Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Accepted on 18 Apr 2025

Genome-wide identification and development of SSR molecular markers for genetic diversity studies in Ilex asprella

in Functional and Applied Plant Genomics

Jingchun Li
Changqian Quan
Rongchang Wei
Fan Wei
Qing Ma
Yuquan Huang
Meihua Xu
Danfeng Tang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1582154

Original Research

Accepted on 18 Apr 2025

Genome-wide Identification of the HD-ZIP IV Gene Family in Pogostemon cablin and Its Association with Glandular Hair Development

in Functional and Applied Plant Genomics

Shuqi Xie
Yilin Li
Huiting Liao
Wenyi Chen
Yuqi Zhang
Xiaoming Yan
Hongyi Zhang
Mengling He
Hanjing Yan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1580351

Original Research

Accepted on 18 Apr 2025

Intensifying cropping sequences in the US Central Great Plains: An in-silico analysis of a sorghum-wheat sequence

in Functional and Applied Plant Genomics

Lucia Marziotte
Ana Carcedo
Daniel Rodriguez
Laura Mayor
P. V. Vara Prasad
Ignacio Antonio Ciampitti

Frontiers in Plant Science

doi 10.3389/fpls.2025.1525128

Original Research

Published on 17 Apr 2025

Identification of novel candidate genes for regulating oil composition in soybean seeds under environmental stresses

in Functional and Applied Plant Genomics

Patrick Bewick
Peter Forstner
Bo Zhang
Eva Collakova

Frontiers in Plant Science

doi 10.3389/fpls.2025.1572319

380 views

Original Research

Published on 16 Apr 2025

Genotyping and diversity analysis of local avocado landraces in La Palma, Canary Islands

in Functional and Applied Plant Genomics

Verónica Pérez
Nerea Larranaga
M. Librada Alcaraz
J. Ignacio Hormaza

Frontiers in Plant Science

doi 10.3389/fpls.2025.1572870

551 views

Original Research

Accepted on 15 Apr 2025

StSN2 enhances tuber formation in potato via upregulating of the ABA signaling pathway

in Functional and Applied Plant Genomics

Shifeng Liu
Luopin Li
Lang Yan
Xiyao Wang
Qiang Wang
Xianjun Lai

Frontiers in Plant Science

doi 10.3389/fpls.2025.1566237

Original Research

Published on 15 Apr 2025

Consensus genomic regions and key genes for biotic, abiotic and key nutritional traits identified using meta- QTL analysis in peanut

in Functional and Applied Plant Genomics

Aakash Sahu
Sagar Krushnaji Rangari
Yogesh Dashrath Naik
Anjali Jyotish
Manish K. Pandey
Rajeev K. Varshney
Mahendar Thudi
Somashekhar M. Punnuri

Frontiers in Plant Science

doi 10.3389/fpls.2025.1539641

463 views

Original Research

Published on 14 Apr 2025

Uncovering the breeding contribution of transposable elements from landraces to improved varieties through pan-genome-wide analysis in rice

in Functional and Applied Plant Genomics

Xiaoxia Li
Xiaofan Dai
Huiying He
Wu Chen
Qian Qian
Lianguang Shang
Longbiao Guo
Wenchuang He

Frontiers in Plant Science

doi 10.3389/fpls.2025.1573546

499 views

Editorial

Accepted on 10 Apr 2025

Editorial

in Functional and Applied Plant Genomics

Huatao Chen
Li Song
Henry T Nguyen
Donghe Xu
Chengfu Su

Frontiers in Plant Science

doi 10.3389/fpls.2025.1578039

Original Research

Accepted on 07 Apr 2025

Genome-Wide Analysis of the Laccase Gene Family in Tossa Jute (Corchorus olitorius): Insights into Stem Development, Lignification, and Responses to Abiotic Stress

in Functional and Applied Plant Genomics

Deepak Kumar Jha
Subhadarshini Parida
Seema Pradhan
Nrisingha Dey
Shuvobrata Majumder

Frontiers in Plant Science

doi 10.3389/fpls.2025.1568674

203 views

Original Research

Published on 04 Apr 2025

GWAS and WGCNA analysis uncover candidate genes associated with drought in Brassica juncea L.

in Functional and Applied Plant Genomics

Yusong Zhang
Xiaoyan Yuan
Yunyun Zhang
Yanqing Luo
Kaiqin Zhao
Feng Zu
Zhengshu Tian
Jinfeng Li
Lifan Zhang
Xiaoying He

Frontiers in Plant Science

doi 10.3389/fpls.2025.1551804

454 views

Original Research

Accepted on 01 Apr 2025

Prolonged heat stress in Brassica napus during flowering negatively impacts yield and alters glucosinolate and sugars metabolism

in Functional and Applied Plant Genomics

Mariam Kourani
Maria Anastasiadi
John Hammond
Fady Mohareb

Frontiers in Plant Science

doi 10.3389/fpls.2025.1507338

Original Research

Accepted on 01 Apr 2025

Identification and characterization of Csa-miR159s and their expression patterns under different abiotic stresses in Cucumber (Cucumis sativus L.)

in Functional and Applied Plant Genomics

Zhenxiang Zhao
Wenhong Ao
Weirong Luo
Yaoguang Sun
Vijay Yadav Tokala
Junjun Liu
Shenshen Zhi
Yongdong Sun

Frontiers in Plant Science

doi 10.3389/fpls.2025.1518406

Original Research

Published on 01 Apr 2025

Screening and functional characterization of salt-tolerant NAC gene family members in Medicago sativa L

in Functional and Applied Plant Genomics

Zhiguang Li
Qianqian Yu
Yue Ma
Fuhong Miao
Lichao Ma
Shuo Li
Huajie Zhang
Zeng-Yu Wang
Guofeng Yang
Kunlong Su

Frontiers in Plant Science

doi 10.3389/fpls.2025.1461735

469 views

Original Research

Published on 28 Mar 2025

Evolutionary landscape of plant chalcone isomerase-fold gene families

in Functional and Applied Plant Genomics

Kai-yong Luo
Shi-ping Wang
Ling Yang
Sen-lin Luo
Jia Cheng
Yang Dong
Ya Ning
Wei-bin Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1559547

608 views

Original Research

Accepted on 27 Mar 2025

QTL Mapping of Flowering Time in Brassica napus: A Study on the Interplay between Temperature and Day Length after Vernalization

in Functional and Applied Plant Genomics

Eva Heinrich
Antje Schierholt
Christian Möllers

Frontiers in Plant Science

doi 10.3389/fpls.2025.1513353