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ORIGINAL RESEARCH article

Front. Mol. Neurosci., 16 February 2023
Sec. Brain Disease Mechanisms
This article is part of the Research Topic Global Excellence in Brain Disease Mechanisms: Asia & Australasia View all 8 articles

Age-differential sexual dimorphisms in CHD8-S62X-mutant mouse synapses and transcriptomes

  • 1Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, Republic of Korea
  • 2Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Republic of Korea
  • 3Division of National Supercomputing, Korea Institute of Science and Technology Information, Daejeon, Republic of Korea

Chd8+/N2373K mice with a human C-terminal-truncating mutation (N2373K) display autistic-like behaviors in juvenile and adult males but not in females. In contrast, Chd8+/S62X mice with a human N-terminal-truncating mutation (S62X) display behavioral deficits in juvenile males (not females) and adult males and females, indicative of age-differential sexually dimorphic behaviors. Excitatory synaptic transmission is suppressed and enhanced in male and female Chd8+/S62X juveniles, respectively, but similarly enhanced in adult male and female mutants. ASD-like transcriptomic changes are stronger in newborn and juvenile (but not adult) Chd8+/S62X males but in newborn and adult (not juvenile) Chd8+/S62X females. These results point to age-differential sexual dimorphisms in Chd8+/S62X mice at synaptic and transcriptomic levels, in addition to the behavioral level.

Introduction

Mutations of CHD8, encoding a chromatin remodeler, have been extensively associated with autism spectrum disorders (ASD; Bernier et al., 2014; Barnard et al., 2015; Dingemans et al., 2022; Zhou et al., 2022). Human individuals carrying CHD8 mutations show a strong male–female ratio (~85:15; Stessman et al., 2017), suggesting that CHD8 could be one of the ideal targets for studying the mechanisms underlying male–female differences in ASD.

Previous studies on Chd8-mutant mice and human neurons suggested multiple mechanisms that may underlie CHD8-related brain deficits (Sugathan et al., 2014; Cotney et al., 2015; Wang et al., 2015; Breuss and Gleeson, 2016; Durak et al., 2016; Katayama et al., 2016; Gompers et al., 2017; Platt et al., 2017; Wang et al., 2017; Andreae and Basson, 2018; Jung et al., 2018; Suetterlin et al., 2018; Wade et al., 2018; Xu et al., 2018; Zhao et al., 2018; Hulbert et al., 2020; Jimenez et al., 2020; Sood et al., 2020; Cherepanov et al., 2021; Ding et al., 2021; Ellingford et al., 2021; Hurley et al., 2021; Kawamura et al., 2021; Kweon et al., 2021; Weissberg and Elliott, 2021; Chen et al., 2022; Coakley-Youngs et al., 2022; Dong et al., 2022; Haddad Derafshi et al., 2022; Jimenez et al., 2022; Kerschbamer et al., 2022; Lee et al., 2022; Paulsen et al., 2022; Thudium et al., 2022; Tu et al., 2022; Villa et al., 2022; Yu et al., 2022; Hayot et al., 2023). However, mechanisms underlying the male–female differences in CHD8-related ASD are poorly understood (Jung et al., 2018; Cherepanov et al., 2021; Yu et al., 2022).

Chd8+/N2373K mice that carry a human mutation that leads to a C-terminal protein truncation (N2373K; O’Roak et al., 2012; Merner et al., 2016) display male-preponderant behavioral deficits as juveniles and adults. In contrast, Chd8+/S62X mice expressing CHD8-S62X proteins with N-terminal truncation (O’Roak et al., 2012) display behavioral deficits in juvenile males (not females) and adult males and females (Lee et al., 2022), indicative of age-differential sexually dimorphic behaviors. Here, we characterized and compared synaptic and transcriptomic phenotypes in male and female Chd8+/S62X mice at juvenile and adult stages, which led us to find age-differential sexual dimorphisms at synaptic and transcriptomic levels additional to the behavioral level.

Materials and methods

Animals

Chd8+/S62X mice have been recently reported (Lee et al., 2022). Mice were maintained at the Korea Advanced Institute of Science and Technology (KAIST) mouse facility (12-h light–dark cycle).

Electrophysiology

Electrophysiology was performed using mouse brain slices containing the dorsal hippocampus, a brain region associated with ASD (Schumann et al., 2004), from juvenile mice at P21–28 and adult mice at 9–18 weeks. Isoflurane-anesthetized mice were used to dissect brains, which were placed in a chamber containing dissection buffer (In mM: 212 sucrose, 25 NaHCO3, 1.25 NaH2PO4, 5 KCl, 3.5 MgCl2, 0.5 CaCl2, 10 D-glucose, 2 sodium pyruvate, 1.2 sodium ascorbate, 95% O2, and 5% CO2) and used to obtain sagittal slices (300 μm; ~1–2 slices/mice) using a vibratome; exact numbers of mice and neurons used for each experiment are described in the figure legends. Slices containing the dorsal hippocampus were recovered in the artificial cerebrospinal fluid (aCSF; in mM: 125 NaCl, 25 NaHCO3, 1.25 NaH2PO4, 2.5 KCl, 1.3 MgCl2, 2.5 CaCl2, 10 D-glucose) at 32°C for 30 and 60 min (juvenile and adult, respectively) and at 20°C–25°C for 30 min, followed by a transfer to a recording chamber at 28°C with circulating aCSF. sEPSCs were measured in the presence of picrotoxin (60 μM; Sigma), and mEPSCs were measured in the presence of picrotoxin (60 μM) and tetrodotoxin (0.5 μM; Tocris). sIPSCs were measured in the presence of NBQX (10 μM; Tocris) and D-AP5 (50 μM; Tocris). mIPSCs were measured in the presence of NBQX (10 μM), D-AP5 (50 μM), and tetrodotoxin (0.5 μM). Recording pipettes (2.0~3.5 MΩ resistance) were pulled from borosilicate capillaries (thin-walled, 30-0065, Harvard Apparatus) using a two-step vertical micropipette puller (PC-10, Narishige). The pipette-filling solution for sEPSC and mEPSC recordings contained (in mM) 117 CsMeSO4, 8 NaCl, 10 TEACl, 10 EGTA, 10 HEPES, 4 Mg-ATP, 0.3 Na-GTP, and 5 QX-314, and the solution for sIPSC and mIPSC recordings contained (in mM) 115 CsCl, 8 NaCl, 10 TEACl, 10 EGTA, 10 HEPES, 4 Mg-ATP, 0.3 Na-GTP, and 5 QX-314. For giga sealing, neurons were approached with the internal solution-filled pipette and gently ruptured through suction. Membrane voltages were held at −70 mV, and recordings were obtained after cells were perfused with aCSF and stabilized (2 min). Signals were filtered (2 kHz) and digitized (10 kHz) using Multiclamp 700B amplifier and Digidata 1,550 digitizer (Molecular Devices). The access resistance, checked before and after recordings, was used to exclude data when it is >20 MΩ. Acquired data were analyzed using Clampfit 10 (Molecular Devices).

RNA-Seq analysis

Three mice aged P0, P25, and P80 were used for each group (heterozygous, wildtype, male, female). Brains were quickly dissected and deep-freezed in RNAlater solution (Ambion) to stabilize RNAs. RNA extraction, library preparation, cluster generation, and sequencing were conducted by Macrogen. Sequencing was performed with an average read depth of 70 to 90 million reads at paired-ends (2 × 101 bp) using an Illumina HiSeq 4000 (Illumina) via Macrogen Inc. Transcript abundance was estimated in pseudo-mapping-based mode for the Mus musculus genome (GRCm38) using Salmon (v1.1.0; Patro et al., 2017). Differential gene expression analysis was performed using R/Bioconductor DEseq2 (v1.26.0; Love et al., 2014) by importing the estimated abundance data into R (v.3.5.3) using the tximport (Soneson et al., 2015) package. The p-values were adjusted for multiple testing with the Benjamini–Hochberg correction. A threshold for differentially expressed genes was used as a gene with an adjusted p-value of less than 0.05. We did not attempt RT-qPCR validation of RNA-Seq results considering that RNA-Seq results are usually well correlated with RT-qPCR results and that our study extracts most of the biological functions through GSEA (not DEG analysis), which uses a large number of genes with small changes (Subramanian et al., 2005) that are difficult to validate by RT-qPCR.

Gene set enrichment analysis

Fold changes and adjusted p-values from differential gene expression (DEG) analysis were used to perform Gene Set Enrichment Analysis (GSEA; Subramanian et al., 2005). GSEA allows us to capture if the expressions of genes in a specific gene set are changed in a consistent direction, although each might not be significant enough to be counted as differentially expressed genes. The GSEA software (gsea2-2.2.4.jar; http://software.broadinstitute.org/gsea) was used to obtain enrichment scores. All expressed genes were ranked by the sign of fold change multiplied by –log10 (p-value). 1,000 permutations and a classic scoring scheme were used, as recommended by the program. Gene sets used in this study included those from the Molecular Signature Database (MSigDB v7.0; http://software.broadinstitute.org/gsea/msigdb) and ASD-related gene sets from previous studies (gene sets that are either upregulated or downregulated in ASD and ASD-risk gene sets; see the Results section below for details; Voineagu et al., 2011; Iossifov et al., 2014; Werling et al., 2016; Yang et al., 2018). GSEA results were visualized using EnrichmentMap App in Cytoscape 3.8.0. The RNA-Seq results are deposited in the NCBI GEO (National Center for Biotechnology Information, Gene Expression Omnibus) repository as GSE167053.

Statistics

Outlying data were excluded using ROUT test (Q = 1%). For male–female comparisons, two-way ANOVA (sex and genotype factors) with assumed normality was used. Graphpad Prism 9 and SigmaPlot 12.0 programs were used for statistical analyses. Statistical details are shown in Supplementary Table S1.

Results

Increased excitatory synaptic transmission in adult Chd8+/S62X males and females

To determine whether the similarly altered behaviors in adult Chd8+/S62X males and females (Lee et al., 2022) accompany synaptic dysfunctions, we measured synaptic transmissions in the adult hippocampus, a brain region associated with ASD (Schumann et al., 2004).

Adult (13–18 weeks) male and female Chd8+/S62X mice showed significant increases in miniature excitatory postsynaptic currents (mEPSCs) in CA1 hippocampal neurons compared with WT mice, as supported by genotype differences in mEPSC frequency and amplitude in two-way ANOVA analysis (Figure 1A; Supplementary Table S1). However, an additional Mann–Whitney U-test performed, based on the insignificant sex x genotype interaction in the two-way ANOVA, indicated a genotype difference in females but not in males in the frequency and no genotype difference in males or females in the amplitude. In contrast to these excitatory synaptic changes, there were no alterations in miniature inhibitory postsynaptic currents (mIPSCs) in Chd8+/S62X males or females compared with WT mice, although females showed greater mIPSC frequency and amplitude compared with males (Figure 1B).

FIGURE 1
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Figure 1. Increased excitatory synaptic transmission in adult Chd8+/S62X males and females. (A) mEPSCs in CA1 pyramidal neurons in adult Chd8+/S62X males and females (15–18 weeks). (n = 14 neurons from 3 mice [male-WT], 15/4 [male-HT], 16/4 [female-WT], and 15/3 [female-HT], *p < 0.05, **p < 0.01, two-way ANOVA, #p < 0.05, ns, not significant, Mann–Whitney U-test). (B) mIPSCs in CA1 pyramidal neurons in adult Chd8+/S62X males and females (13–16 weeks). (n = 22/4 [male-WT], 21/5 [male-HT], 16/3 [female-WT], and 26/4 [female-HT], ***p < 0.001, two-way ANOVA). (C) sEPSCs in CA1 pyramidal neurons in adult Chd8+/S62X males and females (13–16 weeks). (n = 14/3 [male-WT], 15/4 [male-HT], 16/4 [female-WT], and 15/3 [female-HT], two-way ANOVA). (D) sIPSCs in CA1 pyramidal neurons in adult Chd8+/S62X males and females (13–16 weeks). (n = 16/3 [male-WT], 15/3 [male-HT], 12/3 [female-WT], and 14/3 [female-HT], two-way ANOVA).

The excitatory synaptic differences, however, became insignificant when spontaneous excitatory postsynaptic currents (sEPSCs) were recorded by omitting the action-potential blocker tetrodotoxin in recording solutions to allow network activity (Figure 1C). Spontaneous inhibitory postsynaptic currents (sIPSCs) were also not different between genotypes (Figure 1D).

These results collectively suggest that the CHD8-S62X mutation enhances excitatory, but not inhibitory, synaptic transmission in adult male and female mutant mice, and that network activity compensates for the mutation-induced excitatory synaptic changes.

Opposite changes in excitatory synaptic transmission in juvenile Chd8+/S62X males and females

Given the stronger mother-seeking/attachment behavior in juvenile male Chd8+/S62X mice (Lee et al., 2022), we next tested whether juvenile (postnatal day [P] 22–28) Chd8+/S62X males and females show any differential changes in hippocampal mEPSCs or mIPSCs.

Intriguingly, juvenile male and female Chd8+/S62X mice showed opposite changes in mEPSCs, but not mIPSCs, compared with WT mice, with the frequency of mEPSCs decreasing in males but increasing in females; the amplitudes of mEPSCs were unaffected in either sex (Figures 2A,B). In addition, allowing network activity during recordings by omitting tetrodotoxin did not affect the oppositely changed mEPSC frequencies observed in juvenile male and female Chd8+/S62X mice (Figures 2C,D), in contrast to the abovementioned compensatory effects of network activity on mEPSCs in adult Chd8+/S62X mice. However, a moderate decrease in sIPSC amplitude (not frequency) was observed in male but not female Chd8+/S62X mice in the presence of network activity (Figure 2D).

FIGURE 2
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Figure 2. Opposite changes in excitatory synaptic transmission in juvenile Chd8+/S62X males and females. (A) mEPSCs in CA1 pyramidal neurons in juvenile Chd8+/S62X males and females (P25–28). (n = 21, 6 [male-WT], 24, 6 [male-HT], 21, 4 [female-WT], and 18, 4 [female-HT], *p < 0.05, **p < 0.01, ***p < 0.001, two-way ANOVA with Holm-Sidak test). (B) mIPSCs in CA1 pyramidal neurons in juvenile Chd8+/S62X males and females (P22–28). (n = 21, 4 [male-WT], 19, 4 [male-HT], 20, 4 [female-WT], and 18, 4 [female-HT], two-way ANOVA). (C) sEPSCs in CA1 pyramidal neurons in juvenile Chd8+/S62X males and females (P22–28). (n = 19, 4 [male-WT], 17, 4 [male-HT], 20, 4 [female-WT], and 16, 3 [female-HT], *p < 0.05, **p < 0.01, ***p < 0.001, two-way ANOVA with Holm-Sidak test). (D) sIPSCs in CA1 pyramidal neurons in juvenile Chd8+/S62X males and females (P22–28). (n = 35, 5 [male-WT], 31, 5 [male-HT], 16, 3 [female-WT], and 17, 3 [female-HT], *p < 0.05, **p < 0.01, ns, not significant, two-way ANOVA with Holm-Sidak test).

Therefore, the CHD8-S62X mutation results in the opposite, or sexually dimorphic, changes in excitatory, but not inhibitory, synaptic transmissions that are resistant to network correction in the juvenile mice, which contrasts with the sensitivity of the excitatory synaptic change to network correction in adult mutant mice.

Age-differential ASD-like transcriptomic changes in male and female Chd8+/S62X mice

The results recently reported (Lee et al., 2022) and mentioned above indicate largely similar synaptic and behavioral phenotypes in adult male and female mutant mice but sexually dimorphic synaptic changes and male-preponderant behavioral deficits in juvenile mutant males and females. To better understand the mechanisms underlying these results, we performed a longitudinal analysis of transcriptomic changes in the whole brain of P0 (newborn), P25 (juvenile), and P80 (adult) Chd8+/S62X males and females (see Supplementary Table S2 for raw RNA-Seq data).

Analyses of the RNA-Seq results with a focus on differentially expressed genes (DEGs) did not reveal detectable changes in biological functions, likely because of the small numbers of DEGs in P0, P25, and P80 Chd8+/S62X males and females (Figures 3AF; see Supplementary Table S3 for the complete list of DEGs). We thus performed a gene set enrichment analysis (GSEA), a method optimized to identify biological functions that depend on a large number of genes with small, but coordinated, changes rather than by a small number of genes with large changes above artificial cutoffs.1

FIGURE 3
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Figure 3. DEG analyses of RNA-Seq results from P0, P25, and P80 male and female HT/WT transcripts. (A–F) Volcano plots, tables, and Venn diagrams summarizing the DEGs from P0, P25, and P80 male and female HT/WT transcripts. Orange, genes with adjusted p-value < 0.05; red, genes with adjusted p-value < 0.05 + |FC| > 1.5 (see Supplementary Table S3 for further details on DEGs). Note that the number of overlapping DEGs between males and females is small.

GSEA results revealed that, at P0, both male and female Chd8+/S62X mice showed transcriptomic changes similar to those that occur in ASD (hereafter termed ‘ASD-like pattern’). Specifically, P0 male HT/WT transcripts—the complete set of transcripts differentially expressed between heterozygous Chd8+/S62X mice and WT mice (ranked by fold-change signs x –log10 [p-value])—were positively enriched for ASD-related gene sets (summarized in Supplementary Tables S4, S5) that are upregulated in ASD (DEG_Up_Voineagu and Co_Exp_Up_Voineagu; Voineagu et al., 2011; Werling et al., 2016), although not negatively enriched for ASD-downregulated gene sets (DEG_Down_Voineagu and Co_Exp_Down_Voineagu; Figure 4A).

FIGURE 4
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Figure 4. Age-differential ASD-like transcriptomic changes in adult Chd8+/S62X males and females. (A) GSEA of P0, P25, and P80 male and female HT/WT transcripts for ASD-related/risk gene sets, including those upregulated in ASD (DEG_Up_Voineagu and Co-Exp_Up_M16_Voineagu) and downregulated in ASD (DEG_Down_Voineagu and Co-Exp_Down_M12_Voineagu) as well as ASD-risk gene sets that are likely downregulated in ASD (SFARI [all], SFARI [high confidence], FMRP targets, DeNovoMis, DeNovoVariants, and AutismKB). (see Supplementary Tables S5S7 for full results). (n = 3 mice for P0/25/80, male/female, and WT/HT mice, FDR < 0.05). (B) GSEA of P0, P25, and P80 male and female HT/WT transcripts for cell-type–specific gene sets related to neurons (cortical layers and GABA sub-types). (n = 3 mice for P0/25/80, male/female, and WT/HT mice, FDR < 0.05). (C) GSEA of P0, P25, and P80 male and female HT/WT transcripts for cell-type–specific gene sets related to glial cells (oligodendrocytes, astrocytes, and microglia; n = 3 mice for P0/25/80, male/female, and WT/HT mice, FDR < 0.05).

In addition, P0 male HT/WT transcripts showed negative enrichments for ASD-risk gene sets such as SFARI genes2 and FMRP targets (Werling et al., 2016) but not for DeNovoMis (protein-disrupting or missense rare de novo variants; Iossifov et al., 2014; Werling et al., 2016), DeNovoVariants (protein-disrupting rare de novo variants; Iossifov et al., 2014; Werling et al., 2016), or AutismKB (Autism KnowledgeBase; Yang et al., 2018; Figure 4A); these gene sets are thought to be downregulated by ASD-related deletion, non-sense, missense, frame-shift, and/or splice-site mutations. P0 female HT/WT transcripts showed positive and negative enrichments in ASD-related and ASD-risk gene sets. This is similar to the changes observed in P0-male HT/WT transcripts, which indicates comparable transcriptomic changes in P0 mutant males and females.

In contrast, P25 male and female HT/WT transcripts showed distinct enrichment patterns. P25 males showed an “ASD-like” pattern similar to that observed in ASD as well as P0 males and females, whereas P25 females showed a pattern that is largely unrelated to ASD, with minimal enrichments for ASD-related/risk gene sets (Figure 4A; Supplementary Table S6).

Intriguingly, at P80, male HT/WT transcripts showed minimal enrichment for ASD-related/risk gene sets, whereas female HT/WT transcripts displayed a strong ASD-like pattern (Figure 4A; Supplementary Table S7). These results indicate that mutant male transcriptomes show strong ASD-like, monophasic patterns at ~P0 and P25 but not at P80, whereas mutant female transcriptomes show strong ASD-like patterns at ~P0 and P80 (a biphasic pattern), with a weak or no ASD-like pattern at ~P25.

Previous studies have also reported that ASD is associated with cell-type–specific transcriptomic changes, including decreased gene expression in neurons and oligodendrocytes and increased gene expression in astrocytes and microglia (Voineagu et al., 2011; Werling et al., 2016), although alternative splicing of these genes controlled by proteins, including RBFOX1, can provide a distinct layer of regulation (Irimia et al., 2014; Parikshak et al., 2016; Quesnel-Vallieres et al., 2019). Tests of Chd8+/S62X transcriptomes for the enrichment of cell-type-specific gene sets (Albright and Gonzalez-Scarano, 2004; Cahoy et al., 2008; Kang et al., 2011; Zeisel et al., 2015; Werling et al., 2016; Velmeshev et al., 2019, 2020) showed that both male and female P0 HT/WT transcriptomes were negatively enriched for excitatory neuron-related gene sets but positively enriched for astrocyte-and microglia-related gene sets (Figures 4B,C), consistent with “ASD-like” patterns. However, mixed positive and negative enrichments could also be observed for some gene sets associated with inhibitory neurons and oligodendrocytes, standing in between the ASD-like pattern and an opposite change (hereafter termed “reverse-ASD-like” pattern).

P25 male HT/WT transcripts maintained this tendency toward an ASD-like pattern, with the negative enrichment for inhibitory neurons getting stronger, but P25 female HT/WT transcripts showed a pattern opposite that of the ASD-like pattern (i.e., nearly undetectable neuronal enrichments, upregulated oligodendrocyte genes, and downregulated astrocyte and microglial genes; Figures 4B,C). At P80, male HT/WT transcripts showed enrichment patterns that were partly ASD-like (moderately downregulated neuronal genes and downregulated oligodendrocyte genes) and reverse-ASD (downregulated astrocyte and microglia genes), whereas female HT/WT transcripts showed a strong ASD-like pattern (downregulated neuronal and oligodendrocyte genes and upregulated astrocyte and microglia genes).

These results collectively suggest that male HT/WT transcripts show monophasic ASD-like transcriptomic changes that peak at ~P0 and P25, whereas female HT/WT transcripts show biphasic transcriptomic changes peaking at ~P0 and P80.

Age-differential functional changes in male and female Chd8+/S62X transcriptomes

We next tested whether Chd8+/S62X transcriptomes are enriched for specific biological functions by applying GSEA to gene sets in the Gene Ontology (C5) gene-set database (currently containing ~15,700 gene sets; http://www.gsea-msigdb.org/gsea/msigdb).

In the cellular component (CC) domain, P0 male HT/WT transcripts were positively enriched for extracellular matrix-and chromatin-related gene sets, as shown by the top-five gene-set list (Figure 5A; see Supplementary Tables S5S7 for full GSEA results [GSEA-CC]) and the clusters of enriched gene sets revealed by the EnrichmentMap Cytoscape App (Isserlin et al., 2014; Figure 5B). P0 male HT/WT transcripts were also negatively enriched for synapse-, spliceosome-, ribosome-, mitochondria-, and chromatin remodeling-related gene sets, as shown by top-five and clustered gene sets (Figures 5A,B). P0-female-HT/WT transcripts showed similar positive and negative enrichment patterns.

FIGURE 5
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Figure 5. Biological functions differentially altered in male and female Chd8+/S62X transcriptomes. (A) GSEA of P0, P25, and P80 male and female HT/WT transcripts for gene sets in the cellular components (CC) domain of the C5 database (http://software.broadinstitute.org/gsea). Top-five gene sets positively (red circles) or negatively (blue circles) enriched in male or female transcripts are listed, together with the same gene sets in the other sex and their enrichment levels (see Supplementary Tables S5S7 for full results). (n = 3 mice for P0/P25/P80 male/female mice, FDR (false discovery rate) < 0.05; NES, normalized enrichment score). (B) Integration and visualization of enriched genes in larger clusters using Cytoscape EnrichmentMap. (n = 3 mice for P0/25/80 male/female mice; node cutoff, FDR < 0.05 and p < 0.001; edge cutoff, overlap coefficient > 0.5).

At P25, male HT/WT transcripts were negatively enriched for synapse-, ribosome-, and mitochondria-related gene sets (Figures 5A,B), a pattern with some similarity to that observed in P0 males. In P25 females, however, HT/WT transcripts were positively enriched for ribosome-and mitochondria-related gene sets (Figures 5A,B), a pattern largely opposite that observed in P25 males.

At P80, male HT/WT transcripts showed minimal enrichment patterns (positive or negative), whereas female HT/WT transcripts showed strong negative enrichments for synapse-related gene sets and positive enrichments for ribosome/mitochondria-related gene sets (Figures 5A,B).

Tests of gene sets in biological process and molecular function domains (C5 database) revealed enrichment patterns that are largely similar to those observed for CC-domain gene sets, although MF-domain gene sets tended to show weaker enrichments (Figure 6A,B; Supplementary Figure S1; Supplementary Tables S5S7).

FIGURE 6
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Figure 6. Transcriptomic changes in Chd8+/S62X males and females for gene sets in the biological process domain. (A) GSEA of P0, P25, and P80 male and female HT/WT transcripts for gene sets in the biological process (BP) domain of the C5 database (http://software.broadinstitute.org/gsea). Top-five gene sets positively or negatively enriched in male or female transcripts are listed, together with the same gene sets in the other sex and their enrichment levels (see Supplementary Tables S5S7 for complete results). (n = 3 mice for P0/P25/P80 male/female mice, FDR (false discovery rate) < 0.05; NES, normalized enrichment score). (B) Integration and visualization of enriched genes in larger clusters using Cytoscape EnrichmentMap. (n = 3 mice for P0/25/80 male/female mice; node cutoff, FDR < 0.05 and p < 0.001; edge cutoff, overlap coefficient > 0.5).

These results collectively suggest that synapse genes are downregulated at P0 and P25 in mutant males and at P0 and P80 in mutant females. Notably, downregulations of synapse genes in P25 males and P80 females were strongly correlated with the ASD-like transcriptomic patterns (Voineagu et al., 2011; Werling et al., 2016) observed in these animals.

Discussion

We characterized synaptic and transcriptomic phenotypes of Chd8+/S62X males and females at multiple postnatal stages and found age-differential sexual dimorphism at both synaptic and transcriptomic levels.

Our previous study Chd8+/S62X mice revealed that behavioral deficits are observed in male but not female juveniles, whereas adult mutant males and females display similar behavioral deficits (Lee et al., 2022). This age-differential sexual dimorphism in the behaviors of Chd8+/S62X mice differs from the persistent male-preponderant behavioral deficits in Chd8+/N2373X pups, juveniles, and adults (Jung et al., 2018). What might be the mechanisms underlying the age-differential behavioral deficits in Chd8+/S62X males and females?

Our results indicated decreased excitatory synaptic transmission in male Chd8+/S62X juveniles. This change was correlated with both ASD-like transcriptomic changes and autistic-like behaviors (enhanced mother seeking/attachment), suggesting that the decreased excitatory transmission contributes to the behavioral deficits. In contrast, female juvenile mutant mice showed increased excitatory synaptic transmission that correlated with considerably weakened ASD-like transcriptomic patterns (relative to newborn-stage patterns) and largely normal behaviors. Therefore, excitatory synaptic suppression likely underlies the male-preponderant behavioral deficits in juvenile mutant mice. This hypothesis is in line with the synaptic dysfunction frequently implicated in ASD (Bourgeron, 2015), active synaptic development at juvenile stages (i.e., 2–3 postnatal weeks; Sheng and Sala, 2001), and neuronal/synaptic excitation/inhibition imbalances implicated in ASD (Nelson and Valakh, 2015; Lee et al., 2017). Notably, overproduction of inhibitory neurons, which would also induce a decrease in the excitation/inhibition ratio, similar to our results (glutamate synaptic suppression), was observed in human ASD-related cortical organoids (Mariani et al., 2015), suggesting that distinct mechanisms in mice and humans may underlie a similar excitation/inhibition imbalance.

At adult stages, Chd8+/S62X males and females show strong and shared autistic-like behavioral deficits (self-grooming and anxiety-like behaviors; Lee et al., 2022). These mice also exhibit shared increases in excitatory synaptic transmission (mEPSC results). These strong correlations suggest that the increased excitatory synaptic transmission may underlie autistic-like behaviors in mutant males and females at adult stages. While displaying similar increases in excitatory synaptic transmission as adults, Chd8+/S62X males and females seem to undergo distinct synaptic and transcriptomic changes across the juvenile-to-adult temporal axis. Specifically, Chd8+/S62X males show decreased excitatory synaptic transmission as juveniles but increased excitatory transmission as adults. This age-dependent reversal could reflect the consequence of excessive compensatory changes to normalize the decreased juvenile excitatory synaptic transmission. Such compensatory changes and synaptic normalization may induce the substantial weakening of ASD-like transcriptomic patterns that occurs between juvenile and adult stages, although these compensations appear to be not sufficient to rescue the behavioral deficits.

Adult female Chd8+/S62X mice, unlike adult males, show excitatory synaptic transmission that continues to be increased across juvenile and adult stages. However, the weakened ASD-like transcriptomic patterns in juvenile female mutant mice, relative to newborn mice, become strong again in adult female mutant mice in a biphasic manner, similar to the ASD-like transcriptomic patterns in newborn mice. It is possible that the increased excitatory synaptic transmission, which likely rescues the behavioral deficits in juvenile mutant females, may no longer be able to protect adult females from developing behavioral deficits. Notably, in adult mutant females, the increased excitatory synaptic transmission in adult mutant females is sensitive to network compensation, as supported by the adult sEPSC results, unlike the increased excitatory synaptic transmission in juvenile mutant females that is resistant to network compensation (juvenile sEPSC results). This may represent acute adult-onset compensatory changes aiming to normalize excitatory synaptic transmission, which may be mediated by the strongly suppressed synaptic gene expressions, although this might induce secondary synapse-related changes that aggravate brain functions and behaviors.

The data collected from Chd8+/S62X mice in the present and previous studies are limited by the lack of causal relationships between the observed molecular, synaptic, and behavioral changes. Although additional details remain to be determined, our data may provide some baseline information given that little is known about (1) whether the strong male preponderance in autistic individuals with CHD8 mutations could be recapitulated in mice, (2) whether different CHD8 mutations lead to heterogeneous male–female differences in mice in a spatiotemporally differential manner, and (3) what mechanisms underlie the CHD8-related sexual dimorphism and the general sexual dimorphism widespread in ASD and neurodevelopmental and psychiatric disorders.

In summary, our results provide evidence suggesting that the CHD8-S62X mutation derived from an autistic individual leads to age-differential and sexually dimorphic synaptic and transcriptomic changes in mice.

Data availability statement

The RNA-Seq results are deposited in the NCBI GEO (National Center for Biotechnology Information, Gene Expression Omnibus) repository as GSE167053.

Ethics statement

The animal study was reviewed and approved by Committee on Animal Research at KAIST.

Author contributions

SL and HKw performed electrophysiological experiments. SL and HKa performed RNA-Seq analyses. HKa and EK wrote the manuscript. All authors contributed to the article and approved the submitted version.

Funding

This work was supported by the IBS-R002-D1 to EK.

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

Supplementary material

The Supplementary material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fnmol.2023.1111388/full#supplementary-material

Footnotes

References

Albright, A. V., and Gonzalez-Scarano, F. (2004). Microarray analysis of activated mixed glial (microglia) and monocyte-derived macrophage gene expression. J. Neuroimmunol. 157, 27–38. doi: 10.1016/j.jneuroim.2004.09.007

PubMed Abstract | CrossRef Full Text | Google Scholar

Andreae, L. C., and Basson, M. A. (2018). Sex bias in autism: new insights from Chd8 mutant mice? Nat. Neurosci. 21, 1144–1146. doi: 10.1038/s41593-018-0217-y

PubMed Abstract | CrossRef Full Text | Google Scholar

Barnard, R. A., Pomaville, M. B., and O'Roak, B. J. (2015). Mutations and modeling of the chromatin remodeler CHD8 define an emerging autism etiology. Front. Neurosci. 9:477. doi: 10.3389/fnins.2015.00477

PubMed Abstract | CrossRef Full Text | Google Scholar

Bernier, R., Golzio, C., Xiong, B., Stessman, H. A., Coe, B. P., Penn, O., et al. (2014). Disruptive CHD8 mutations define a subtype of autism early in development. Cells 158, 263–276. doi: 10.1016/j.cell.2014.06.017

PubMed Abstract | CrossRef Full Text | Google Scholar

Bourgeron, T. (2015). From the genetic architecture to synaptic plasticity in autism spectrum disorder. Nat. Rev. Neurosci. 16, 551–563. doi: 10.1038/nrn3992

PubMed Abstract | CrossRef Full Text | Google Scholar

Breuss, M. W., and Gleeson, J. G. (2016). When size matters: CHD8 in autism. Nat. Neurosci. 19, 1430–1432. doi: 10.1038/nn.4431

PubMed Abstract | CrossRef Full Text | Google Scholar

Cahoy, J. D., Emery, B., Kaushal, A., Foo, L. C., Zamanian, J. L., Christopherson, K. S., et al. (2008). A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function. J. Neurosci. 28, 264–278. doi: 10.1523/JNEUROSCI.4178-07.2008

PubMed Abstract | CrossRef Full Text | Google Scholar

Chen, X., Chen, T., Dong, C., Chen, H., Dong, X., Yang, L., et al. (2022). Deletion of CHD8 in cerebellar granule neuron progenitors leads to severe cerebellar hypoplasia, ataxia, and psychiatric behavior in mice. J. Genet. Genomics 49, 859–869. doi: 10.1016/j.jgg.2022.02.011

PubMed Abstract | CrossRef Full Text | Google Scholar

Cherepanov, S. M., Gerasimenko, M., Yuhi, T., Furuhara, K., Tsuji, C., Yokoyama, S., et al. (2021). Oxytocin ameliorates impaired social behavior in a Chd8 haploinsufficiency mouse model of autism. BMC Neurosci. 22:32. doi: 10.1186/s12868-021-00631-6

PubMed Abstract | CrossRef Full Text | Google Scholar

Coakley-Youngs, E., Ranatunga, M., Richardson, S., Getti, G., Shorter, S., and Fivaz, M. (2022). Autism-associated CHD8 keeps proliferation of human neural progenitors in check by lengthening the G1 phase of the cell cycle. Biol. Open 11:bio058941. doi: 10.1242/bio.058941

PubMed Abstract | CrossRef Full Text | Google Scholar

Cotney, J., Muhle, R. A., Sanders, S. J., Liu, L., Willsey, A. J., Niu, W., et al. (2015). The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment. Nat. Commun. 6:6404. doi: 10.1038/ncomms7404

PubMed Abstract | CrossRef Full Text | Google Scholar

Ding, S., Lan, X., Meng, Y., Yan, C., Li, M., Li, X., et al. (2021). CHD8 safeguards early neuroectoderm differentiation in human ESCs and protects from apoptosis during neurogenesis. Cell Death Dis. 12:981. doi: 10.1038/s41419-021-04292-5

PubMed Abstract | CrossRef Full Text | Google Scholar

Dingemans, A. J. M., Truijen, K. M. G., van de Ven, S., Bernier, R., Bongers, E., Bouman, A., et al. (2022). The phenotypic spectrum and genotype-phenotype correlations in 106 patients with variants in major autism gene CHD8. Transl. Psychiatry 12:421. doi: 10.1038/s41398-022-02189-1

PubMed Abstract | CrossRef Full Text | Google Scholar

Dong, C., Zhao, C., Chen, X., Berry, K., Wang, J., Zhang, F., et al. (2022). Conserved and distinct functions of the autism-related chromatin remodeler CHD8 in embryonic and adult forebrain neurogenesis. J. Neurosci. 42, 8373–8392. doi: 10.1523/JNEUROSCI.2400-21.2022

PubMed Abstract | CrossRef Full Text | Google Scholar

Durak, O., Gao, F., Kaeser-Woo, Y. J., Rueda, R., Martorell, A. J., Nott, A., et al. (2016). Chd8 mediates cortical neurogenesis via transcriptional regulation of cell cycle and Wnt signaling. Nat. Neurosci. 19, 1477–1488. doi: 10.1038/nn.4400

PubMed Abstract | CrossRef Full Text | Google Scholar

Ellingford, R. A., Panasiuk, M. J., de Meritens, E. R., Shaunak, R., Naybour, L., Browne, L., et al. (2021). Cell-type-specific synaptic imbalance and disrupted homeostatic plasticity in cortical circuits of ASD-associated Chd8 haploinsufficient mice. Mol. Psychiatry 26, 3614–3624. doi: 10.1038/s41380-021-01070-9

PubMed Abstract | CrossRef Full Text | Google Scholar

Gompers, A. L., Su-Feher, L., Ellegood, J., Copping, N. A., Riyadh, M. A., Stradleigh, T. W., et al. (2017). Germline Chd8 haploinsufficiency alters brain development in mouse. Nat. Neurosci. 20, 1062–1073. doi: 10.1038/nn.4592

PubMed Abstract | CrossRef Full Text | Google Scholar

Haddad Derafshi, B., Danko, T., Chanda, S., Batista, P. J., Litzenburger, U., Lee, Q. Y., et al. (2022). The autism risk factor CHD8 is a chromatin activator in human neurons and functionally dependent on the ERK-MAPK pathway effector ELK1. Sci. Rep. 12:22425. doi: 10.1038/s41598-022-23614-x

PubMed Abstract | CrossRef Full Text | Google Scholar

Hayot, G., Massonot, M., Keime, C., Faure, E., and Golzio, C. (2023). Loss of autism-candidate CHD8 perturbs neural crest development and intestinal homeostatic balance. Life Sci. Alliance 6:e202201456. doi: 10.26508/lsa.202201456

CrossRef Full Text | Google Scholar

Hulbert, S. W., Wang, X., Gbadegesin, S. O., Xu, Q., Xu, X., and Jiang, Y. H. (2020). A novel Chd8 mutant mouse displays altered ultrasonic vocalizations and enhanced motor coordination. Autism Res. 13, 1685–1697. doi: 10.1002/aur.2353

PubMed Abstract | CrossRef Full Text | Google Scholar

Hurley, S., Mohan, C., Suetterlin, P., Ellingford, R., Riegman, K. L. H., Ellegood, J., et al. (2021). Distinct, dosage-sensitive requirements for the autism-associated factor CHD8 during cortical development. Mol. Autism. 12:16. doi: 10.1186/s13229-020-00409-3

PubMed Abstract | CrossRef Full Text | Google Scholar

Iossifov, I., O'Roak, B. J., Sanders, S. J., Ronemus, M., Krumm, N., Levy, D., et al. (2014). The contribution of de novo coding mutations to autism spectrum disorder. Nature 515, 216–221. doi: 10.1038/nature13908

PubMed Abstract | CrossRef Full Text | Google Scholar

Irimia, M., Weatheritt, R. J., Ellis, J. D., Parikshak, N. N., Gonatopoulos-Pournatzis, T., Babor, M., et al. (2014). A highly conserved program of neuronal microexons is misregulated in autistic brains. Cells 159, 1511–1523. doi: 10.1016/j.cell.2014.11.035

PubMed Abstract | CrossRef Full Text | Google Scholar

Isserlin, R., Merico, D., Voisin, V., and Bader, G. D. (2014). Enrichment map—a Cytoscape app to visualize and explore OMICs pathway enrichment results. F1000Res 3:141. doi: 10.12688/f1000research.4536.1

CrossRef Full Text | Google Scholar

Jimenez, J. A., Ptacek, T. S., Tuttle, A. H., Schmid, R. S., Moy, S. S., Simon, J. M., et al. (2020). Chd8 haploinsufficiency impairs early brain development and protein homeostasis later in life. Mol. Autism. 11:74. doi: 10.1186/s13229-020-00369-8

PubMed Abstract | CrossRef Full Text | Google Scholar

Jimenez, J. A., Simon, J. M., Hu, W., Moy, S. S., Harper, K. M., Liu, C. W., et al. (2022). Developmental pyrethroid exposure and age influence phenotypes in a Chd8 haploinsufficient autism mouse model. Sci. Rep. 12:5555. doi: 10.1038/s41598-022-09533-x

PubMed Abstract | CrossRef Full Text | Google Scholar

Jung, H., Park, H., Choi, Y., Kang, H., Lee, E., Kweon, H., et al. (2018). Sexually dimorphic behavior, neuronal activity, and gene expression in Chd8-mutant mice. Nat. Neurosci. 21, 1218–1228. doi: 10.1038/s41593-018-0208-z

PubMed Abstract | CrossRef Full Text | Google Scholar

Kang, H. J., Kawasawa, Y. I., Cheng, F., Zhu, Y., Xu, X., Li, M., et al. (2011). Spatio-temporal transcriptome of the human brain. Nature 478, 483–489. nature10523 [pii]. doi: 10.1038/nature10523

PubMed Abstract | CrossRef Full Text | Google Scholar

Katayama, Y., Nishiyama, M., Shoji, H., Ohkawa, Y., Kawamura, A., Sato, T., et al. (2016). CHD8 haploinsufficiency results in autistic-like phenotypes in mice. Nature 537, 675–679. doi: 10.1038/nature19357

PubMed Abstract | CrossRef Full Text | Google Scholar

Kawamura, A., Katayama, Y., Kakegawa, W., Ino, D., Nishiyama, M., Yuzaki, M., et al. (2021). The autism-associated protein CHD8 is required for cerebellar development and motor function. Cell Rep. 35:108932. doi: 10.1016/j.celrep.2021.108932

PubMed Abstract | CrossRef Full Text | Google Scholar

Kerschbamer, E., Arnoldi, M., Tripathi, T., Pellegrini, M., Maturi, S., Erdin, S., et al. (2022). CHD8 suppression impacts on histone H3 lysine 36 trimethylation and alters RNA alternative splicing. Nucleic Acids Res. 50, 12809–12828. doi: 10.1093/nar/gkac1134

PubMed Abstract | CrossRef Full Text | Google Scholar

Kweon, H., Jung, W. B., Im, G. H., Ryoo, J., Lee, J. H., Do, H., et al. (2021). Excitatory neuronal CHD8 in the regulation of neocortical development and sensory-motor behaviors. Cell Rep. 34:108780. doi: 10.1016/j.celrep.2021.108780

PubMed Abstract | CrossRef Full Text | Google Scholar

Lee, S. Y., Kweon, H., Kang, H., and Kim, E. (2022). Age-differential sexual dimorphism in CHD8-S62X-mutant mouse behaviors. Front. Mol. Neurosci. 15:1022306. doi: 10.3389/fnmol.2022.1022306

PubMed Abstract | CrossRef Full Text | Google Scholar

Lee, E., Lee, J., and Kim, E. (2017). Excitation/inhibition imbalance in animal models of autism Spectrum disorders. Biol. Psychiatry 81, 838–847. doi: 10.1016/j.biopsych.2016.05.011

PubMed Abstract | CrossRef Full Text | Google Scholar

Love, M. I., Huber, W., and Anders, S. (2014). Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 15:550. doi: 10.1186/s13059-014-0550-8

PubMed Abstract | CrossRef Full Text | Google Scholar

Mariani, J., Coppola, G., Zhang, P., Abyzov, A., Provini, L., Tomasini, L., et al. (2015). FOXG1-dependent dysregulation of GABA/glutamate neuron differentiation in autism Spectrum disorders. Cells 162, 375–390. doi: 10.1016/j.cell.2015.06.034

PubMed Abstract | CrossRef Full Text | Google Scholar

Merner, N., Forgeot d'Arc, B., Bell, S. C., Maussion, G., Peng, H., Gauthier, J., et al. (2016). A de novo frameshift mutation in chromodomain helicase DNA-binding domain 8 (CHD8): a case report and literature review. Am. J. Med. Genet. A 170, 1225–1235. doi: 10.1002/ajmg.a.37566

CrossRef Full Text | Google Scholar

Nelson, S. B., and Valakh, V. (2015). Excitatory/inhibitory balance and circuit homeostasis in autism Spectrum disorders. Neuron 87, 684–698. doi: 10.1016/j.neuron.2015.07.033

PubMed Abstract | CrossRef Full Text | Google Scholar

O'Roak, B. J., Vives, L., Fu, W., Egertson, J. D., Stanaway, I. B., Phelps, I. G., et al. (2012). Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders. Science 338, 1619–1622. doi: 10.1126/science.1227764

PubMed Abstract | CrossRef Full Text | Google Scholar

Parikshak, N. N., Swarup, V., Belgard, T. G., Irimia, M., Ramaswami, G., Gandal, M. J., et al. (2016). Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism. Nature 540, 423–427. doi: 10.1038/nature20612

PubMed Abstract | CrossRef Full Text | Google Scholar

Patro, R., Duggal, G., Love, M. I., Irizarry, R. A., and Kingsford, C. (2017). Salmon provides fast and bias-aware quantification of transcript expression. Nat. Methods 14, 417–419. doi: 10.1038/nmeth.4197

PubMed Abstract | CrossRef Full Text | Google Scholar

Paulsen, B., Velasco, S., Kedaigle, A. J., Pigoni, M., Quadrato, G., Deo, A. J., et al. (2022). Autism genes converge on asynchronous development of shared neuron classes. Nature 602, 268–273. doi: 10.1038/s41586-021-04358-6

PubMed Abstract | CrossRef Full Text | Google Scholar

Platt, R. J., Zhou, Y., Slaymaker, I. M., Shetty, A. S., Weisbach, N. R., Kim, J. A., et al. (2017). Chd8 mutation leads to autistic-like behaviors and impaired striatal circuits. Cell Rep. 19, 335–350. doi: 10.1016/j.celrep.2017.03.052

PubMed Abstract | CrossRef Full Text | Google Scholar

Quesnel-Vallieres, M., Weatheritt, R. J., Cordes, S. P., and Blencowe, B. J. (2019). Autism spectrum disorder: insights into convergent mechanisms from transcriptomics. Nat. Rev. Genet. 20, 51–63. doi: 10.1038/s41576-018-0066-2

PubMed Abstract | CrossRef Full Text | Google Scholar

Schumann, C. M., Hamstra, J., Goodlin-Jones, B. L., Lotspeich, L. J., Kwon, H., Buonocore, M. H., et al. (2004). The amygdala is enlarged in children but not adolescents with autism; the hippocampus is enlarged at all ages. J. Neurosci. 24, 6392–6401. doi: 10.1523/JNEUROSCI.1297-04.2004

PubMed Abstract | CrossRef Full Text | Google Scholar

Sheng, M., and Sala, C. (2001). PDZ domains and the organization of supramolecular complexes. Annu. Rev. Neurosci. 24, 1–29. doi: 10.1146/annurev.neuro.24.1.1

PubMed Abstract | CrossRef Full Text | Google Scholar

Soneson, C., Love, M. I., and Robinson, M. D. (2015). Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences. F1000Res 4:1521. doi: 10.12688/f1000research.7563.2

CrossRef Full Text | Google Scholar

Sood, S., Weber, C. M., Hodges, H. C., Krokhotin, A., Shalizi, A., and Crabtree, G. R. (2020). CHD8 dosage regulates transcription in pluripotency and early murine neural differentiation. Proc. Natl. Acad. Sci. U. S. A. 117, 22331–22340. doi: 10.1073/pnas.1921963117

PubMed Abstract | CrossRef Full Text | Google Scholar

Stessman, H. A., Xiong, B., Coe, B. P., Wang, T., Hoekzema, K., Fenckova, M., et al. (2017). Targeted sequencing identifies 91 neurodevelopmental-disorder risk genes with autism and developmental-disability biases. Nat. Genet. 49, 515–526. doi: 10.1038/ng.3792

PubMed Abstract | CrossRef Full Text | Google Scholar

Subramanian, A., Tamayo, P., Mootha, V. K., Mukherjee, S., Ebert, B. L., Gillette, M. A., et al. (2005). Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl. Acad. Sci. U. S. A. 102, 15545–15550. doi: 10.1073/pnas.0506580102

PubMed Abstract | CrossRef Full Text | Google Scholar

Suetterlin, P., Hurley, S., Mohan, C., Riegman, K. L. H., Pagani, M., Caruso, A., et al. (2018). Altered neocortical gene expression, brain overgrowth and functional over-connectivity in Chd8 Haploinsufficient mice. Cereb. Cortex 28, 2192–2206. doi: 10.1093/cercor/bhy058

PubMed Abstract | CrossRef Full Text | Google Scholar

Sugathan, A., Biagioli, M., Golzio, C., Erdin, S., Blumenthal, I., Manavalan, P., et al. (2014). CHD8 regulates neurodevelopmental pathways associated with autism spectrum disorder in neural progenitors. Proc. Natl. Acad. Sci. U. S. A. 111, E4468–E4477. doi: 10.1073/pnas.1405266111

PubMed Abstract | CrossRef Full Text | Google Scholar

Thudium, S., Palozola, K., L'Her, E., and Korb, E. (2022). Identification of a transcriptional signature found in multiple models of ASD and related disorders. Genome Res. 32, 1642–1654. doi: 10.1101/gr.276591.122

PubMed Abstract | CrossRef Full Text | Google Scholar

Tu, Z., Fan, C., Davis, A. K., Hu, M., Wang, C., Dandamudi, A., et al. (2022). Autism-associated chromatin remodeler CHD8 regulates erythroblast cytokinesis and fine-tunes the balance of rho GTPase signaling. Cell Rep. 40:111072. doi: 10.1016/j.celrep.2022.111072

PubMed Abstract | CrossRef Full Text | Google Scholar

Velmeshev, D., Magistri, M., Mazza, E. M. C., Lally, P., Khoury, N., D'Elia, E. R., et al. (2020). Cell-type-specific analysis of molecular pathology in autism identifies common genes and pathways affected across neocortical regions. Mol. Neurobiol. 57, 2279–2289. doi: 10.1007/s12035-020-01879-5

PubMed Abstract | CrossRef Full Text | Google Scholar

Velmeshev, D., Schirmer, L., Jung, D., Haeussler, M., Perez, Y., Mayer, S., et al. (2019). Single-cell genomics identifies cell type-specific molecular changes in autism. Science 364, 685–689. doi: 10.1126/science.aav8130

PubMed Abstract | CrossRef Full Text | Google Scholar

Villa, C. E., Cheroni, C., Dotter, C. P., Lopez-Tobon, A., Oliveira, B., Sacco, R., et al. (2022). CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories. Cell Rep. 39:110615. doi: 10.1016/j.celrep.2022.110615

PubMed Abstract | CrossRef Full Text | Google Scholar

Voineagu, I., Wang, X., Johnston, P., Lowe, J. K., Tian, Y., Horvath, S., et al. (2011). Transcriptomic analysis of autistic brain reveals convergent molecular pathology. Nature 474, 380–384. doi: 10.1038/nature10110

PubMed Abstract | CrossRef Full Text | Google Scholar

Wade, A. A., Lim, K., Catta-Preta, R., and Nord, A. S. (2018). Common CHD8 genomic targets contrast with model-specific transcriptional impacts of CHD8 Haploinsufficiency. Front. Mol. Neurosci. 11:481. doi: 10.3389/fnmol.2018.00481

PubMed Abstract | CrossRef Full Text | Google Scholar

Wang, P., Lin, M., Pedrosa, E., Hrabovsky, A., Zhang, Z., Guo, W., et al. (2015). CRISPR/Cas9-mediated heterozygous knockout of the autism gene CHD8 and characterization of its transcriptional networks in neurodevelopment. Mol. Autism. 6:55. doi: 10.1186/s13229-015-0048-6

PubMed Abstract | CrossRef Full Text | Google Scholar

Wang, P., Mokhtari, R., Pedrosa, E., Kirschenbaum, M., Bayrak, C., Zheng, D., et al. (2017). CRISPR/Cas9-mediated heterozygous knockout of the autism gene CHD8 and characterization of its transcriptional networks in cerebral organoids derived from iPS cells. Mol. Autism. 8:11. doi: 10.1186/s13229-017-0124-1

PubMed Abstract | CrossRef Full Text | Google Scholar

Weissberg, O., and Elliott, E. (2021). The mechanisms of CHD8 in neurodevelopment and autism Spectrum disorders. Genes 12:1133. doi: 10.3390/genes12081133

PubMed Abstract | CrossRef Full Text | Google Scholar

Werling, D. M., Parikshak, N. N., and Geschwind, D. H. (2016). Gene expression in human brain implicates sexually dimorphic pathways in autism spectrum disorders. Nat. Commun. 7:10717. doi: 10.1038/ncomms10717

PubMed Abstract | CrossRef Full Text | Google Scholar

Xu, Q., Liu, Y. Y., Wang, X., Tan, G. H., Li, H. P., Hulbert, S. W., et al. (2018). Autism-associated CHD8 deficiency impairs axon development and migration of cortical neurons. Mol. Autism. 9:65. doi: 10.1186/s13229-018-0244-2

PubMed Abstract | CrossRef Full Text | Google Scholar

Yang, C., Li, J., Wu, Q., Yang, X., Huang, A. Y., Zhang, J., et al. (2018). AutismKB 2.0: A knowledgebase for the genetic evidence of autism spectrum disorder. Database 2018:bay106. doi: 10.1093/database/bay106

PubMed Abstract | CrossRef Full Text | Google Scholar

Yu, Y., Zhang, B., Ji, P., Zuo, Z., Huang, Y., Wang, N., et al. (2022). Changes to gut amino acid transporters and microbiome associated with increased E/I ratio in Chd8(+/−) mouse model of ASD-like behavior. Nat. Commun. 13:1151. doi: 10.1038/s41467-022-28746-2

PubMed Abstract | CrossRef Full Text | Google Scholar

Zeisel, A., Munoz-Manchado, A. B., Codeluppi, S., Lonnerberg, P., La Manno, G., Jureus, A., et al. (2015). Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. Science 347, 1138–1142. doi: 10.1126/science.aaa1934

PubMed Abstract | CrossRef Full Text | Google Scholar

Zhao, C., Dong, C., Frah, M., Deng, Y., Marie, C., Zhang, F., et al. (2018). Dual requirement of CHD8 for chromatin landscape establishment and histone methyltransferase recruitment to promote CNS myelination and repair. Dev. Cell 45:e758, 753–768.e8. doi: 10.1016/j.devcel.2018.05.022

PubMed Abstract | CrossRef Full Text | Google Scholar

Zhou, X., Feliciano, P., Shu, C., Wang, T., Astrovskaya, I., Hall, J. B., et al. (2022). Integrating de novo and inherited variants in 42,607 autism cases identifies mutations in new moderate-risk genes. Nat. Genet. 54, 1305–1319. doi: 10.1038/s41588-022-01148-2

PubMed Abstract | CrossRef Full Text | Google Scholar

Keywords: autism spectrum disorder, chromatin remodeling, sexual dimorphism, age dependence, synapse, transcriptome

Citation: Lee SY, Kweon H, Kang H and Kim E (2023) Age-differential sexual dimorphisms in CHD8-S62X-mutant mouse synapses and transcriptomes. Front. Mol. Neurosci. 16:1111388. doi: 10.3389/fnmol.2023.1111388

Received: 29 November 2022; Accepted: 18 January 2023;
Published: 16 February 2023.

Edited by:

Jun Aruga, Nagasaki University, Japan

Reviewed by:

Mohamad Reza Eskandari, Harvard Pilgrim Health Care and Harvard Medical School, United States
Chiara Verpelli, Department of Biomedical Sciences (CNR), Italy

Copyright © 2023 Lee, Kweon, Kang and Kim. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

*Correspondence: Eunjoon Kim, ✉ kime@kaist.ac.kr

These authors have contributed equally to this work

Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.