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ORIGINAL RESEARCH article

Front. Pharmacol.
Sec. Pharmacology of Anti-Cancer Drugs
Volume 15 - 2024 | doi: 10.3389/fphar.2024.1477363

Development and validation of a programmed cell death index to predict the prognosis and drug sensitivity of gastric cancer

Provisionally accepted
  • Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China

The final, formatted version of the article will be published soon.

    Aim: Programmed cell death (PCD) critically influences the tumor microenvironment (TME) and is intricately linked to tumor progression and patient prognosis. This study aimed to develop a novel prognostic indicator and marker of drug sensitivity in patients with gastric cancer (GC) based on PCD.We analyzed genes associated with 14 distinct PCD patterns using bulk transcriptome data and clinical information from TCGA-STAD for model construction with univariate Cox regression and LASSO regression analyses. Microarray data from GSE62254, GSE15459, and GSE26901 were used for validation. Single-cell transcriptome data from GSE183904 were analyzed to explore the relationship between TME and the newly constructed model, named PCD index (PCDI). Drug sensitivity comparisons were made between patients with high and low PCDI scores.We developed a novel twelve-gene signature called PCDI. Upon validation, GC patients with higher PCDI scores had poorer prognoses. A high-performance nomogram integrating the PCDI with clinical features was also established.Additionally, single-cell transcriptome data analysis suggested that PCDI might be linked to critical components of the TME. Patients with high PCDI scores exhibited resistance to standard adjuvant chemotherapy and immunotherapy but might benefit from targeted treatments with NU7441, Dasatinib, and JQ1.The novel PCDI model shows significant potential in predicting clinical prognosis and drug sensitivity of GC, thereby facilitating personalized treatment strategies for patients with GC.

    Keywords: gastric cancer, programmed cell death, Prognostic model, drug sensitivity, Tumor Microenvironment

    Received: 07 Aug 2024; Accepted: 02 Dec 2024.

    Copyright: © 2024 Lin, Chen, Liang, Zhang, Chen, Zheng, Huang, Wei, Zhao, Zhang, Chen, Ruan, Chen, Nie, Li and Zhao. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence:
    Ruopeng Zhang, Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China
    Chengzhi Wei, Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China
    Zhoukai Zhao, Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China
    Shenghang Ruan, Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China
    Yongming Chen, Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China
    Run-Cong Nie, Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China
    Yuan-Fang Li, Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China
    Baiwei Zhao, Sun Yat-sen University Cancer Center (SYSUCC), Guangzhou, China

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.