Frontiers in Microbiology | Systems Microbiology

Systematic Review

Accepted on 15 Apr 2025

Systematic Review of Gut Microbiota Composition, Metabolic Alterations, and the Effects of Treatments on PCOS and Gut Microbiota Across Human and Animal Studies

in Systems Microbiology

Aya Hanna
Hassan Abbas
Fayez Yassine
Alia Albush
Melhem Bilen

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1549499

Original Research

Accepted on 14 Apr 2025

Unveiling the Impact of 16S rRNA Gene Intergenomic Variation on Primer Design and Gut Microbiome Profiling

in Systems Microbiology

Sirinthorn Sunthornthummas
Rujipat Wasitthankasem
Pimonwan Phokhaphan
Nirinya Sudtachat
Alisa Wilantho
Chumpol Ngamphiw
Wanwisa Chareanchim
Sissades Tongsima

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1573920

Original Research

Accepted on 10 Apr 2025

Phylogenetic diversity and community structure of Planctomycetota from plant biomass-rich environments

in Systems Microbiology

Dominika Klimek
Olga Lage
Magdalena Calusinska

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1579219

109 views

Original Research

Accepted on 10 Apr 2025

Colonizable probiotic Lactobacillus paracasei R3 enhances ICI therapy via modulating PBMCs differentiation

in Systems Microbiology

Wencan Song
Jizhen Liu
Jingfang Yang
Tao Chen
Jiayi Zhu
Xia Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1547964

119 views

Opinion

Published on 10 Apr 2025

Navigating microbiome variability: implications for research, diagnostics, and direct-to-consumer testing

in Systems Microbiology

Lorenzo Drago

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1580531

729 views

Original Research

Published on 09 Apr 2025

Gut microbiome signature in response to neoadjuvant chemoradiotherapy in patients with rectal cancer

in Systems Microbiology

Tingmei Duan
Zhengting Ren
Haili Jiang
Yan Ding
Hongyan Wang
Fan Wang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1543507

424 views

Systematic Review

Published on 08 Apr 2025

Gut microbiota and gastrointestinal tumors: insights from a bibliometric analysis

in Systems Microbiology

Chaofan Chen
Xiaolan Wang
Xu Han
Lifan Peng
Zhiyun Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1558490

219 views

Original Research

Accepted on 04 Apr 2025

Two new species of Cortinarius (Cortinariaceae, Agaricales) from Southern China

in Systems Microbiology

Yuxiao Dang
Mengjia Zhu
Nemat O Keyhani
Ziyi Wu
Chenghao Qiu
Jinming Xiong
Huili Pu
Longbing Lin
Chengjie Xiong
Zhiying Zhao

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1558935

172 views

Original Research

Published on 01 Apr 2025

Identifying phage Lysins through genomic analysis of prophages from Acinetobacter baumannii

in Systems Microbiology

Maria Leonor Raposo
Ana Carolina Pimentel
Vera Manageiro
Aida Duarte
Manuela Caniça
Filipa F. Vale

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1532950

646 views

Original Research

Published on 01 Apr 2025

Comparative genomic and phenotypic description of Escherichia ruysiae: a newly identified member of the gut microbiome of the domestic dog

in Systems Microbiology

Niokhor Dione
Kodjovi D. Mlaga
Siyi Liang
Guillaume Jospin
Zara Marfori
Nancy Alvarado
Elisa Scarsella
Ruchita Uttarwar
Holly H. Ganz

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1558802

591 views

Original Research

Published on 28 Mar 2025

A species-level identification pipeline for human gut microbiota based on the V3-V4 regions of 16S rRNA

in Systems Microbiology

Min Wang
Tingting Yuan
Jiali Chen
Jing Yang
Ji Pu
Wenchao Lin
Kui Dong
Luqing Zhang
Jiale Yuan
Han Zheng

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1553124

629 views

Original Research

Published on 27 Mar 2025

Dry ginger and Schisandra chinensis modulate intestinal flora and bile acid metabolism to treatment asthma

in Systems Microbiology

Yantong Yu
Shuang Geng
Chao Bu
Gang Cao
Yanquan Han
Dongmei Xie
Yan Hong

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1541335

883 views

Original Research

Accepted on 26 Mar 2025

Diversity in the Composition of Pleural Cavity and Oral Cavity Microbiota in Different Bacterial Empyema

in Systems Microbiology

Yun Huang
Qing-Hua Gao
Chen-Jian Liu
Ting Su
Jie Liu
Zheng-Yi Liang
Zheng-Ju zhao
Li-Ping Chen
Yong-Ning Yi
Xiao-Ran Li

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1566606

130 views

Original Research

Published on 26 Mar 2025

Gene network centrality analysis identifies key regulators coordinating day-night metabolic transitions in Synechococcus elongatus PCC 7942 despite limited accuracy in predicting direct regulator-gene interactions

in Systems Microbiology

Zachary Johnson
David Anderson
Margaret S. Cheung
Pavlo Bohutskyi

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1569559

595 views

Original Research

Accepted on 24 Mar 2025

Urinary and oral microbiota from participants in a pilot case-control study of breast cancer in Polish women

in Systems Microbiology

Anna Marciniak
Marzena Skrzypczak-Zielinska
Oliwia Zakerska-Banaszak
Elżbieta Nowakowska
Anna Kozaczka
Brunon Zemła
Andrzej Szpak
Dariusz Godlewski
Jadwiga Charzewska
Dorothy Pathak

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1538224

106 views

Original Research

Published on 21 Mar 2025

FACdb: a comprehensive resource for genes, gut microbiota, and metabolites in farm animals

in Systems Microbiology

Ze Zhang
Yang Li
Di Zhang
Shuai Chen
Sien Lu
Kang Wang
Miao Zhou
Zehe Song
Qingcui Li
Jie Yin

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1557285

2,194 views