Original Research

Published on 22 Jul 2024

Integrated metabolomics and transcriptomics analysis reveals the mechanism of Tangbi capsule for diabetic lower extremities arterial disease

in Systems Microbiology

Ye-hao Luo
Da-wei Wang
Jia Yao
Yue Hu
Ling Zhao
Jian-xuan Wen
Jin-ming Zhang
Lu-Lu Wu
Guan-jie Fan
Wei Song

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1423428

1,684 views

Original Research

Published on 19 Jul 2024

Benchmarking of five NGS mapping tools for the reference alignment of bacterial outer membrane vesicles-associated small RNAs

in Systems Microbiology

Bojana Banović Đeri
Sofija Nešić
Ivan Vićić
Jelena Samardžić
Dragana Nikolić

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1401985

1,691 views

Original Research

Published on 18 Jul 2024

Gut microbiota causally affects drug-induced liver injury via plasma metabolites: a Mendelian randomization study

in Systems Microbiology

Haoshuang Fu
Shuang Zhao
Shuying Song
Qing Xie

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1432049

1,861 views

Original Research

Published on 17 Jul 2024

The effect of gut microbiome and plasma metabolome on systemic sclerosis: a bidirectional two-sample Mendelian randomization study

in Systems Microbiology

Shasha Xie
Qiming Meng
Lin Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1427195

1,269 views

Editorial

Published on 17 Jul 2024

Editorial: Combining machine learning, computational modeling, and high throughput experimentation to accelerate discovery in systems microbiology

in Systems Microbiology

Miguel Fuentes-Cabrera
Paolo Zuliani
Bowen Li
Jared L. Wilmoth
Aivett Bilbao
Alice C. Dohnalkova

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1451243

660 views

Original Research

Published on 16 Jul 2024

Age-correlated changes in the canine oral microbiome

in Systems Microbiology

Gregory Kislik
Lin Zhou
Liudmilla Rubbi
Matteo Pellegrini

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1426691

1,406 views

Original Research

Published on 15 Jul 2024

Gut microbiota, plasma metabolites, and osteoporosis: unraveling links via Mendelian randomization

in Systems Microbiology

Yi Lu
Xiaobing Cai
Baohua Shi
Haitao Gong

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1433892

2,486 views
2 citations

Original Research

Published on 12 Jul 2024

Causal effects of gut microbiota on risk of interstitial cystitis: a two-sample Mendelian randomization study

in Systems Microbiology

Jianguo Gao
Sihai Shao
Yuefan Shen

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1434117

1,404 views

Original Research

Published on 12 Jul 2024

The causal relationship between gut microbiota and alopecia areata: a Mendelian randomization analysis

in Systems Microbiology

Dezhao Bi
Jin Tong Tey
Dan Yao
Yutian Cao
Minyu Qian
Jianxin Shi
Shun Guo

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1431646

1,945 views

Editorial

Published on 10 Jul 2024

Editorial: Untangle the broad connections and tight interactions between human microbiota and complex diseases through data-driven approaches, volume II

in Systems Microbiology

Qi Zhao
Zuo-Bin Zhu
Jian Li
Li Zhang
Liang Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1449474

535 views

Original Research

Published on 03 Jul 2024

Viability-PCR for the selective detection of Lactobacillus acidophilus and Bifidobacterium bifidum in live bacteria-containing products

in Systems Microbiology

Stefania Catone
Serena Iannantuono
Domenico Genovese
Christina Von Hunolstein
Giovanna Franciosa

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1400529

1,300 views

Review

Published on 19 Jun 2024

Microbiome modeling: a beginner's guide

in Systems Microbiology

Emanuel Lange
Lena Kranert
Jacob Krüger
Dirk Benndorf
Robert Heyer

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1368377

3,354 views

Original Research

Published on 19 Jun 2024

Proof of concept: real-time viability and metabolic profiling of probiotics with isothermal microcalorimetry

in Systems Microbiology

Carlotta Morazzoni
Madle Sirel
Serena Allesina
Marta Veses Garcia
Kasper Kragh
Marco Pane
Katrin Beilharz

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1391688

1,164 views
1 citation

Original Research

Published on 12 Jun 2024

Specific cultivation-independent enumeration of viable cells in probiotic products using a combination of fluorescence in situ hybridization and flow cytometry

in Systems Microbiology

Laura Snaidr
Peter Mühlhahn
Claudia Beimfohr
Christian Kreuzer
Carolin Richly
Jiri Snaidr

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1410709

2,084 views

Original Research

Published on 04 Jun 2024

Genetically supported causality between gut microbiota, immune cells, and ischemic stroke: a two-sample Mendelian randomization study

in Systems Microbiology

Han Shuai
Zi Wang
Yinggang Xiao
Yali Ge
Hua Mao
Ju Gao

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1402718

1,726 views
1 citation

Original Research

Published on 03 Jun 2024

Explainable artificial intelligence and microbiome data for food geographical origin: the Mozzarella di Bufala Campana PDO Case of Study

in Systems Microbiology

Michele Magarelli
Pierfrancesco Novielli
Francesca De Filippis
Raffaele Magliulo
Pierpaolo Di Bitonto
Domenico Diacono
Roberto Bellotti
Sabina Tangaro

Frontiers in Microbiology

doi 10.3389/fmicb.2024.1393243

992 views

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Articles

Integrated metabolomics and transcriptomics analysis reveals the mechanism of Tangbi capsule for diabetic lower extremities arterial disease

Benchmarking of five NGS mapping tools for the reference alignment of bacterial outer membrane vesicles-associated small RNAs

Gut microbiota causally affects drug-induced liver injury via plasma metabolites: a Mendelian randomization study

The effect of gut microbiome and plasma metabolome on systemic sclerosis: a bidirectional two-sample Mendelian randomization study

Editorial: Combining machine learning, computational modeling, and high throughput experimentation to accelerate discovery in systems microbiology

Age-correlated changes in the canine oral microbiome

Gut microbiota, plasma metabolites, and osteoporosis: unraveling links via Mendelian randomization

Causal effects of gut microbiota on risk of interstitial cystitis: a two-sample Mendelian randomization study

The causal relationship between gut microbiota and alopecia areata: a Mendelian randomization analysis

Editorial: Untangle the broad connections and tight interactions between human microbiota and complex diseases through data-driven approaches, volume II

Viability-PCR for the selective detection of Lactobacillus acidophilus and Bifidobacterium bifidum in live bacteria-containing products

Microbiome modeling: a beginner's guide

Proof of concept: real-time viability and metabolic profiling of probiotics with isothermal microcalorimetry

Specific cultivation-independent enumeration of viable cells in probiotic products using a combination of fluorescence in situ hybridization and flow cytometry

Genetically supported causality between gut microbiota, immune cells, and ischemic stroke: a two-sample Mendelian randomization study

Explainable artificial intelligence and microbiome data for food geographical origin: the Mozzarella di Bufala Campana PDO Case of Study