Skip to main content

ORIGINAL RESEARCH article

Front. Soil Sci.
Sec. Soil Biogeochemistry & Nutrient Cycling
Volume 4 - 2024 | doi: 10.3389/fsoil.2024.1501368

Denitrifying Microbial Genes Quantification Attests Inference for Potential N2O Emissions in Sugarcane Soils by Enzymatic Bioanalysis

Provisionally accepted
Luciano Ricardo de Oliveira Luciano Ricardo de Oliveira 1Dora Inés Kozusny-Andreani Dora Inés Kozusny-Andreani 1Gabriel Gustavo Tavares Nunes Monteiro Gabriel Gustavo Tavares Nunes Monteiro 2Ieda de Carvalho Mendes Ieda de Carvalho Mendes 3Raffaella Rossetto Raffaella Rossetto 4Luiz Sergio Vanzela Luiz Sergio Vanzela 1GISELE HERBST VAZQUEZ GISELE HERBST VAZQUEZ 1Acacio Aparecido Navarrete Acacio Aparecido Navarrete 1*
  • 1 Brazil University, São Paulo, São Paulo, Brazil
  • 2 University of São Paulo, São Paulo, Rio Grande do Sul, Brazil
  • 3 Brazilian Agricultural Research Corporation (EMBRAPA), Brasília, Distrito Federal, Brazil
  • 4 Instituto Agronômico de Campinas (IAC), Campinas, São Paulo, Brazil

The final, formatted version of the article will be published soon.

    This study evaluated the relationships and sensitivity of denitrifying microbial gene abundance, as well as the activities of soil enzymes β-glucosidase (GLU) and arylsulfatase (ARYL), to assess the quality of sugarcane soils managed with vinasse (V), filter cake (FC), and mineral fertilizer (MF). Composite soil samples were collected using a systematic sampling approach that included two soil classes (Ferralsol and Acrisol), two textures (clayey and sandy), three management systems (V, V+FC, and MF), two sampling seasons (rainy and dry), and three replicates, totaling 72 samples. Analysis of soil organic carbon (SOC), and macro- and micronutrients differentiated the Ferralsol and Acrisol samples into distinct groups based on agricultural management (Global R = 0.554) and showed some overlap based on soil texture (Global R = 0.369). The number of nirK, nirS, and nosZ I gene copies per gram of soil, determined by Real-Time Quantitative PCR (qPCR) based on genomic DNA isolated from the 72 soil samples, was higher in the rainy season compared to the dry season (P>0.05). None of the genes evaluated revealed a consistent response to different sugarcane soil managements, showing specific response patterns for each soil class and texture. In the Ferralsol, the activities of GLU and ARYL increased in the following order: V < MF < V+FC, regardless of soil texture (sandy or clayey) and sampling season. The average activity of the two enzymes in both V+FC and MF treatments was 1.8 times higher in sandy soil and 3.9 times higher in clayey soil compared to soil managed with vinasse. In the Acrisol, no significant differences among the treatments were observed. Statistical analyses revealed negative correlations (P<0.05) between the number of copies of the nirK and nosZ I genes and β-glucosidase and arylsulfatase activities in the soil during both seasonal periods analyzed. Thus, the indications of sugarcane soil quality based on enzymatic analyses were corroborated by the lower abundance of genes associated with denitrification process. The findings of this study open the possibilities to infer about the potential for N2O emission from these sugarcane soils based on β-glucosidase and arylsulfatase activities.

    Keywords: environmental DNA (eDNA), Microbial genes, Denitrification, Soil enzymes, soil bioanalysis technology

    Received: 25 Sep 2024; Accepted: 21 Nov 2024.

    Copyright: © 2024 Oliveira, Kozusny-Andreani, Monteiro, Mendes, Rossetto, Vanzela, HERBST VAZQUEZ and Navarrete. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence: Acacio Aparecido Navarrete, Brazil University, São Paulo, 15600, São Paulo, Brazil

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.