The final, formatted version of the article will be published soon.
ORIGINAL RESEARCH article
Front. Plant Sci.
Sec. Plant Genetics, Epigenetics and Chromosome Biology
Volume 15 - 2024 |
doi: 10.3389/fpls.2024.1338572
Giant Kelp Genetic Variation Patterns
Provisionally accepted- University of Southern California, Los Angeles, United States
Giant kelp (Macrocystis pyrifera) is a paramount species with immense ecological and economic importance. It forms dense underwater forests, providing crucial habitat and serving as a foundation species for diverse marine ecosystems. Giant kelp contributes to coastal ecosystem health, carbon sequestration, and is farmed for feedstock, cosmetics, and pharmaceuticals. Understanding giant kelp's genetics is essential for conservation and sustainable farming, safeguarding these valuable ecosystems and their benefits. By analyzing mutations based on their impact, we can facilitate insights into the potential functional consequences and implications for an organism, helping to identify critical genes or regions that may play a significant role in adaptation, development, and environmental response. For that, we annotated the effects and impact of spontaneous mutations in 559 giant kelp individuals from four different populations -mutations were classified into modifier, low, moderate, and high impact depending on their predicted effect. The creation of this mutation effect database attached to the seedbank of these individuals can have several applications, including enhancing breeding programs, aiding genetic engineering using naturally occurring mutations, and developing strategies to mitigate the impact of environmental changes.
Keywords: Macrocystis pyrifera, Giant kelp, Genetics, Mutation, knockout, seedbank Improving gene annotation
Received: 21 Nov 2023; Accepted: 16 Dec 2024.
Copyright: © 2024 Diesel, Molano and Nuzhdin. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
* Correspondence:
Sergey Nuzhdin, University of Southern California, Los Angeles, United States
Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.