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ORIGINAL RESEARCH article

Front. Pharmacol.
Sec. Pharmacology of Infectious Diseases
Volume 15 - 2024 | doi: 10.3389/fphar.2024.1465827
This article is part of the Research Topic Emerging and Reemerging Neglected Tropical Diseases: Epidemiology, Transmission, Mitigation, and Vaccines and Chemotherapy Advancements View all 6 articles

Computational Identification of Vernonia cinerea-Derived Phytochemicals as Potential Inhibitors of Nonstructural Protein 1 (NSP1) in Dengue Virus Serotype-2

Provisionally accepted
Md Shohel Hossain Md Shohel Hossain 1Soharth Hasnat Soharth Hasnat 2Shilpy Akter Shilpy Akter 3Maria M. Mim Maria M. Mim 1Anika Tahcin Anika Tahcin 4Majedul Hoque Majedul Hoque 1Durjoy Sutradhar Durjoy Sutradhar 1Mst Alifa Mst Alifa 1Namin R. Sium Namin R. Sium 1Sophia Hossain Sophia Hossain 5Runa Masuma Runa Masuma 1Sakhawat Hossen Rakib Sakhawat Hossen Rakib 6Md.Aminul Islam Md.Aminul Islam 7Tofazzal Islam Tofazzal Islam 8*Prosun Bhattacharya Prosun Bhattacharya 9*M. Nazmul Hoque M. Nazmul Hoque 10*
  • 1 Jahangirnagar University, Dhaka, Dhaka, Bangladesh
  • 2 Bangabandhu Sheikh Mujibur Rahman Maritime University, Dhaka, Dhaka, Bangladesh
  • 3 Comilla University, Comilla, Bangladesh
  • 4 Noakhali Science and Technology University, Noakhali, Bangladesh
  • 5 ASA University Bangladesh, Dhaka, Dhaka, Bangladesh
  • 6 University of Asia Pacific, Dhaka, Dhaka, Bangladesh
  • 7 COVID-19 Diagnostic Lab, Department of Microbiology, Noakhali Science and Technology University, Noakhali-3814, Bangladesh, sonapur, Bangladesh
  • 8 Bangabandhu Sheikh Mujibur Rahman Science and Technology University, Gopalganj, Bangladesh
  • 9 Royal Institute of Technology, Stockholm, Stockholm, Sweden
  • 10 Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur City, Dhaka, Bangladesh

The final, formatted version of the article will be published soon.

    Background: Dengue virus (DENV) infection, spread by Aedes aegypti mosquitoes, is a significant public health concern in tropical and subtropical regions. Among the four distinct serotypes of DENV (DENV-1 to DENV-4), DENV-2 is associated with the highest number of fatalities worldwide. However, there is no specific treatment available for dengue patients caused by DENV-2. Objective: This study aimed to identify inhibitory phytocompounds in-silico in Vernonia cinerea (V. cinerea), a widely used traditional medicinal plant, for treating DENV-2 associated illnesses. Methods: The chemical structures of 17 compounds from V. cinerea were sourced from the Indian Medicinal Plants, Phytochemistry, and Therapeutics (IMPPAT) database. These compounds underwent geometry optimization, were screened against nonstructural protein 1 (NSP1) of DENV-2, and further validated through molecular dynamics simulations (MDS). Baicalein, an established drug against DENV-2, was used for validation in molecular screening, MDS, and MM-GBSA analyses. Results: Among these compounds, Beta-amyrin, Beta-amyrin acetate, Chrysoeriol, Isoorientin, and Luteolin showed promising potential as inhibitors of the NSP1 of DENV-2, supported by the results of thermodynamic properties, molecular orbitals, electrostatic potentials, spectral data and molecular screening. Besides, these compounds adhered to the Lipinski's "rule of 5", showing no hepatotoxicity/cytotoxicity, with mixed mutagenicity, immunotoxicity, and carcinogenicity. Furthermore, final validation through MDS confirmed their potential, demonstrating stable tendencies with significant inhibitory activities against NSP1 of DENV-2 over the control drug Baicalein. Among the screened compounds, Chrysoeriol emerged as the most promising inhibitor of NSP1 of DENV-2, followed by Luteolin and Isoorientin. Conclusion: Taken together, our results suggest that Chrysoeriol is the best inhibitor of NSP1 of DENV-2, which could be evaluated as a therapeutic agent or a lead compound to treat and manage DENV-2 infections.

    Keywords: DENV-2, Nsp1, V. Cinerea, molecular screening, Molecular Dynamics Simulation

    Received: 16 Jul 2024; Accepted: 03 Oct 2024.

    Copyright: © 2024 Shohel Hossain, Hasnat, Akter, Mim, Tahcin, Hoque, Sutradhar, Alifa, Sium, Hossain, Masuma, Rakib, Islam, Islam, Bhattacharya and Hoque. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence:
    Tofazzal Islam, Bangabandhu Sheikh Mujibur Rahman Science and Technology University, Gopalganj, Bangladesh
    Prosun Bhattacharya, Royal Institute of Technology, Stockholm, 100 44, Stockholm, Sweden
    M. Nazmul Hoque, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur City, 1209, Dhaka, Bangladesh

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.