Leaves: Regulatory networks underlying development and maintenance of the photosynthetic organ

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Molecular mechanism for cell cycle regulation. Four phases of cell cycle (G1, S, G2, and M) are operated by successive activation and deactivation of cyclin dependent kinases (CDKs). During the cell cycle these kinases bind with cyclins and get activated through phosphorylation by CDK activating kinases (CDKD and CDKF) whereas KRPs inhibit the complexes. G1 to S transition is controlled by CDKA–CYCD which phosphorylates the RBR proteins and releases the E2F transcription factor, which activates S phase related genes. The G2–M transition is dependent on CDKA/B and CYCA/B/D. The CDK complex is inactivated by phosphorylation through WEE1. The exit from mitosis requires proteolytic degradation of CYCs which as mediated by the Anaphase-Promoting Complex/Cyclosome (APC/C) bind with CCS52 and CDC20. Phytohormones like auxin, cytokinin, gibberellins (GA), brassinosteroids, abscisic acid (ABA) and methyl jasmonate (MeJA) impact cell cycle regulation at different points (pointed and T shaped arrows indicate positive and negative regulation and question mark indicates unknown regulation, respectively).
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bZIPs and WRKYs are two important plant transcription factor (TF) families regulating diverse developmental and stress-related processes. Since a partial overlap in these biological processes is obvious, it can be speculated that they fulfill non-redundant functions in a complex regulatory network. Here, we focus on the regulatory mechanisms that are so far described for bZIPs and WRKYs. bZIP factors need to heterodimerize for DNA-binding and regulation of transcription, and based on a bioinformatics approach, bZIPs can build up more than the double of protein interactions than WRKYs. In contrast, an enrichment of the WRKY DNA-binding motifs can be found in WRKY promoters, a phenomenon which is not observed for the bZIP family. Thus, the two TF families follow two different functional strategies in which WRKYs regulate each other’s transcription in a transcriptional network whereas bZIP action relies on intensive heterodimerization.

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