young shoots

in Functional and Applied Plant Genomics

Mônica N. Alves
Juan Cifuentes-Arenas
Regina Niñoles
Laudecir Lemos Raiol-Junior
Everton Carvalho
Isabel Quirós-Rodriguez
Jesus A. Ferro
Concetta Licciardello
Berta Alquezar
Lourdes Carmona

Frontiers in Plant Science

doi 10.3389/fpls.2025.1502953

827 views

Review

Published on 19 Feb 2025

Recent advances in understanding the mechanisms of plant cadmium accumulation as affected by grafting in vegetable production

in Functional and Applied Plant Genomics

Ruimin Zhang
Youzhou Zhu
Hong Li
Na Sun

Frontiers in Plant Science

doi 10.3389/fpls.2025.1526041

628 views
1 citation

Original Research

Published on 18 Feb 2025

AoMYB114 transcription factor regulates anthocyanin biosynthesis in the epidermis of tender asparagus stems

in Functional and Applied Plant Genomics

Yanwen Li
Mengyao Li
Zheng Guo
Junting Liu
Peiran Chen
Wei Lu
Chengyao Jiang
Jiachang Xiao
Fengyun Lei
Yangxia Zheng

Frontiers in Plant Science

doi 10.3389/fpls.2025.1531574

601 views

Original Research

Published on 18 Feb 2025

TAL-SRX: an intelligent typing evaluation method for KASP primers based on multi-model fusion

in Functional and Applied Plant Genomics

Xiaojing Chen
Jingchao Fan
Shen Yan
Longyu Huang
Guomin Zhou
Jianhua Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1539068

373 views