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ORIGINAL RESEARCH article

Front. Plant Sci.
Sec. Plant Abiotic Stress
Volume 15 - 2024 | doi: 10.3389/fpls.2024.1413716
This article is part of the Research Topic Chilling Tolerance and Regulation of Horticultural Crops: Physiological, Molecular, and Genetic Perspectives View all 11 articles

Comparison of transcriptome and metabolome analysis revealed cold-resistant metabolic pathways in cucumber roots under low-temperature stress in root zone

Provisionally accepted
Shijun Sun Shijun Sun 1Yan Yang Yan Yang 2Shuiyuan Hao Shuiyuan Hao 1Ye Liu Ye Liu 1Xin Zhang Xin Zhang 1Pudi Yang Pudi Yang 1Xundong Zhang Xundong Zhang 1Yusong Luo Yusong Luo 3*
  • 1 Hetao College, Bayannur, Inner Mongolia, China
  • 2 Other, Banyannur, China
  • 3 Hunan Agricultural University, Changsha, China

The final, formatted version of the article will be published soon.

    Low ground temperature is a major factor limiting overwintering in cucumber cultivation facilities in northern alpine regions. Lower temperatures in the root zone directly affect the physiological function of the root system, which in turn affects the normal physiological activity of plants. However, the importance of the ground temperature in facilities has not attracted sufficient attention. Therefore, this study tested the cucumber variety Jinyou 35 under three root zone temperatures (room temperature, 20-22 ℃; suboptimal temperature, 13-15 ℃; and low temperature, 8-10 ℃) to investigated possible cold resistance mechanisms in the root of cucumber seedlings through hormone, metabolomics, and transcriptomics analyses. The results showed that cucumber roots were subjected to chilling stress at different temperatures. Hormone analysis indicated that auxin content was highest in the roots. Jasmonic acid and strigolactone participated in the low-temperature stress response. Auxin and jasmonate are key hormones that regulate the response of cucumber roots to low temperatures.Phenolic acid was the most abundant metabolite in cucumber roots under chilling stress. Additionally, triterpenes may play an important role in chilling resistance.Differentially expressed genes and metabolites were significantly enriched in benzoxazinoid biosynthesis in the room temperature vs. suboptimal temperature groups and the room temperature vs. low temperature groups. Most differentially expressed transcription factor genes in AP2/ERF were strongly induced in cucumber roots by both suboptimal and low-temperature stress conditions. These results provide guidance for the cultivation of cucumber in facilities.

    Keywords: cucumber1, root2, cold-resistant3, transcriptome4, metabolome5

    Received: 07 Apr 2024; Accepted: 10 Jun 2024.

    Copyright: © 2024 Sun, Yang, Hao, Liu, Zhang, Yang, Zhang and Luo. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence: Yusong Luo, Hunan Agricultural University, Changsha, China

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