Case Report: Evolution of KIT D816V-Positive Systemic Mastocytosis to Myeloid Neoplasm With PDGFRA Rearrangement Responsive to Imatinib

Systemic mastocytosis (SM) is a rare neoplasm resulting from extracutaneous infiltration of clonal mast cells (MC). The clinical features of SM are very heterogenous and treatment should be highly individualized. Up to 40% of all SM cases can be associated with another hematological neoplasm, most frequently myeloproliferative neoplasms. Here, we present a patient with indolent SM who subsequently developed a myeloid neoplasm with PDGFRA rearrangement with complete response to low-dose imatinib. The 63-year-old patient presented with eosinophilia and elevated serum tryptase level. Bone marrow analysis revealed aberrant MCs in aggregates co-expressing CD2/CD25 and KIT D816V mutation (0.01%), and the FIP1L1-PDGFRA fusion gene was not identified. In the absence of ‘B’ and ‘C’ findings, we diagnosed an indolent form of SM. For 2 years after the diagnosis, the absolute eosinophil count progressively increased. Bone marrow evaluation showed myeloid hyperplasia and the FIP1L1-PDGFRA fusion gene was detected. Thus, the diagnosis of myeloid neoplasm with PDGFRA rearrangement was established. The patient was treated with imatinib 100 mg daily and rapidly obtained a complete molecular remission. The clinical, biological, and therapeutic aspects of SM might be challenging, especially when another associated hematological disease is diagnosed. Little is known about the underlying molecular and immunological mechanisms that can promote one entity prevailing over the other one. Currently, the preferred concept of SM pathogenesis is a multimutated neoplasm in which KIT mutations represent a “phenotype modifier” toward SM. Our patient showed an evolution from KIT mutated indolent SM to a myeloid neoplasm with PDGFRA rearrangement; when the eosinophilic component expanded, a regression of the MC counterpart was observed. In conclusion, extensive clinical monitoring associated with molecular testing is essential to better define these rare diseases and consequently their prognosis and treatment.

Introduction

Systemic mastocytosis (SM) is a heterogeneous group of neoplasms characterized by abnormal expansion of clonal mast cells (MCs) in the bone marrow (BM) and other extracutaneous organ-systems (1).

According to the World Health Organization (WHO) classification, the diagnosis of SM is established in presence of the major criterion and one minor criterion or at least three minor criteria. The major criterion is fulfilled by the detection of multifocal clusters of MCs (aggregates ≥15) in one or more extracutaneous organs (usually BM), while the minor criteria include aberrant MC expression of CD25 and/or CD2, abnormal morphology of MCs, KIT mutation D816V, and a persistent serum tryptase level ≥20 ng/ml (1, 2).

There are five subtypes of SM: indolent SM (ISM), smoldering SM (SSM), SM with an associated hematological (non-MC lineage) neoplasm (SM-AHN), aggressive SM (ASM), and mast cell leukemia (MCL) (1).

The diagnosis of ISM can be established if <2 B findings and no C findings are detected; SSM is defined by ≥2 ‘B’ findings and no ‘C’ findings. ASM is characterized by one or more C findings, while MCL is defined by MCs ≥20% on marrow smears (1, 2).

There are three types of ‘B’ findings: MC infiltration >30% on bone marrow biopsy and serum total tryptase >200 ng/mL; hepatomegaly with normal liver function, palpable splenomegaly without hypersplenism, and/or lymphadenopathy; signs of dysplasia or myeloproliferation in non-MC lineage. The six ‘C’ findings are cytopenias; hepatomegaly with impairment of liver function, ascites, and/or portal hypertension; palpable splenomegaly with hypersplenism; malabsorption with weight loss due to gastrointestinal MC infiltrates; large osteolytic lesions (1, 2).

The goals of ISM treatment are symptom control, severe anaphylaxis prophylaxis, and osteoporosis treatment, while the advanced forms may require cytoreductive therapy. Historically, cytoreductive agents include interferon-α and cladribine. Allogeneic stem cell transplant could be considered in SM-AHN when the associated hematologic neoplasm has an indication of transplantation and in relapsed/refractory ASM or acute MCL (2). With the advent of the tyrosine kinase inhibitors, many efforts have been made to find a proper inhibitor of SM KIT–driver mutation. Imatinib still plays a role in the treatment of rare SM cases that are KIT D816V-unmutated, while more recently midostaurin has been shown to induce major clinical responses in advanced SM regardless of KIT mutational status (2, 3).

Among the myeloid neoplasms, the WHO classification recognizes the family of the myeloid/lymphoid neoplasms with eosinophilia and rearrangement of PDGFRA, PDGFRB, and FGFR1, or with PCM1-JAK2. These are rare diseases characterized by a fusion gene or a mutation resulting in the expression of aberrant tyrosine kinases. Eosinophilia (≥1.5x10⁹/L) is one of the most common features of these neoplasms. In the subgroup associated with PDGFRA rearrangement, the most common genetic abnormality is the FIP1L1-PDGFRA gene fusion, caused by 4q12 deletion (Figure 1) (1, 4–6). Patients frequently complain of fatigue, pruritus, and symptoms related to eosinophilic infiltrates in different organs; splenomegaly and hepatomegaly are common findings (4–6).

FIGURE 1

Figure 1 Schematic representation of FIP1L1–PDGFRA rearrangement. (A) Normal 4q12 region with sites of deletion in cases with the FIP1L1–PDGFRA fusion. The four green bars denote probes that can be used to detect the deletion by fluorescence in situ hybridization. (B) The consequences of deletion: FIP1L1 usually breaks within an intron, while PDGFRA always breaks within exon 12. To obtain splicing between FIP1L1 and PDGFRA, cryptic splice sites need to be used, because the normal splice site in the exon 12 is removed by the deletion. This cryptic splice site could be located either within exon 12 of PDGFRA (type I fusion) or within the intron of FIP1L1 (type 2 fusion).

The natural history of PDGFRA-rearranged neoplasms has been dramatically altered by imatinib and the dosage of 100 mg daily could be sufficient to elicit a complete molecular response in most of the patients (7–9).

Herein, we report the clinical features and the management of a patient with KIT D816V-positive SM who subsequently developed a myeloid neoplasm with PDGFRA rearrangement with a complete molecular response to low-dose imatinib.

All procedures were in accordance with the ethical standards of the responsible committee on human experimentation (institutional and national) and with the Helsinki Declaration of 1975, as revised in 2013.

Case Report

A 63-year-old Caucasian male patient was referred to hematological investigation because of eosinophilia.

His medical history was unremarkable except for post-infectious glomerulonephritis in childhood and flushing episodes that started one year before the hematological evaluation. No pathological findings were reported at physical examination. Previous blood tests revealed a gradual increase of absolute eosinophils count over two years. Recent laboratory examinations showed white blood count (WBC) 8.2x10⁹/L with absolute eosinophil count 2.2x10⁹/L (27%), serum tryptase level 26 ng/mL (normal level <5 ng/mL), normal serum lactate dehydrogenase (LDH), and normal liver and renal function.

A bone marrow biopsy detected 60% of cellularity, with myeloid hyperplasia, increased eosinophils and reticulin, and the presence of multifocal clusters of spindle-shaped MCs co-expressing CD25 and CD2 (>15 cells). Karyotype analysis was normal. Polymerase chain reaction (PCR) detected the D816V KIT mutation on bone marrow (variant allele frequency – VAF - 0.01%), while the FIP1L1-PDGFRA fusion transcript was absent.

Overall, these findings were consistent with a diagnosis of SM for the presence of the major criterion (BM MCs infiltrates) and 3 minor criteria (aberrant MCs, KIT D816V mutation, tryptase level >20 ng/mL). Abdominal ultrasound showed normal liver and spleen dimensions and an absence of lymphadenopathy. Dual-energy X-ray absorptiometry scan detected osteoporosis (lumbar T score -3.3, lumbar Z-score -2.6, femoral neck T-score -1.5, femoral neck Z-score -0.5).

In the absence of ‘B’ and ‘C’ findings, we concluded with an indolent form of SM. The patient did not receive specific therapy other than osteoporosis treatment.

Two years later the patient complained of a worsening of flushing and a recurrent headache. Blood examinations revealed an increase of WBC (13x10⁹/L) with an absolute eosinophil count of 5.1 x 10⁹/L. Suspecting a myeloid neoplasm with eosinophilia, a new bone marrow evaluation was performed. The histological analysis confirmed myeloid hyperplasia with a marked increase of eosinophils and 3% of MCs in rare aggregates. Aspirate smear revealed 36% of eosinophils and 6% of MCs. No aberrant MCs were detected with flow cytometry. Cytogenetic analysis showed normal male karyotype and a digital PCR was negative for KIT D816V mutation. Real-time PCR performed on peripheral blood detected the FIP1L1-PDGFRA fusion transcript and serum tryptase was 20 ng/ml. Thus, the final diagnosis was myeloid neoplasm with PDGFRA rearrangement.

Imatinib 100 mg daily was started, and after 3 months all symptoms resolved and blood tests showed WBC 5.96x10⁹/L with normal eosinophil count (0.09x10⁹/L).

BM analysis revealed the absence of eosinophils and the presence of rare MCs with normal morphology, corresponding to 4% of cellularity at the aspirate smear. Flow cytometry showed a normal MCs phenotype. FIP1L1-PDGFRA and KIT D816V mutations were negative on BM and peripheral blood.

A subsequent BM analysis, performed after 12 months of imatinib treatment, confirmed complete remission of the myeloid neoplasm, absence of aberrant MCs, and negative FIP1L1-PDGFRA and KIT D816V mutations.

Table 1 and Figure 2 report the main hematological findings at diagnosis of SM, diagnosis of myeloid neoplasm with PDGFRA rearrangement, and after 3, 6, and 12 months of imatinib treatment.

TABLE 1

Table 1 Relevant blood and bone marrow parameters in the main time-points from diagnosis of systemic mastocytosis.

FIGURE 2

Figure 2 (A) (Giemsa, 200x) depicts a hypercellular bone marrow, featuring expansion of the eosinophilic lineage, comprising maturing to fully mature eosinophils, while tryptase stain [(B); 200x] delineates the presence of scattered aggregates of epitheliod to spindled mast cells, featuring at least partial CD25-positivity (inset, 400x). Bone marrow biopsy at 3 months from Imatinib initiation [(C); Giemsa, 200x] shows a reduction of cellularity, eosinophilic compartment, and mast cells [(D); tryptase, 200x], which appear scattered. Restitutio ad integrum of the hematopoiesis is steadily apparent in subsequent biopsies [(E, F); Giemsa, 200x], with only scattered tryptase+ cells [(E, F) insets].

Discussion

The clinical features of SM are very heterogenous, ranging from indolent forms to more aggressive diseases which require cytoreductive therapy (1, 2).

MCs derive from CD34+/CD117+ pluripotent hematopoietic progenitor cells in BM. They are normal residents in mucosal tissues and skin with a key role in IgE-associated disorders and acquired or innate immunity (10). More than 90% of SM patients carried a somatic mutation in different regions of KIT which led to structural alteration of the protein with a constitutive activation of the receptor. The KIT D816V mutation is the most common (11). KIT median VAF strongly correlates with disease activity as represented by serum tryptase level, disease subtype (indolent versus advanced), and survival (12).

Up to 40% of all SM cases are associated with another hematological disease, which rarely can be a myeloid/lymphoid neoplasm with eosinophilia (2, 4).

Myeloid/lymphoid neoplasms with eosinophilia and rearrangements of PDGFRA, PDGFRB, and FGFR1 were recognized as a standalone category in the 2008 WHO classification. Subsequently, PCM1-JAK2 was added to this family as a new provisional entity in the 2016 WHO classification (1). Besides the rare cases of SM associated with a myeloid/lymphoid neoplasm with eosinophilia, peripheral eosinophilia may affect up to 28% of all SM patients (2). A paper from 2007 compared D816V-positive SM and FIP1L1/PDGFRA-positive chronic eosinophilic leukemia (13). The distinguishing features for chronic eosinophilic leukemia included the degree of eosinophilia in relation to the tryptase level, the absence of dense MC aggregates, and pulmonary and cardiac symptoms. The authors concluded that the FIP1L1/PDGFRA gene fusion and D816V-KIT mutation cause different clinical syndromes and a distinction is essential for therapeutic decisions (13).

Herein, we reported a case of indolent KIT D816V-positive SM with eosinophilia at diagnosis, which after two years showed an evolution to myeloid neoplasm with PDGFRA rearrangement.

At disease onset, the clinical scenario was characterized by a moderate increase of eosinophils and serum tryptase. Genetic data revealed KIT D816V mutation, while rearrangements for eosinophilia were not identified. SM and myeloid neoplasms with eosinophilia were considered in the differential diagnosis.

Similar to SM, myeloid neoplasms with eosinophilia and specific rearrangements can show dysplastic eosinophils and spindle-shaped MCs. The MCs can also be CD25 positive, but do not form compact aggregates, express CD2, or carry the KIT D816V mutation (14). Our patient displayed all these characteristics; therefore a diagnosis of SM seemed to be the most likely despite a low KIT VAF.

During the follow-up, the patient complained of a worsening of flushing, headache, and eosinophilia. Detection of the FIP1L1-PDGFRA mutation and absence of diagnostic criteria for SM led us to a diagnosis of myeloid neoplasm with PDGFRA rearrangement.

When the PDGFRA rearrangement was identified the eosinophilic component became predominant either in the peripheral blood and bone marrow; Pardanani et al. described 12 cases of SM and chronic eosinophilic leukemia with FIP1L1-PDGFRA. These patients with eosinophilia were more likely to be males and exhibit a “loose” pattern of MC infiltration in BM trephines; 8 of them were also screened for KIT D816V and all tested negative (15).

A clonal relationship between the MC and the associated hematologic non-MC component has been sought using KIT and other mutations as markers of clonality (13, 14). Various studies conducted in patients with concomitant diagnosis of acute myeloid leukemia and SM demonstrated evidence that neoplastic MC and myeloid leukemic blasts are likely to develop from common hematopoietic progenitors (16, 17). Subsequent studies supported the concept of advanced SM pathogenesis as a multimutated neoplasm, in which KIT D816V mutation represents a “phenotype modifier” of clonal hematopoietic stem cell disorders toward SM (18). These findings challenged the concept that the SM and the associated non-MC-hematological disease arise uniformly from a pre-committed neoplastic progenitor cell harboring a KIT mutation and suggest that this category is highly heterogeneous (18).

Our case corroborates data by Maric and Pardanani (13, 15) who considered eosinophilic disorders and systemic mastocytosis as clinically distinct entities with different therapeutic needs. On a molecular level, further studies of next-generation and single-cell sequencing may be of benefit to clarify whether or not KIT mutation and PDGFRA rearrangement should be considered as different clones.

At the time of identification of the FIPL1-PDGFRA transcript, our patient did not meet the diagnostic criteria for SM: on bone marrow, MCs formed rare aggregates, no cytofluorimetric abnormal markers or KIT D816V mutation were identified, and serum tryptase was 20 ng/ml.

According to the literature, only skin diseases in adult patients with SM could regress, in approximately 10% of the cases, while there is no evidence of spontaneous disappearance of bone marrow findings (19). In our case, the expansion of the eosinophilic component was associated with the regression of the MC counterpart, which could be masked or really disappeared during the two years after the SM diagnosis.

ISM has a nearly normal life expectancy; symptom-directed treatment should be considered in all symptomatic patients. These therapies are directed at MC degranulation symptoms, symptomatic skin disease, and osteopenia/osteoporosis. Cytoreductive therapy could be required for advanced SM; in this patient setting, novel agents with potent inhibitory activity against KIT demonstrated significant clinical benefit and reduction of bone marrow MC burden (2).

Initially, our patient received only symptomatic therapy directed towards osteoporosis treatment. When the myeloid neoplasm with PDGFRA rearrangement was diagnosed, low-dose imatinib was started to avoid organ damage related to eosinophilia.

The durable hematologic and molecular remissions induced by imatinib in FIP1L1-PDGFRA–positive myeloid neoplasms have been corroborated by many studies; generally, 100 mg daily may be sufficient to achieve and maintain a long-term molecular response (7–9).

In our case report, after 3 months from the start of imatinib treatment bone marrow evaluation and peripheral blood tests showed normal findings with complete molecular remission of the FIP1L1-PDGFRA–associated neoplasm. Therapy was well-tolerated, and the patient is still in complete molecular response after 18 months of therapy.

In conclusion, SM is a rare disease with an unpredictable clinical course, especially when another associated hematological disease is diagnosed. Little is known about the underlying molecular and immunological mechanisms that can promote one entity prevailing over the other one. Extensive clinical monitoring associated with molecular testing is essential to better define the disease and consequently its prognosis and treatment.

Patient Perspective

With the diagnosis of SM, the patient seemed very concerned. He struggled to accept that only symptomatic therapy was necessary for his rare medical condition; his concern increased even more once flushing worsened, headache became recurrent, and eosinophilia led to a diagnosis of myeloid neoplasm with PDGFRA rearrangement. The patient’s perspective completely changed when the low dose imatinib was started; the treatment was well-tolerated and a complete molecular response with symptom remission was obtained.

Data Availability Statement

The original contributions presented in the study are included in the article/supplementary material. Further inquiries can be directed to the corresponding author.

Ethics Statement

The studies involving human participants were reviewed and approved by the responsible committee on human experimentation (institutional and national). The patients/participants provided their written informed consent to participate in this study. Written informed consent was obtained from the individual(s) for the publication of any potentially identifiable images or data included in this article.

Author Contributions

MS, GC, LB, and FIG provided the patient data regarding the hematological disease. MS, GC, and FIG wrote the manuscript. CE-V provided patient data for what concerns endocrinological aspects. GAC performed the histological examinations of bone marrow, provided iconographic materials, interpreted these data, and integrated them in the manuscript. SF and SL provided patient data regarding molecular aspects. All authors critically read and approved the final manuscript.

Conflict of Interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Publisher’s Note

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