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Toll-like receptors (TLRs) are a unique category of pattern recognition receptors that recognize distinct pathogenic components, often utilizing the same set of downstream adaptors. Specific molecular features of extracellular, transmembrane (TM), and cytoplasmic domains of TLRs are crucial for coordinating the complex, innate immune signaling pathway. Here, we constructed a full-length structural model of TLR4—a widely studied member of the interleukin-1 receptor/TLR superfamily—using homology modeling, protein–protein docking, and molecular dynamics simulations to understand the differential domain organization of TLR4 in a membrane-aqueous environment. Results showed that each functional domain of the membrane-bound TLR4 displayed several structural transitions that are biophysically essential for plasma membrane integration. Specifically, the extracellular and cytoplasmic domains were partially immersed in the upper and lower leaflets of the membrane bilayer. Meanwhile, TM domains tilted considerably to overcome the hydrophobic mismatch with the bilayer core. Our analysis indicates an alternate dimerization or a potential oligomerization interface of TLR4-TM. Moreover, the helical properties of an isolated TM dimer partly agree with that of the full-length receptor. Furthermore, membrane-absorbed or solvent-exposed surfaces of the toll/interleukin-1 receptor domain are consistent with previous X-ray crystallography and biochemical studies. Collectively, we provided a complete structural model of membrane-bound TLR4 that strengthens our current understanding of the complex mechanism of receptor activation and adaptor recruitment in the innate immune signaling pathway.

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Original Research
25 September 2017
Flow cytometric analysis of surface PAD4 expression by stimulated neutrophils obtained from healthy donors. Flow cytometric analysis of surface PAD4 expression on non-permeabilized neutrophils from three healthy donors following treatment with various stimuli; medium alone (gray shaded) was used as a control. (A) Immune complexes (IC) (50 ng RNP plus 2% anti-RNP containing SLE serum) (red line) and the same IC diluted 1/3 (blue line), 1/9 (green line), 1/27 (purple line), and 1/81 (light blue line); (B) TNF-α, (C) PMA, (D) flagellin, (E) FSL-1, (F) IL-8. Concentrations of stimuli used in panels (B–F) were 10 ng/ml (red line), 3 ng/ml (blue line), and 1 ng/ml (green line), 0.3 ng/ml (purple line), and 0.1 ng/ml (light blue line). Bar graphs on the right shows the average mean fluorescence intensity (MFI) from the analysis of the three donors by paired t-test (*p < 0.05, **p < 0.01, nsp > 0.05).
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Frontiers in Immunology

The Role of Cytosolic Sensors in Host Defense to Intracellular Pathogens and Cancer
Edited by Sergio C. Oliveira, Glen N. Barber, Jose Carlos Alves-Filho, Karina Bortoluci, Guillermo Hernán Giambartolomei
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