Skip to main content

REVIEW article

Front. Psychiatry, 12 January 2022
Sec. Addictive Disorders
This article is part of the Research Topic Genetic Analysis of Animal Models to Understand the Genomic Architecture of Substance Use Disorders View all 18 articles

What Have We Learned (or Expect to) From Analysis of Murine Genetic Models Related to Substance Use Disorders?

  • Department of Anesthesia, Pain and Perioperative Medicine, Stanford University School of Medicine, Stanford, CA, United States

The tremendous public health problem created by substance use disorders (SUDs) presents a major opportunity for mouse genetics. Inbred mouse strains exhibit substantial and heritable differences in their responses to drugs of abuse (DOA) and in many of the behaviors associated with susceptibility to SUD. Therefore, genetic discoveries emerging from analysis of murine genetic models can provide critically needed insight into the neurobiological effects of DOA, and they can reveal how genetic factors affect susceptibility drug addiction. There are already indications, emerging from our prior analyses of murine genetic models of responses related to SUDs that mouse genetic models of SUD can provide actionable information, which can lead to new approaches for alleviating SUDs. Lastly, we consider the features of murine genetic models that enable causative genetic factors to be successfully identified; and the methodologies that facilitate genetic discovery.

Why Study Murine Genetic Models of SUD?

We believe that the relationship between murine models and human diseases (or biomedical traits) resembles that between a small Cessna airplane and a large 787 jet plane. You can learn most of what you need to know about the fundamental principles of aviation by studying the Cessna, but this will not enable you to pilot the 787. The 787 has many more capabilities, much more complex and computer-controlled systems, and multiple redundancies that are essential for its function than are contained within a Cessna. Nevertheless, you wouldn't be able to pilot a 787 without knowing the aviation principals that are learned by studying the Cessna. Similarly, studying the mouse has revealed the basic principles underlying many areas of human physiology and pathobiology. Within the neurobiology realm, many of the mechanisms and circuits utilized for learning, memory, cognition, and the effects that drugs have on these processes have been uncovered through analysis of mouse models. However, since laboratory mice function within a very limited behavioral domain and lack some of the neural pathways that regulate human behavior, many of the complex factors mediating human psychiatric diseases cannot be understood by analyzing rodent models. The aviation analogy is quite appropriate for SUDs. Rodent models are ideal for understanding DOA neurobiology and for providing information about how drug seeking behaviors are generated; but they provide a very poor substrate for investigating the impact of that socioeconomic and psychosocial factors have on triggering relapse. This is an important limitation since human drug addiction proceeds through a three-stage cycle whose intensity increases over time, and each stage results from DOA-induced changes in brain circuits (13). The first stage (binge/intoxication) is mediated by DOA-induced reward sensations in the brain. The second stage (withdrawal/negative affect) is characterized by an increased threshold for experiencing the reward sensation, and a withdrawal state develops when the DOA cannot be obtained. The third stage (preoccupation-relapse) is characterized by chronic relapse, which is triggered by environmental and emotional cues. Chronic DOA ingestion induces neurochemical changes that lessen the reward sensation that was experienced after DOA ingestion during the initial stage, which increases the stress and compulsivity associated with chronic drug addiction (2, 3). Mouse models are ideal for analyzing the first two stages of the addiction cycle, which are mediated by neurobiological changes that develop after acute (1st stage) or repeated (2nd stage) exposure to a DOA. In contrast, mice provide a less optimal model for analyzing 3rd stage phenomena, which involves responses to environmental triggers and far more complex DOA-induced changes that impact a wider range of neural circuits. Most current research and treatment efforts focus on the later stages of drug addiction (3), which are associated with drug craving and relapse in individuals with SUD of long duration. It could be more productive to increase the research effort devoted to developing prevention strategies, which target the early stage of drug addiction (4). To do this, we must develop a deeper understanding of DOA-induced changes at the synaptic level. In other words, to fly the jet plane (i.e., develop effective prevention or treatment methods for SUDs) we must use murine genetic models of SUD to understand the underlying principles of aviation (i.e., the mechanisms mediating SUDs).

Here, we examine what we have learned from our prior analyses of murine genetic models of responses related to SUD. First, we discuss a murine genetic model of a drug-induced toxicity to indicate the different types of genetic factors that can be identified. We then we review the genetic factors identified from our prior analyses of murine genetic models of opiate responses. Lastly, we consider the features of murine models that enable causative genetic factors to be successfully identified; and the methodologies that can facilitate genetic discovery.

An Illustrative Example

Analysis of a murine genetic model of a drug-induced (haloperidol) CNS toxicity illustrates the potential outcomes that could emerge when evaluating murine genetic models of SUD because drug addiction (in many ways) is a toxicity caused by DOAs. Although haloperidol is an effective anti-psychotic agent, it causes a treatment-limiting side effect in most treated subjects, which is very debilitating Parkinsonian-like extrapyramidal symptoms. When we began our studies of haloperidol induced toxicity (HIT), genetic susceptibility factors for this toxicity were completely unknown. Therefore, we analyzed a murine genetic model of HIT where the inbred strains exhibited very large and reproducible differences in susceptibility to HIT. Our analysis revealed that susceptibility was quantitatively determined by two distinct genetic loci: one encoded a pharmacokinetic factor and the other a pharmacodynamic factor. The pharmacokinetic factor was allelic variation within a murine ABC-drug efflux transporter (Abcb5) that caused susceptible strains to have higher brain haloperidol levels; and a genetic association study in a haloperidol-treated human cohort identified human ABCB5 alleles as susceptibility determinants for HIT (5). The pharmacodynamic susceptibility factor was allelic variation within pantetheinase genes (Vnn1, Vnn3) that impaired the biosynthesis of a protective metabolite (cysteamine) (6). While discovery of the murine pharmacokinetic factor led to the identification of a pharmacogenetic susceptibility factor for human HIT (5); characterization of the murine pharmacodynamic factor led to a potential new treatment (co-administration of a cysteamine metabolite) that could completely prevent haloperidol's treatment-limiting toxicity (6). Thus, analysis of a murine model generated information that produced a potential new method for preventing this toxicity.

Murine SUD Models

Like haloperidol, murine opiate response models hold great promise for genetic discovery. The inbred strains exhibit very large and heritable differences in their responses to opiates, which include the development of opioid analgesia, tolerance, dependence, and hyperalgesia (710). We provide a brief description of several rodent SUD models here, but more detailed information can be obtained from recent reviews covering rodent models for CPP (11), opioid (12, 13) and cocaine relapse (14), and opioid abstinence (15). The genetic models of SUD discussed here are ones where various responses are measured after DOAs are administered to panels of inbred mouse strains. For example, physical dependence is a key measure of addiction that is modeled by the jumping behavior that is displayed by opiate-dependent mice after administration of a potent opioid receptor antagonist (naloxone). This response is a highly heritable trait among inbred mouse strains (16) that is independent of differences in the method or duration of opiate administration (17, 18) (Figure 1). Of importance, naloxone-precipitated opiate withdrawal (NPOW) has also been used to quantify opioid dependence in human volunteers (19). In addition to their analgesic action, opioids also induce a paradoxical hypersensitivity to painful stimuli during opioid withdrawal (opiate-induced hyperalgesia, OIH); and there are large and heritable differences in the extent of OIH that develops among the inbred strains (7, 20). Drug seeking behavior is observed when abstaining addicts are confronted with environmental stimuli associated with their drug-taking behavior. Some features of the behavior of human opiate addicts can be modeled in mice using the morphine-induced conditioned place preference (mCPP) test (2124). In the mCPP paradigm, morphine administration is paired with a particular spatial environment, and then a mouse's preference for this environment is measured to evaluate the rewarding properties of morphine. The OIH, NPOW and mCPP models measure phenomena in mice that are associated with the 2nd stage of the addiction cycle. OIH and withdrawal symptoms can serve as driving forces that promote relapse or escalation of drug intake. As such, the genetic factors identified from analysis of these models are ones that influence susceptibility to an SUD. Behavioral sensitization paradigms, which measure an increase in drug-induced behavior that gradually develops after a period of repeated DOA exposure, can also be used to study cross-sensitization amongst different DOA. Cross-sensitization studies using behavioral sensitization paradigms has identified the neural mechanisms and pathways that are shared by different types of DOA (25, 26). However, since these models are based on non-contingent (i.e., experimenter-initiated) drug administration, they lack face validity, which is the degree to which the model measures what it claims to. This aspect of addiction could be better studied using contingent models that assess the motivation for drug-taking or the reinstatement of drug-seeking behaviors (27).

FIGURE 1
www.frontiersin.org

Figure 1. Analysis of a murine genetic model of naloxone precipitated opiate withdrawal (NPOW). (Top) Eighteen strains (eight mice per strain) were treated for four days with morphine to establish physical dependence. On the 5th day, the number of jumps made during the 15-min period after naloxone injection was measured to indicate the degree of opioid dependence. (Middle) The data represent the mean number of jumps for each indicated strain. (Bottom) The NPOW data (mean number of jumps for each strain) was analyzed by haplotype based computational genetic mapping. The 10 most strongly correlated haplotype blocks are shown. For each block, the chromosomal location, number of SNPs within a block and its gene symbol are listed. For each gene, the haplotypes are represented by a colored block, and the blocks are presented in the same rank order as the phenotypic data. Strains sharing the same haplotype have the same-colored block. The calculated p-value measures the probability that the strain groupings within a block would have the same degree of association with the phenotypic data by random chance. The genetic effect indicates the fraction of the inter-strain variance that is potentially attributable to the haplotype.

Inbred strains also exhibit substantial and heritable differences in their cocaine responses, which include the extent of cocaine-induced locomotor activation (28, 29), cocaine self-administration (CSA) (3033); and SUD risk-related behaviors that include impulsivity, and sensitivity to drug reward (33). Of the various addiction-related phenotypes studied in mice, the gold standard is operant self-administration (34, 35), where the subjects voluntarily and actively seek and consume drugs with rewarding properties. Rodents, like humans, experience the rewarding effects of a DOA, and they will engage in behaviors to procure them. To measure CSA, mice are fitted with an indwelling jugular catheter and placed in an operant conditioning box where they must depress a lever to trigger cocaine infusions. The rate of CSA reflects the reinforcing potential of cocaine (36). The substantial differences in CSA among the inbred strains (3033) reflects their different propensities to abuse cocaine (3739). There are obvious benefits from using a contingent model like CSA, since it more accurately recapitulates the drug-taking and drug-seeking behaviors of humans. The motivation (the reinforcing properties of the drug reward) as well as the specificity (drug vs. alternative reward) for drug-taking behaviors can also be evaluated in addition to measuring the quantity and frequency of drug administration (27, 40, 41). Thus, just as in the human population, inbred mouse strains exhibit substantial differences in their DOA responses; and characterization of the genetic basis for these differences will help us to understand the neurobiological effects of DOA and will enable us to understand how they generate addiction-related behaviors.

Lessons Learned From Characterizing Murine Opiate Response Factors

As with HIT, multiple studies indicate that differences in the various types of opiate responses exhibited by inbred strains are determined by genetic factors that alter opiate pharmacokinetics and by pharmacodynamic factors that alter the host response to opiates. When a murine genetic model of opioid-induced hyperalgesia (OIH) was analyzed, we discovered that genetic variation within the P-glycoprotein transporter (Abcb1b) contributed to inter-strain differences in this opiate response (8). Analysis of the effect of pharmacologic inhibitors and of Abcb1a/1b knockout mice confirmed that P-glycoprotein function modulates narcotic-induced pain sensitization, as well as the tolerance and physical dependence that develops during opiate treatment. The brain morphine level correlated with the extent of OIH, which indicated a murine pharmacokinetic factor influenced multiple opiate pharmacodynamic responses by altering brain opiate levels. While pharmacokinetic factors are important, characterization of genetic factors affecting opiate pharmacodynamic responses are more likely to generate new approaches for preventing opiate addiction. For example, we analyzed another murine genetic model for OIH and identified the beta-2 adrenergic receptor (Adrb2) as a genetic locus contributing to the inter-strain response difference. This response was markedly diminished in Adrb2 knockout mice and was reversed by administration of a commonly used Adrb2 antagonist, which suggested a novel strategy for reducing OIH (7). We also found that genetic variation within genes encoding the Netrin-1 receptor (Dcc) (42) and multi-PDZ-domain protein (Mpdz that encodes MUPP1) (20) also contributed to inter-strain differences in the extent of tolerance, dependence and OIH that develops after repeated opiate exposure.

The latter two genetic findings indicate that opiate-induced changes at the synaptic level influence opiate responses. For example, dcc encodes a receptor for an axonal guidance protein (netrin-1) that plays a role in synaptic plasticity in the adult brain (4346); and dcc itself plays a role in axonal differentiation and synaptogenesis in the developing brain (44, 4648). Similarly, MUPP1 expression is localized to CNS synapses (49). Genetic variation within Mpdz has been associated with alcohol and sedative dependence in both mice and humans, which suggest that it may regulate responses to multiple DOA (5052). MUPP1 may enhance the efficiency of neuronal signaling by bringing key intracellular signaling molecules into proximity with cell surface receptors (NMDA receptor) at the post-synaptic membrane (53). By this mechanism, NMDA receptor activation can trigger a MUPP1-facilitated cascade that leads to membrane insertion of AMPA receptor/channels, and persistent facilitation of glutamate signaling. This pathway may contribute to long-term potentiation (LTP) or alternative forms of enhanced AMPA receptor mediated activity (54). Pharmacological blockade of NMDA receptors and genetic deletion of NMDA receptor subunits has been shown to limit tolerance and OIH in mice and rats (55, 56); and the NR2B subunits of NMDA receptors mediate opiate tolerance (57, 58). The dcc and Mpdz findings also demonstrate that even when an identified causative genetic factor is not a pharmaceutic target, interacting proteins or proteins within an effected pathway may provide new therapeutic targets for SUD.

Translation of a Mouse Genetic Discovery

Our most impactful discovery to date emerged from analysis of a murine genetic model that measured the naloxone-precipitated opiate withdrawal (NPOW) response after 4 days of morphine administration in 18 inbred strains (9). Allelic variation within the Htr3a gene encoding the 5HT3AR was most highly correlated with the severity of the NPOW response (Figure 1). Consistent with this result, Htr3a mRNA and protein expression was significantly reduced in a strain-specific manner after morphine administration. Moreover, administration of a selective 5HT3AR antagonist (ondansetron) reduced NPOW [and opioid-induced hyperalgesia (OIH)] in a dose-dependent fashion; and ondansetron co-administration with morphine impaired the mCPP response, which indicated that ondansetron eliminated the reinforcing effects of morphine (9). Thus, ondansetron also shows promise for preventing opiate dependence. The murine finding was tested in humans by measuring the effect of ondansetron on experimentally induced NPOW in healthy male volunteers. Ondansetron pre-treatment caused a 76% decrease (p = 0.03) in the NPOW in the volunteers, and it decreased all 11 of the measured manifestations of opiate withdrawal. Since the ondansetron effect observed in mice translated to humans, it is likely of fundamental importance. In a separate study (59), we demonstrated that another 5HT3AR antagonist (palonosetron) also prevented NPOW symptoms in normal human subjects and that a pretreatment that combined palonosetron with a commonly used antihistamine (hydroxyzine) caused a 95% reduction (p = 0.014) in withdrawal manifestations. The effect of the combination pretreatment was significant even when compared with that of palonosetron alone (p = 0.012) (59). These results demonstrated that a 5HT3AR antagonist can be combined with another agent to further reduce opioid withdrawal severity. Ondansetron is a widely used medication with a well-established safety record. After characterizing its pharmacokinetic properties in pregnant women and in their neonates (60), we are now performing a placebo-controlled clinical trial investigating whether a brief period of ondansetron treatment can prevent the development of opiate withdrawal symptoms in infants with prenatal opioid exposure (61, 62). This study, which has involved seven medical centers, currently represents the only attempt to develop a preventative treatment for a severe condition that effects the infants of mothers with SUD.

Genetic Analysis Methods

Identification of the genetic factors responsible for DOA response differences among the inbred strains is an essential step for obtaining critically needed information about the neurobiological mechanisms underlying addiction. Only after a genetic factor is identified can the involved pathways be examined, which is required for identifying potential targets for new treatments for SUD. We have found that two inter-related features of a murine genetic model facilitate genetic discovery when genome wide association study (GWAS) methods are used for their analysis. (i) The DOA response must be measured across a large number (preferably > 15) of inbred strains. When a small number of strains are evaluated, the actual extent of the phenotypic variation present in the mouse population is under-estimated (63, 64). There are >450 available inbred strains (65); and usually only a few strains will exhibit an outlier phenotype for most responses. Unfortunately, the vast majority of murine GWAS performed to date analyze a relatively small number of strains (66). (ii) Since a key factor for successful genetic discovery is when strains that exhibit outlier responses are included in the analysis, the genetic analysis should not begin until after inbred strains that exhibit extreme DOA responses (i.e., top or bottom 10% and are >3-fold above (or below) the mean response of the other strains) have been identified. Preferably, the strain panel should include at least two strains that exhibit an extreme phenotypic response. Other investigators have used one or more of the various recombinant inbred (RI) strain panels for genetic mapping studies, which include: the Hybrid Mouse Diversity Panel (30 founder strains) (67, 68); the Diversity Outbred (69) and Collaborative Cross (70) panels (eight strains); and the BXD RI panel (71) (two strains). While these RI panels have proven to be useful for genetic mapping, they have a limitation. We do not know in advance which strains will exhibit outlier responses to current (or future) DOA that contribute to 21st century addiction-related public health problems, and the strains exhibiting outlier responses may not be among the founder strains for the existing RI panels. To use another disease as an example, Type 2 Diabetes Mellitus (T2DM), and its principal risk factor (obesity) have become a major 21st century public health problem (72); but the TallyHo strain is not among the founder strains used to construct any of the current RI panels. Nevertheless, TallyHo provides a valuable murine model for T2DM and obesity because it spontaneously develops hyperlipidemia, hyperglycemia, insulin resistance, and glucose intolerance (73, 74). A genetic analysis of diabetes—related traits among the inbred strains would miss important disease-causing genetic variants if the TallyHo strain was not included in the analysis.

While many different methods can be used to analyze GWAS data obtained from inbred stains, we have successfully used haplotype based computational genetic mapping (HBCGM) to identify murine genetic factors underlying 22 biomedical traits (59, 18, 20, 42, 64, 7590). In an HBCGM experiment, a property of interest is measured in a panel of available mouse strains whose genomes have been sequenced; and then genetic factors are computationally predicted by identifying genomic regions (haplotype blocks) where the pattern of within-block genetic variation correlates with the distribution of the phenotypic responses among the strains (63, 64, 75) (Figure 1). However, a major barrier to genetic discovery is caused by the fact that HBCGM analyses generate many false positive associations, which appear along with the causative genomic region, for the trait response difference. This can make it difficult to identify the true causative genetic factor for a biomedical trait difference. Because of the ancestral relatedness of the inbred strains, some of the false positives are within genomic regions that are commonly inherited (a property referred to as “population structure”). Statistical methods have been developed to reduce the false discovery rate in GWAS studies by correcting for the population structure that exists that exists in humans (91, 92), plants (93), and mice (94). While these correction methods have substantial utility for analyzing human GWAS results, we have recently shown that population structure correction methods are less useful when analyzing murine GWAS results; and moreover, their use could increase the chance that a true causative genetic factor will be discarded (95). In brief, even though multiple genomic regions have a shared ancestral inheritance, one of them may be responsible for a phenotypic difference. To overcome this problem, we use filtering methods to identify the true causative factor from among the many correlated genomic regions. We have previously identified causative genetic factors from among the many genes with correlated allelic patterns by applying orthogonal criteria (64), which include gene expression, metabolomic (78), or curated biologic data (96), or by examining candidates within previously identified genomic regions (76, 77). This approach can provide results that are superior to that of a typical GWAS, which only uses a single highly stringent criterion to identify candidates. We recently analyzed 8,462 publicly available datasets of biomedical responses (1.52 M individual datapoints) measured in panels of inbred mouse strains. We found that our ability to identify the genetic basis for the biomedical trait differences among the inbred strains was enhanced when structured automated methods were used for filtering the genes output by HBCGM analyses (66). In that study, we selected correlated genes that were expressed in the target organ for the biomedical trait, had high impact SNP alleles, and where the published literature indicated that the gene had a functional relationship with the analyzed trait. Although we are in the early stage of using automated methods for assessing genetic results, we believe that the results from that study (66) provide an early indication of how “augmented intelligence” can be used to facilitate genetic discovery. For analysis of mouse genetic models for SUD, DOA-induced gene expression changes occurring in brain regions, which are known to be important sites for DOA responses (NAc, VTA, mPFC), can be analyzed to facilitate identification of causative genetic factors.

Future Directions

We believe that genetic factors affecting DOA responses will be shared with those impacting learning and memory pathways (97). Multiple lines of evidence indicate that DOA “hijack” the neural circuits used for learning and memory (98100). An organism's ability to learn and form memories is mediated by changes within neurons and brain circuits that are produced by changes in neuronal gene expression patterns, which are activated in response to stimuli (101). Synaptic plasticity, which are activity-based changes in synaptic transmission in neuronal networks, is a major component of learning and memory (102). Changes in presynaptic glutamate release as well as postsynaptic ionotropic glutamate receptor expression and subunit composition are associated with DOA-induced changes in neuroplasticity (103). Rapidly occurring changes in synaptic plasticity mediate DOA-induced behavioral effects, and they contribute to the acquisition of instrumental learning. By this mechanism, DOA-induced changes in synaptic plasticity can produce abnormally strong addiction-related memories. The effect of DOA on long-term potentiation (LTP) and long-term depression (LTD) has been well-studied in VTA dopaminergic neurons (104106). For instance, cocaine exposure increases the AMPA/NMDA receptor ratio, alters GluA2-containing AMPARs, and decreases NMDA receptor functionality in VTA dopaminergic neurons (107109). Structural plasticity, which is the formation of new synaptic boutons and dendritic spines, is also observed after DOA exposure (110). Increased dendritic spine density in the NAc and PFC are commonly observed changes in synaptic connections that contribute to the sequela of drug use (111113). Circuit remodeling also occurs with DOA-induced dopamine-mediated responses. Specifically, DOA act on the mesolimbic dopaminergic pathway, which include the ventral tegmental area (VTA), nucleus accumbens (NAc) and associated limbic regions (114). The medial prefrontal cortex (mPFC), which exerts top-down excitatory glutamatergic control over the NAc and other downstream subcortical regions, might contribute to maladaptive behaviors (115). Different subregions of the mPFC (i.e., dorsal, and ventral infralimbic subregions) can both drive and inhibit drug seeking behaviors depending on the drug history and behavioral context (116). Dysfunction in these regions, such as hypoactivity or selective strengthening of the PFC-striatal pathway, could contribute to compulsion in drug addiction models (116, 117). Therefore, studying DOA-induced effects on synaptic and structural plasticity, as well as characterizing changes in neuronal circuitries, could greatly increase our understanding of DOA responses. Moreover, given the overlap between the neural circuits used for learning and those impacted by DOA, it is likely that there will be some degree of overlap between the genetic factors affecting responses to different types of abused drugs. Hence, it is also important to characterize the impact that genetic factors identified by analysis of mouse genetic models have on responses to different types of DOAs.

In addition to the transcriptional changes associated with neuronal plasticity, chromatin modifications are a major part of learning and memory processes (118121). Much correlational evidence links changes in histones (predominantly acetylation) with short and long-term memory generation (121123). Since the addiction state persists long after the period of DOA ingestion, DOA-induced epigenetic modifications are highly likely to be key contributors to addiction. Hence, DOA-induced chromatin structure changes in specific brain regions should be characterized along with DOA-induced transcriptional changes. The combined characterization of transcriptional and chromatin structure changes in the developing human brain has provided new insight into the mechanisms regulating brain development, and possibly into the pathobiology of psychiatric diseases (124). The methodology for simultaneously characterizing DOA-induced epigenetic and transcriptional changes in brain is now readily available (124). Characterization of DOA-induced chromatin structure changes in specific brain regions will provide the orthogonal information, which will facilitate the identification of genetic factors affecting addiction susceptibility. To do this, chromosomal regions with DOA-induced epigenetic changes can be examined to determine if they overlap with haplotype blocks that contain alleles that correlate with the pattern of DOA responses among the inbred strains. Also, linking genetic and epigenetic mechanisms with changes in synaptic circuit plasticity could lead to a deeper understanding of DOA-induced neuroadaptations (115) (Figure 2). For instance, DOA exposure produces region-specific epigenetic changes, which include an increase in global histone acetylation in the NAc, while this is reduced in the VTA (125, 126). Studying transcriptional and epigenetic changes in specific neuronal subpopulations is also important for understanding neural mechanisms and identifying novel therapeutic targets for prevention of addiction (127, 128). Thus, we believe that murine genetic models can be used to simultaneously characterize DOA-induced epigenetic and transcriptional changes, and for identifying genetic factors that alter DOA responses. Thus, murine models can provide the critically needed information that is required for successfully landing the airplanes whose flight path has been adversely affected by SUDs.

FIGURE 2
www.frontiersin.org

Figure 2. Image depicting how a mouse genetic model of a response related to a SUD can be analyzed to identify the genetic factors, epigenetic changes and the alterations in neurocircuits caused by a DOA. This diagram was created using BioRender.com software.

Author Contributions

All authors listed have made a substantial, direct, and intellectual contribution to the work and approved it for publication.

Funding

This work was supported by a NIH/NIDA award (5U01DA04439902) to GP.

Conflict of Interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Publisher's Note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

Abbreviations

CSA, cocaine self-administration; DOA, drugs of abuse; GWAS, genome wide association study; HBCGM, haplotype based computational genetic mapping; HIT, haloperidol induced toxicity; mCPP, morphine-induced conditioned place preference; NPOW, naloxone precipitated opiate withdrawal; NAc, nucleus accumbens; SUD, substance use disorder; VTA, ventral tegmental area.

References

1. Koob GF, Ahmed SH, Boutrel B, Chen SA, Kenny PJ, Markou A, et al. Neurobiological mechanisms in the transition from drug use to drug dependence. Neurosci Biobehav Rev. (2004) 27:739–49. doi: 10.1016/j.neubiorev.2003.11.007

PubMed Abstract | CrossRef Full Text | Google Scholar

2. Koob GF. Negative reinforcement in drug addiction: the darkness within. Curr Opin Neurobiol. (2013) 23:559–63. doi: 10.1016/j.conb.2013.03.011

PubMed Abstract | CrossRef Full Text | Google Scholar

3. Koob GF, Volkow ND. Neurobiology of addiction: a neurocircuitry analysis. Lancet Psychiatry. (2016) 3:760–73. doi: 10.1016/S2215-0366(16)00104-8

PubMed Abstract | CrossRef Full Text | Google Scholar

4. Peltz G, Sudhof TC. The neurobiology of opioid addiction and the potential for prevention strategies. JAMA. (2018) 319:2071–2. doi: 10.1001/jama.2018.3394

PubMed Abstract | CrossRef Full Text | Google Scholar

5. Zheng M, Zhang H, Dill DL, Clark JD, Tu S, Yablonovitch AL, et al. The role of Abcb5 alleles in susceptibility to haloperidol-induced toxicity in mice and humans PLoS Med. (2015) 12:e1001782. doi: 10.1371/journal.pmed.1001782

PubMed Abstract | CrossRef Full Text | Google Scholar

6. Zhang H, Zheng M, Wu M, Xu D, Nishimura T, Nishimura Y, et al. A Pharmacogenetic Discovery: Cystamine Protects against Haloperidol-Induced Toxicity and Ischemic Brain Injury. Genetics. (2016) 203:599–609. doi: 10.1534/genetics.115.184648

PubMed Abstract | CrossRef Full Text | Google Scholar

7. Liang D, Liao G, Wang J, Usuka J, Guo YY, Peltz G, et al. A genetic analysis of opioid-induced hyperalgesia in mice Anesthesiology. (2006) 104:1054–62. doi: 10.1097/00000542-200605000-00023

PubMed Abstract | CrossRef Full Text | Google Scholar

8. Liang DY, Liao G, Lighthall G, Peltz G, Clark JD. Genetic variants of the P-glycoprotein gene abcb1b modulate opioid-induced hyperalgesia, tolerance and dependence. Pharmacogenet Genomics. (2006) 16:825–35. doi: 10.1097/01.fpc.0000236321.94271.f8

PubMed Abstract | CrossRef Full Text | Google Scholar

9. Chu LF, Liang D-Y, Li X, Sahbaie P, D'arcy N, Liao G, et al. From mouse to man: the 5-HT3 receptor modulates physical dependence on opioid narcotics. Pharmacogenet. Genomics. (2009) 19, 193–205. doi: 10.1097/FPC.0b013e328322e73d

PubMed Abstract | CrossRef Full Text | Google Scholar

10. Liang DY, Li X, Clark JD. 5-hydroxytryptamine type 3 receptor modulates opioid-induced hyperalgesia and tolerance in mice. Anesthesiology. (2011) 114:1180–9. doi: 10.1097/ALN.0b013e31820efb19

PubMed Abstract | CrossRef Full Text | Google Scholar

11. Mckendrick G, Graziane NM. Drug-induced conditioned place preference and its practical use in substance use disorder research. Front Behav Neurosci. (2020) 14:582147. doi: 10.3389/fnbeh.2020.582147

PubMed Abstract | CrossRef Full Text | Google Scholar

12. Golden SA, Jin M, Shaham Y. Animal models of (or for) aggression reward, addiction, and relapse: behavior and circuits. J Neurosci. (2019) 39:3996–4008. doi: 10.1523/JNEUROSCI.0151-19.2019

PubMed Abstract | CrossRef Full Text | Google Scholar

13. Reiner DJ, Fredriksson I, Lofaro OM, Bossert JM, Shaham Y. Relapse to opioid seeking in rat models: behavior, pharmacology and circuits. Neuropsychopharmacology. (2019) 44:465–77. doi: 10.1038/s41386-018-0234-2

PubMed Abstract | CrossRef Full Text | Google Scholar

14. Farrell MR, Schoch H, Mahler SV. Modeling cocaine relapse in rodents: behavioral considerations and circuit mechanisms. Prog Neuropsychopharmacol Biol Psychiatry. (2018) 87:33–47. doi: 10.1016/j.pnpbp.2018.01.002

PubMed Abstract | CrossRef Full Text | Google Scholar

15. Welsch L, Bailly J, Darcq E, Kieffer BL. The negative affect of protracted opioid abstinence: progress and perspectives from rodent models. Biol Psychiatry. (2020) 87:54–63. doi: 10.1016/j.biopsych.2019.07.027

PubMed Abstract | CrossRef Full Text | Google Scholar

16. Kest B, Palmese CA, Juni A, Chesler EJ, Mogil JS. Mapping of a quantitative trait locus for morphine withdrawal severity. Mamm Genome. (2004) 15:610–7. doi: 10.1007/s00335-004-2367-3

PubMed Abstract | CrossRef Full Text | Google Scholar

17. Kest B, Hopkins E, Palmese CA, Adler M, Mogil JS. Genetic variation in morphine analgesic tolerance: a survey of 11 inbred mouse strains. Pharmacol Biochem Behav. (2002) 73:821–8. doi: 10.1016/S0091-3057(02)00908-5

PubMed Abstract | CrossRef Full Text | Google Scholar

18. Liang DY, Guo T, Liao G, Kingery WS, Peltz G, Clark JD. Chronic pain and genetic background interact and influence opioid analgesia, tolerance, and physical dependence. Pain. (2006) 121:232–40. doi: 10.1016/j.pain.2005.12.026

PubMed Abstract | CrossRef Full Text | Google Scholar

19. Bickel WK, Stitzer ML, Wazlavek BE, Liebson IA. Naloxone-precipitated withdrawal in humans after acute morphine administration. NIDA Res Monogr. (1986) 67:349–54.

PubMed Abstract | Google Scholar

20. Donaldson R, Sun Y, Liang D-Y, Zheng M, Sahbaie P, Dill DL, et al. The multiple PDZ domain protein Mpdz/MUPP1 regulates opioid tolerance and opioid-induced hyperalgesia. BMC Genomics. (2016) 17. doi: 10.1186/s12864-016-2634-1

PubMed Abstract | CrossRef Full Text | Google Scholar

21. Bardo MT, Rowlett JK, Harris MJ. Conditioned place preference using opiate and stimulant drugs: a meta-analysis. Neurosci Biobehav Rev. (1995) 19:39–51. doi: 10.1016/0149-7634(94)00021-R

PubMed Abstract | CrossRef Full Text | Google Scholar

22. Tzschentke TM. Measuring reward with the conditioned place preference paradigm: a comprehensive review of drug effects, recent progress and new issues. Prog Neurobiol. (1998) 56:613–72. doi: 10.1016/S0301-0082(98)00060-4

PubMed Abstract | CrossRef Full Text | Google Scholar

23. Tzschentke TM. Measuring reward with the conditioned place preference (CPP) paradigm: update of the last decade. Addict Biol. (2007) 12:227–462. doi: 10.1111/j.1369-1600.2007.00070.x

PubMed Abstract | CrossRef Full Text | Google Scholar

24. Aguilar MA, Rodriguez-Arias M, Minarro J. Neurobiological mechanisms of the reinstatement of drug-conditioned place preference. Brain Res Rev. (2009) 59:253–77. doi: 10.1016/j.brainresrev.2008.08.002

PubMed Abstract | CrossRef Full Text | Google Scholar

25. Vanderschuren LJ, Tjon GH, Nestby P, Mulder AH, Schoffelmeer AN, De Vries TJ. Morphine-induced long-term sensitization to the locomotor effects of morphine and amphetamine depends on the temporal pattern of the pretreatment regimen. Psychopharmacology (Berl). (1997) 131:115–22. doi: 10.1007/s002130050273

PubMed Abstract | CrossRef Full Text | Google Scholar

26. Vanderschuren LJ, Schmidt ED, De Vries TJ, Van Moorsel CA, Tilders FJ, Schoffelmeer AN. A single exposure to amphetamine is sufficient to induce long-term behavioral, neuroendocrine, and neurochemical sensitization in rats. J Neurosci. (1999) 19:9579–86. doi: 10.1523/JNEUROSCI.19-21-09579.1999

PubMed Abstract | CrossRef Full Text | Google Scholar

27. Kuhn BN, Kalivas PW, Bobadilla AC. Understanding addiction using animal models. Front Behav Neurosci. (2019) 13:262. doi: 10.3389/fnbeh.2019.00262

PubMed Abstract | CrossRef Full Text | Google Scholar

28. Eisener-Dorman AF, Grabowski-Boase L, Tarantino LM. Cocaine locomotor activation, sensitization and place preference in six inbred strains of mice. Behav Brain Funct. (2011) 7:29. doi: 10.1186/1744-9081-7-29

PubMed Abstract | CrossRef Full Text | Google Scholar

29. Wiltshire T, Ervin RB, Duan H, Bogue MA, Zamboni WC, Cook S, et al. Initial locomotor sensitivity to cocaine varies widely among inbred mouse strains. Genes Brain Behav. (2015) 14:271–80. doi: 10.1111/gbb.12209

PubMed Abstract | CrossRef Full Text | Google Scholar

30. Cervantes MC, Laughlin RE, Jentsch JD. Cocaine self-administration behavior in inbred mouse lines segregating different capacities for inhibitory control. Psychopharmacology (Berl). (2013) 229:515–25. doi: 10.1007/s00213-013-3135-4

PubMed Abstract | CrossRef Full Text | Google Scholar

31. Roberts AJ, Casal L, Huitron-Resendiz S, Thompson T, Tarantino LM. Intravenous cocaine self-administration in a panel of inbred mouse strains differing in acute locomotor sensitivity to cocaine. Psychopharmacology (Berl). (2018) 235:1179–89. doi: 10.1007/s00213-018-4834-7

PubMed Abstract | CrossRef Full Text | Google Scholar

32. Bagley JR, Khan AH, Smith DJ, Jentsch JD. Extreme phenotypic diversity in operant responding for an intravenous cocaine or saline infusion in the hybrid mouse diversity panel. BioRxiv [Preprint]. (2021). Available Online at: https://www.biorxiv.org/content/10.1101/2021.02.03.429584v1

Google Scholar

33. Bailey LS, Bagley JR, Dodd R, Olson A, Bolduc M, Philip VM, et al. Heritable variation in locomotion, reward sensitivity and impulsive behaviors in a genetically diverse inbred mouse panel. BioRxiv [Preprint]. (2021). doi: 10.1111/gbb.12773

PubMed Abstract | CrossRef Full Text | Google Scholar

34. Weeks JR, Collins RJ. Factors affecting voluntary morphine intake in self-maintained addicted rats. Psychopharmacologia. (1964) 6:267–79. doi: 10.1007/BF00413156

PubMed Abstract | CrossRef Full Text | Google Scholar

35. Collins RJ, Weeks JR, Cooper MM, Good PI, Russell RR. Prediction of abuse liability of drugs using IV self-administration by rats. Psychopharmacology (Berl). (1984) 82:6–13. doi: 10.1007/BF00426372

PubMed Abstract | CrossRef Full Text | Google Scholar

36. Woolverton WL. Determinants of cocaine self-administration by laboratory animals. Ciba Found Symp. (1992) 166:149–161; discussion 161–144. doi: 10.1002/9780470514245.ch9

PubMed Abstract

37. Jentsch JD, Taylor JR. Impulsivity resulting from frontostriatal dysfunction in drug abuse: implications for the control of behavior by reward-related stimuli. Psychopharmacology (Berl). (1999) 146:373–90. doi: 10.1007/PL00005483

PubMed Abstract | CrossRef Full Text | Google Scholar

38. de Wit H, Phillips TJ. Do initial responses to drugs predict future use or abuse? Neurosci Biobehav Rev. (2012) 36:1565–76. doi: 10.1016/j.neubiorev.2012.04.005

PubMed Abstract | CrossRef Full Text | Google Scholar

39. Piazza PV, Deroche-Gamonet V. A multistep general theory of transition to addiction. Psychopharmacology (Berl). (2013) 229:387–413. doi: 10.1007/s00213-013-3224-4

PubMed Abstract | CrossRef Full Text | Google Scholar

40. Richardson NR, Roberts DC. Progressive ratio schedules in drug self-administration studies in rats: a method to evaluate reinforcing efficacy. J Neurosci Methods. (1996) 66:1–11. doi: 10.1016/0165-0270(95)00153-0

PubMed Abstract | CrossRef Full Text | Google Scholar

41. Venniro M, Zhang M, Caprioli D, Hoots JK, Golden SA, Heins C, et al. Volitional social interaction prevents drug addiction in rat models. Nat Neurosci. (2018) 21:1520–9. doi: 10.1038/s41593-018-0246-6

PubMed Abstract | CrossRef Full Text | Google Scholar

42. Liang DY, Zheng M, Sun Y, Sahbaie P, Low SA, Peltz G, et al. The Netrin-1 receptor DCC is a regulator of maladaptive responses to chronic morphine administration. BMC Genomics. (2014) 15:345. doi: 10.1186/1471-2164-15-345

PubMed Abstract | CrossRef Full Text | Google Scholar

43. Bradford D, Cole SJ, Cooper HM. Netrin-1: diversity in development. Int J Biochem Cell Biol. (2009) 41:487–93. doi: 10.1016/j.biocel.2008.03.014

PubMed Abstract | CrossRef Full Text | Google Scholar

44. Rajasekharan S, Kennedy TE. The netrin protein family. Genome Biol. (2009) 10:239. doi: 10.1186/gb-2009-10-9-239

PubMed Abstract | CrossRef Full Text | Google Scholar

45. Yetnikoff L, Eng C, Benning S, Flores C. Netrin-1 receptor in the ventral tegmental area is required for sensitization to amphetamine. Eur J Neurosci. (2010) 31:1292–302. doi: 10.1111/j.1460-9568.2010.07163.x

PubMed Abstract | CrossRef Full Text | Google Scholar

46. Horn KE, Glasgow SD, Gobert D, Bull SJ, Luk T, Girgis J, et al. DCC expression by neurons regulates synaptic plasticity in the adult brain. Cell Rep. (2013) 3:173–85. doi: 10.1016/j.celrep.2012.12.005

PubMed Abstract | CrossRef Full Text | Google Scholar

47. Manitt C, Mimee A, Eng C, Pokinko M, Stroh T, Cooper HM, et al. The netrin receptor DCC is required in the pubertal organization of mesocortical dopamine circuitry. J Neurosci. (2011) 31:8381–94. doi: 10.1523/JNEUROSCI.0606-11.2011

PubMed Abstract | CrossRef Full Text | Google Scholar

48. Goldman JS, Ashour MA, Magdesian MH, Tritsch NX, Harris SN, Christofi N, et al. Netrin-1 promotes excitatory synaptogenesis between cortical neurons by initiating synapse assembly. J Neurosci. (2013) 33:17278–89. doi: 10.1523/JNEUROSCI.1085-13.2013

PubMed Abstract | CrossRef Full Text | Google Scholar

49. Sitek B, Poschmann G, Schmidtke K, Ullmer C, Maskri L, Andriske M, et al. Expression of MUPP1 protein in mouse brain. Brain Res. (2003) 970:178–87. doi: 10.1016/S0006-8993(03)02338-2

PubMed Abstract | CrossRef Full Text | Google Scholar

50. Shirley RL, Walter NA, Reilly MT, Fehr C, Buck KJ. Mpdz is a quantitative trait gene for drug withdrawal seizures. Nat Neurosci. (2004) 7:699–700. doi: 10.1038/nn1271

PubMed Abstract | CrossRef Full Text | Google Scholar

51. Karpyak VM, Kim JH, Biernacka JM, Wieben ED, Mrazek DA, Black JL, et al. Sequence variations of the human MPDZ gene and association with alcoholism in subjects with European ancestry. Alcohol Clin Exp Res. (2009) 33:712–21. doi: 10.1111/j.1530-0277.2008.00888.x

PubMed Abstract | CrossRef Full Text | Google Scholar

52. Ehlers CL, Walter NA, Dick DM, Buck KJ, Crabbe JC. A comparison of selected quantitative trait loci associated with alcohol use phenotypes in humans and mouse models. Addict Biol. (2010) 15:185–99. doi: 10.1111/j.1369-1600.2009.00195.x

PubMed Abstract | CrossRef Full Text | Google Scholar

53. Krapivinsky G, Medina I, Krapivinsky L, Gapon S, Clapham DE. SynGAP-MUPP1-CaMKII synaptic complexes regulate p38 MAP kinase activity and NMDA receptor-dependent synaptic AMPA receptor potentiation. Neuron. (2004) 43:563–74. doi: 10.1016/j.neuron.2004.08.003

PubMed Abstract | CrossRef Full Text | Google Scholar

54. Rama S, Krapivinsky G, Clapham DE, Medina I. The MUPP1-SynGAPalpha protein complex does not mediate activity-induced LTP. Mol Cell Neurosci. (2008) 38:183–8. doi: 10.1016/j.mcn.2008.02.007

PubMed Abstract | CrossRef Full Text | Google Scholar

55. Miyamoto Y, Yamada K, Nagai T, Mori H, Mishina M, Furukawa H, et al. Behavioural adaptations to addictive drugs in mice lacking the NMDA receptor epsilon1 subunit. Eur J Neurosci. (2004) 19:151–8. doi: 10.1111/j.1460-9568.2004.03086.x

PubMed Abstract | CrossRef Full Text | Google Scholar

56. Inturrisi CE. The role of N-methyl-D-aspartate (NMDA) receptors in pain and morphine tolerance. Minerva Anestesiol. (2005) 71:401–3.

PubMed Abstract | Google Scholar

57. Ko SW, Wu LJ, Shum F, Quan J, Zhuo M. Cingulate NMDA NR2B receptors contribute to morphine-induced analgesic tolerance. Mol Brain. (2008) 1:2. doi: 10.1186/1756-6606-1-2

PubMed Abstract | CrossRef Full Text | Google Scholar

58. Liaw WJ, Zhu XG, Yaster M, Johns RA, Gauda EB, Tao YX. Distinct expression of synaptic NR2A and NR2B in the central nervous system and impaired morphine tolerance and physical dependence in mice deficient in postsynaptic density-93 protein. Mol Pain. (2008) 4:45. doi: 10.1186/1744-8069-4-45

PubMed Abstract | CrossRef Full Text | Google Scholar

59. Erlendson MJ, D'arcy N, Encisco EM, Yu JJ, Rincon-Cruz L, Peltz G., et al. Palonosetron and hydroxyzine pre-treatment reduces the objective signs of experimentally-induced acute opioid withdrawal in humans: a double-blinded, randomized, placebo-controlled crossover study. Am J Drug Alcohol Abuse. (2017) 43:78–86. doi: 10.1080/00952990.2016.1210614

PubMed Abstract | CrossRef Full Text

60. Elkomy M, Sultan P, Carvalho B, Peltz G, Wu M, Clavijo C, et al. Ondansetron pharmacokinetics in pregnant women and neonates: towards a new treatment for neonatal abstinence syndrome. Clin Pharmacol Ther. (2015) 97:167–76. doi: 10.1002/cpt.5

PubMed Abstract | CrossRef Full Text | Google Scholar

61. Maas U, Kattner E, Weingart-Jesse B, Schafer A, Obladen M. Infrequent neonatal opiate withdrawal following maternal methadone detoxification during pregnancy. J Perinat Med. (1990) 18:111–8. doi: 10.1515/jpme.1990.18.2.111

PubMed Abstract | CrossRef Full Text | Google Scholar

62. American Academy of Pediatrics Committee on Drugs. Neonatal drug withdrawal. Pediatrics. (1998) 101:1079–86. doi: 10.1542/peds.101.6.1079

CrossRef Full Text | Google Scholar

63. Wang J, Liao G, Usuka J, Peltz G. Computational genetics: from mouse to man? Trends in Genetics. (2005) 21:526–32. doi: 10.1016/j.tig.2005.06.010

PubMed Abstract | CrossRef Full Text | Google Scholar

64. Zheng M, Dill D, Peltz G. A better prognosis for genetic association studies in mice. Trends Genet. (2012) 28:62–9. doi: 10.1016/j.tig.2011.10.006

PubMed Abstract | CrossRef Full Text | Google Scholar

65. Beck JA, Lloyd S, Hafezparast M, Lennon-Pierce M, Eppig JT, Festing MF, et al. Genealogies of mouse inbred strains. Nat Genet. (2000) 24:23–5. doi: 10.1038/71641

PubMed Abstract | CrossRef Full Text | Google Scholar

66. Arslan A, Guan Y, Chen X, Donaldson R, Zhu W, Ford M, et al. High throughput computational mouse genetic analysis. BioRxiv. (2020). doi: 10.1101/2020.09.01.278465

CrossRef Full Text | Google Scholar

67. Tewhey R, Bansal V, Torkamani A, Topol EJ, Schork NJ. The importance of phase information for human genomics. Nat Rev Genet. (2011) 12:215–23. doi: 10.1038/nrg2950

PubMed Abstract | CrossRef Full Text | Google Scholar

68. Ghazalpour A, Rau CD, Farber CR, Bennett BJ, Orozco LD, Van Nas A, et al. Hybrid mouse diversity panel: a panel of inbred mouse strains suitable for analysis of complex genetic traits. Mamm Genome. (2012) 23:680–92. doi: 10.1007/s00335-012-9411-5

PubMed Abstract | CrossRef Full Text | Google Scholar

69. Chick JM, Munger SC, Simecek P, Huttlin EL, Choi K, Gatti DM, et al. Defining the consequences of genetic variation on a proteome-wide scale. Nature. (2016) 534:500–5. doi: 10.1038/nature18270

PubMed Abstract | CrossRef Full Text | Google Scholar

70. Chesler EJ, Miller DR, Branstetter LR, Galloway LD, Jackson BL, Philip VM, et al. The collaborative cross at Oak ridge national laboratory: developing a powerful resource for systems genetics. Mamm Genome. (2008) 19:382–9. doi: 10.1007/s00335-008-9135-8

PubMed Abstract | CrossRef Full Text | Google Scholar

71. Belknap JK, Crabbe JC. Chromosome mapping of gene loci affecting morphine and amphetamine responses in BXD recombinant inbred mice. Ann N Y Acad Sci. (1992) 654:311–23. doi: 10.1111/j.1749-6632.1992.tb25977.x

PubMed Abstract | CrossRef Full Text | Google Scholar

72. Centers for Disease Control Prevention (2020). National Diabetes Statistics Report, 2020. Atlanta, GA (2020). Available online at: https://www.cdc.gov/diabetes/data/statistics-report/index.html?CDC_AA_refVal=https%3A%2F%2F (accessed August 28, 2020).

Google Scholar

73. Kim JH, Saxton AM. The TALLYHO mouse as a model of human type 2 diabetes. Methods Mol Biol. (2012) 933:75–87. doi: 10.1007/978-1-62703-068-7_6

PubMed Abstract | CrossRef Full Text | Google Scholar

74. Kim JH, Sen S, Avery CS, Simpson E, Chandler P, Nishina PM, et al. Genetic analysis of a new mouse model for non-insulin-dependent diabetes. Genomics. (2001) 74:273–86. doi: 10.1006/geno.2001.6569

PubMed Abstract | CrossRef Full Text | Google Scholar

75. Liao G, Wang J, Guo J, Allard J, Chang J, Nguyen A, et al. In Silico genetics: identification of a novel functional element regulating H2-Ea gene expression. Science. (2004) 306:690–5. doi: 10.1126/science.1100636

PubMed Abstract | CrossRef Full Text | Google Scholar

76. Smith SB, Marker CL, Perry C, Liao G, Sotocinal SG, Austin JS, et al. Quantitative trait locus and computational mapping identifies Kcnj9 (GIRK3) as a candidate gene affecting analgesia from multiple drug classes. Pharmacogenet Genomics. (2008) 18:231–41. doi: 10.1097/FPC.0b013e3282f55ab2

PubMed Abstract | CrossRef Full Text | Google Scholar

77. LaCroix-Fralish ML, Mo G, Smith SB, Sotocinal SG, Ritchie JG, Austin JS, et al. The β3 Subunit of the Na+,K+-ATPase affects pain sensitivity. Pain. (2009) 144:294–302. doi: 10.1016/j.pain.2009.04.028

PubMed Abstract | CrossRef Full Text

78. Liu H-H, Lu P, Guo Y, Farrell E, Zhang X, Zheng M, et al. An integrative genomic analysis identifies bhmt2 as a diet-dependent genetic factor protecting against acetaminophen-induced liver toxicity Genome Res. (2010) 20:28–35. doi: 10.1101/gr.097212.109

PubMed Abstract | CrossRef Full Text | Google Scholar

79. Liu HH, Hu Y, Zheng M, Suhoski MM, Engleman EG, Dill DL, et al. Cd14 SNPs regulate the innate immune response. Mol Immunol. (2012) 51:112–27.

PubMed Abstract | Google Scholar

80. Grupe A, Germer S, Usuka J, Aud D, Belknap JK, Klein RF, et al. In silico mapping of complex disease-related traits in mice. Science. (2001) 92: 1915–8. doi: 10.1126/science.1058889

PubMed Abstract | CrossRef Full Text | Google Scholar

81. Rozzo SJ, Allard J, Choubey D, Vyse T, Izui S, Peltz G, et al. Evidence for an interferon-inducible gene, Ifi202, in the susceptibility to systemic lupus. Immunity. (2001) 15:435–43. doi: 10.1016/s1074-7613(01)00196-0

PubMed Abstract | CrossRef Full Text | Google Scholar

82. Guo YY, Weller PF, Farrell E, Cheung P, Fitch B, Clark D, et al. In silico pharmacogenetics: warfarin metabolism. Nat Biotechnol. (2006) 24:531–6. doi: 10.1038/nbt1195

PubMed Abstract | CrossRef Full Text | Google Scholar

83. Guo YY, Liu P, Zhang X, Weller PMM, Wang J, Liao G, et al. In vitro and in silico pharmacogenetic analysis in mice. Proc Natl Acad of Sci USA. (2007) 104:17735–40. doi: 10.1073/pnas.0700724104

PubMed Abstract | CrossRef Full Text | Google Scholar

84. Zaas AK, Liao G, Chein J, Usuka J, Weinberg C, Shore D, et al. Plasminogen alleles influence susceptibility to invasive aspergillosis. PLoS genetic. (2008) 4:e1000101. doi: 10.1371/journal.pgen.1000101

PubMed Abstract | CrossRef Full Text | Google Scholar

85. Tregoning JS, Yamaguchi Y, Wang B, Mihm D, Harker JA, Bushell ESC, et al. Genetic susceptibility to the delayed sequelae of RSV infection is MHC-dependent, but modified by other genetic loci. J Immunol. (2010) 185:5384–91. doi: 10.4049/jimmunol.1001594

PubMed Abstract | CrossRef Full Text

86. Hu Y, Liang D, Li X, Liu H-H, Zhang X, Zheng M, et al. The role of IL-1 in wound biology part I: murine in silico and in vitro experimental analysis. Anesth Analg. (2010) 111: 1525–33. doi: 10.1213/ANE.0b013e3181f5ef5a

PubMed Abstract | CrossRef Full Text | Google Scholar

87. Hu Y, Liang D, Li X, Liu H-H, Zhang X, Zheng M, et al. The role of IL-1 in wound biology part II: in vivo and human translational studies. Anesth Analg. (2010) 111:1534–42. doi: 10.1213/ANE.0b013e3181f691eb

PubMed Abstract | CrossRef Full Text | Google Scholar

88. Peltz G, Zaas AK, Zheng M, Solis NV, Zhang MX, Liu H-H, et al. Next-generation computational genetic analysis: multiple complement alleles control survival after candida albicans infection. Infect Immun. (2011) 79:4472–9. doi: 10.1128/IAI.05666-11

PubMed Abstract | CrossRef Full Text | Google Scholar

89. Sorge RE, Trang T, Dorfman R, Smith SB, Beggs S, Ritchie J, et al. Genetically determined P2X7 receptor pore formation regulates variability in chronic pain sensitivity. Nat Med. (2012) 18:595–9. doi: 10.1038/nm.2710

PubMed Abstract | CrossRef Full Text | Google Scholar

90. Ren M, Kazemian M, Zheng M, He J, Li P, Oh J, et al. Transcription factor p73 regulates Th1 differentiation. Nat Commun. (2020) 11:1475. doi: 10.1038/s41467-020-15172-5

PubMed Abstract | CrossRef Full Text | Google Scholar

91. Reich DE, Goldstein DB. Detecting association in a case-control study while correcting for population stratification. Genet Epidemiol. (2001) 20:4–16.

PubMed Abstract | Google Scholar

92. Yu J, Pressoir G, Briggs WH, Vroh Bi I, Yamasaki M, Doebley JF, et al. A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nat Genet. (2006) 38:203–8. doi: 10.1038/ng1702

PubMed Abstract | CrossRef Full Text | Google Scholar

93. Zhao K, Aranzana MJ, Kim S, Lister C, Shindo C, Tang C, et al. An arabidopsis example of association mapping in structured samples. PLoS Genet. (2007) 3:e4. doi: 10.1371/journal.pgen.0030004

PubMed Abstract | CrossRef Full Text | Google Scholar

94. Kang HM, Zaitlen NA, Wade CM, Kirby A, Heckerman D, Daly MJ, et al. Efficient control of population structure in model organism association mapping. Genetics. (2008) 178:1709–23. doi: 10.1534/genetics.107.080101

PubMed Abstract | CrossRef Full Text | Google Scholar

95. Wang M, Fang Z, Yoo B, Bejerano G, Peltz G. The effect of population structure on murine genome-wide association studies. Front Genet. (2021) 12:745361. doi: 10.3389/fgene.2021.745361

PubMed Abstract | CrossRef Full Text | Google Scholar

96. Zhang X, Liu H-H, Weller P, Tao W, Wang J, Liao G, et al. In silico and in vitro pharmacogenetics: aldehyde oxidase rapidly metabolizes a p38 kinase inhibitor. Pharmacogenomics J. (2011) 11:15–24. doi: 10.1038/tpj.2010.8

PubMed Abstract | CrossRef Full Text | Google Scholar

97. Nestler EJ. Cellular basis of memory for addiction. Dialogues Clin Neurosci. (2013) 15:431–43. doi: 10.31887/DCNS.2013.15.4/enestler

CrossRef Full Text | Google Scholar

98. Nestler EJ. Molecular basis of long-term plasticity underlying addiction. Nat Rev Neurosci. (2001) 2:119–28. doi: 10.1038/35053570

PubMed Abstract | CrossRef Full Text | Google Scholar

99. Nestler EJ. Is there a common molecular pathway for addiction? Nat Neurosci. (2005) 8:1445–9. doi: 10.1038/nn1578

PubMed Abstract | CrossRef Full Text | Google Scholar

100. Russo SJ, Dietz DM, Dumitriu D, Morrison JH, Malenka RC, Nestler EJ. The addicted synapse: mechanisms of synaptic and structural plasticity in nucleus accumbens. Trends Neurosci. (2010) 33:267–76. doi: 10.1016/j.tins.2010.02.002

PubMed Abstract | CrossRef Full Text | Google Scholar

101. Guzman-Karlsson MC, Meadows JP, Gavin CF, Hablitz JJ, Sweatt JD. Transcriptional and epigenetic regulation of Hebbian and non-Hebbian plasticity. Neuropharmacology. (2014) 80:3–17. doi: 10.1016/j.neuropharm.2014.01.001

PubMed Abstract | CrossRef Full Text | Google Scholar

102. Citri A, Malenka RC. Synaptic plasticity: multiple forms, functions, and mechanisms. Neuropsychopharmacology. (2008) 33:18–41. doi: 10.1038/sj.npp.1301559

PubMed Abstract | CrossRef Full Text | Google Scholar

103. Volkow ND, Michaelides M, Baler R. the neuroscience of drug reward and addiction. Physiol Rev. (2019) 99:2115–40. doi: 10.1152/physrev.00014.2018

PubMed Abstract | CrossRef Full Text | Google Scholar

104. Thomas MJ, Malenka RC, Bonci A. Modulation of long-term depression by dopamine in the mesolimbic system. J Neurosci. (2000) 20:5581–6. doi: 10.1523/JNEUROSCI.20-15-05581.2000

PubMed Abstract | CrossRef Full Text | Google Scholar

105. Jones S, Bonci A. Synaptic plasticity and drug addiction. Curr Opin Pharmacol. (2005) 5:20–5. doi: 10.1016/j.coph.2004.08.011

PubMed Abstract | CrossRef Full Text | Google Scholar

106. Liu QS, Pu L, Poo MM. Repeated cocaine exposure in vivo facilitates LTP induction in midbrain dopamine neurons. Nature. (2005) 437:1027–31. doi: 10.1038/nature04050

PubMed Abstract | CrossRef Full Text | Google Scholar

107. Bellone C, Luscher C. Cocaine triggered AMPA receptor redistribution is reversed in vivo by mGluR-dependent long-term depression. Nat Neurosci. (2006) 9:636–41. doi: 10.1038/nn1682

PubMed Abstract | CrossRef Full Text | Google Scholar

108. Mameli M, Balland B, Lujan R, Luscher C. Rapid synthesis and synaptic insertion of GluR2 for mGluR-LTD in the ventral tegmental area. Science. (2007) 317:530–3. doi: 10.1126/science.1142365

PubMed Abstract | CrossRef Full Text | Google Scholar

109. Cheron J, Kerchove d'Exaerde A. Drug addiction: from bench to bedside. Transl Psychiatry. (2021) 11:424. doi: 10.1038/s41398-021-01542-0

PubMed Abstract | CrossRef Full Text | Google Scholar

110. Solinas M, Belujon P, Fernagut PO, Jaber M, Thiriet N. Dopamine and addiction: what have we learned from 40 years of research. J Neural Transm (Vienna). (2019) 126:481–516. doi: 10.1007/s00702-018-1957-2

PubMed Abstract | CrossRef Full Text | Google Scholar

111. Robinson TE, Kolb B. Structural plasticity associated with exposure to drugs of abuse. Neuropharmacology. (2004) 47(Suppl 1):33–46. doi: 10.1016/j.neuropharm.2004.06.025

PubMed Abstract | CrossRef Full Text | Google Scholar

112. Lee KW, Kim Y, Kim AM, Helmin K, Nairn AC, Greengard P. Cocaine-induced dendritic spine formation in D1 and D2 dopamine receptor-containing medium spiny neurons in nucleus accumbens. Proc Natl Acad Sci U S A. (2006) 103:3399–404. doi: 10.1073/pnas.0511244103

PubMed Abstract | CrossRef Full Text | Google Scholar

113. Dos Santos M, Cahill EN, Bo GD, Vanhoutte P, Caboche J, Giros B, et al. Cocaine increases dopaminergic connectivity in the nucleus accumbens. Brain Struct Funct. (2018) 223:913–23. doi: 10.1007/s00429-017-1532-x

PubMed Abstract | CrossRef Full Text | Google Scholar

114. Kauer JA, Malenka RC. Synaptic plasticity and addiction. Nat Rev Neurosci. (2007) 8:844–58. doi: 10.1038/nrn2234

PubMed Abstract | CrossRef Full Text | Google Scholar

115. Nestler EJ, Luscher C. The molecular basis of drug addiction: linking epigenetic to synaptic and circuit mechanisms. Neuron. (2019) 102:48–59. doi: 10.1016/j.neuron.2019.01.016

PubMed Abstract | CrossRef Full Text | Google Scholar

116. Moorman DE, James MH, Mcglinchey EM, Aston-Jones G. Differential roles of medial prefrontal subregions in the regulation of drug seeking. Brain Res. (2015) 1628:130–46. doi: 10.1016/j.brainres.2014.12.024

PubMed Abstract | CrossRef Full Text | Google Scholar

117. Pascoli V, Hiver A, Van Zessen R, Loureiro M, Achargui R, Harada M, et al. Stochastic synaptic plasticity underlying compulsion in a model of addiction. Nature. (2018) 564:366–71. doi: 10.1038/s41586-018-0789-4

PubMed Abstract | CrossRef Full Text | Google Scholar

118. Rudenko A, Dawlaty MM, Seo J, Cheng AW, Meng J, Le T, et al. Tet1 is critical for neuronal activity-regulated gene expression and memory extinction. Neuron. (2013) 79:1109–22. doi: 10.1016/j.neuron.2013.08.003

PubMed Abstract | CrossRef Full Text | Google Scholar

119. Sweatt JD. The emerging field of neuroepigenetics. Neuron. (2013) 80:624–32. doi: 10.1016/j.neuron.2013.10.023

PubMed Abstract | CrossRef Full Text | Google Scholar

120. Zovkic IB, Guzman-Karlsson MC, Sweatt JD. Epigenetic regulation of memory formation and maintenance. Learn Mem. (2013) 20:61–74. doi: 10.1101/lm.026575.112

PubMed Abstract | CrossRef Full Text | Google Scholar

121. Lopez-Atalaya JP, Barco A. Can changes in histone acetylation contribute to memory formation? Trends Genet. (2014) 30:529–39. doi: 10.1016/j.tig.2014.09.003

PubMed Abstract | CrossRef Full Text | Google Scholar

122. Gupta S, Kim SY, Artis S, Molfese DL, Schumacher A, Sweatt JD, et al. Histone methylation regulates memory formation. J Neurosci. (2010) 30:3589–99. doi: 10.1523/JNEUROSCI.3732-09.2010

PubMed Abstract | CrossRef Full Text | Google Scholar

123. Halder R, Hennion M, Vidal RO, Shomroni O, Rahman RU, Rajput A, et al. DNA methylation changes in plasticity genes accompany the formation and maintenance of memory. Nat Neurosci. (2016) 19:102–10. doi: 10.1038/nn.4194

PubMed Abstract | CrossRef Full Text | Google Scholar

124. Trevino AE, Muller F, Andersen J, Sundaram L, Kathiria A, Shcherbina A, et al. Chromatin and gene-regulatory dynamics of the developing human cerebral cortex at single-cell resolution. Cell. (2021) 184:5053–69.e5023. doi: 10.1016/j.cell.2021.07.039

PubMed Abstract | CrossRef Full Text | Google Scholar

125. Martin TA, Jayanthi S, Mccoy MT, Brannock C, Ladenheim B, Garrett T, et al. Methamphetamine causes differential alterations in gene expression and patterns of histone acetylation/hypoacetylation in the rat nucleus accumbens. PLoS ONE. (2012) 7:e34236. doi: 10.1371/journal.pone.0034236

PubMed Abstract | CrossRef Full Text | Google Scholar

126. Arora DS, Nimitvilai S, Teppen TL, Mcelvain MA, Sakharkar AJ, You C, et al. Hyposensitivity to gamma-aminobutyric acid in the ventral tegmental area during alcohol withdrawal: reversal by histone deacetylase inhibitors. Neuropsychopharmacology. (2013) 38:1674–84. doi: 10.1038/npp.2013.65

PubMed Abstract | CrossRef Full Text | Google Scholar

127. Mews P, Calipari ES. Cross-talk between the epigenome and neural circuits in drug addiction. Prog Brain Res. (2017) 235:19–63. doi: 10.1016/bs.pbr.2017.08.012

PubMed Abstract | CrossRef Full Text | Google Scholar

128. Salery M, Trifilieff P, Caboche J, Vanhoutte P. From signaling molecules to circuits and behaviors: cell-type-specific adaptations to psychostimulant exposure in the striatum. Biol Psychiatry. (2020) 87:944–53. doi: 10.1016/j.biopsych.2019.11.001

PubMed Abstract | CrossRef Full Text | Google Scholar

Keywords: mouse genetic models, substance use disorder, neurobiologic basis, computational genetics, opiate addiction

Citation: Peltz G and Tan Y (2022) What Have We Learned (or Expect to) From Analysis of Murine Genetic Models Related to Substance Use Disorders? Front. Psychiatry 12:793961. doi: 10.3389/fpsyt.2021.793961

Received: 12 October 2021; Accepted: 09 December 2021;
Published: 12 January 2022.

Edited by:

Roberto Ciccocioppo, University of Camerino, Italy

Reviewed by:

Candice Contet, The Scripps Research Institute, United States
Sade Monique Spencer, University of Minnesota Twin Cities, United States

Copyright © 2022 Peltz and Tan. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

*Correspondence: Gary Peltz, gpeltz@stanford.edu

Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.