ORIGINAL RESEARCH article
Front. Pharmacol.
Sec. Experimental Pharmacology and Drug Discovery
Volume 16 - 2025 | doi: 10.3389/fphar.2025.1467504
This article is part of the Research TopicApproaches to improve the performance of virtual screening: scoring functions, structural filtration, prediction of physicochemical properties/pharmacological activityView all 6 articles
Stress Signaling and Programmed Cell Death in Breast
Provisionally accepted- 1Shaoxing People's Hospital, Shaoxing, Zhejiang Province, China
- 2Wuhan Institute of Bioengineering, Wuhan, Hubei, China
- 3Huazhong University of Science and Technology, Wuhan, China
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Objective: This study aimed to identify critical therapeutic targets and design potent antitumor compounds for breast cancer treatment through an integrated bioinformatics and computational chemistry approach. Methods: We conducted initial screening and target intersection analysis to identify potential protein targets, highlighting the adenosine A1 receptor as a key candidate. Molecular docking and molecular dynamics (MD) simulations were performed to evaluate the binding stability between selected compounds and the human adenosine A1 receptor-Gi2 protein complex (PDB ID: 7LD3). A pharmacophore model was constructed based on binding information to guide the virtual screening of additional compounds with activity. Furthermore, we designed and synthesized a novel molecule based on this model, followed by in vitro biological evaluation using MCF-7 breast cancer cells. Results: Compound 5 exhibited stable binding to the adenosine A1 receptor, as confirmed by docking and MD simulations. Pharmacophore-based screening identified compounds 6–9 with strong binding affinities. These findings guided Molecule 10, which was rationally designed and synthesized, showing potent antitumor activity against MCF-7 cells with an IC50 value of 0.032 µM, significantly outperforming the positive control 5-FU (IC50 = 0.45 µM). Conclusion: This study advances the understanding of molecular interactions in breast cancer therapy and demonstrates the potential of Molecule 10 as a highly effective therapeutic candidate. Integrating reverse drug screening, molecular modelling, and in vitro validation provides a robust platform for future drug discovery in breast cancer treatment.
Keywords: breast cancer, molecular docking, THE ADENOSINE A1 RECEPTOR protein, targeted therapy, Computational analysis review and editing, Xue Li., visualization, Xue Li., supervision, 583 Xue Li., project administration, Xue Li.
Received: 20 Jul 2024; Accepted: 14 Apr 2025.
Copyright: © 2025 xu, li and 贾. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
* Correspondence:
xue li, Wuhan Institute of Bioengineering, Wuhan, Hubei, China
一多 贾, Huazhong University of Science and Technology, Wuhan, China
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