Skip to main content

ORIGINAL RESEARCH article

Front. Mol. Biosci.

Sec. RNA Networks and Biology

Volume 12 - 2025 | doi: 10.3389/fmolb.2025.1529386

Differential Expression and Correlation Analysis of Global Transcriptome for Obstructive Sleep Apnea Hypopnea Syndrome

Provisionally accepted
Ziyi Chen Ziyi Chen 1Guihua Wang Guihua Wang 2Lichen Song Lichen Song 1Yuanyuan Zhang Yuanyuan Zhang 1Guangming Wang Guangming Wang 1,2*
  • 1 Dali University, Dali, China
  • 2 The First Affiliated Hospital of Dali University, Dali, Yunnan, China

The final, formatted version of the article will be published soon.

    In order to investigate the gene expression patterns and molecular regulatory mechanisms of obstructive sleep apnea hypopnea syndrome (OSAHS), the global transcriptome expression profiles of OSAHS patients and healthy people were analyzed using transcriptome sequencing technology. Differential expression of circular RNA, microRNA, long noncoding RNA, and messenger RNA was investigated between the two groups. To further explore the role of differentially expressed genes in OSAHS, we functionally annotated the differentially expressed genes using enrichment analysis of GO and KEGG pathways. Finally, the ceRNA regulatory network of OSAHS was constructed. And validate the differentially expressed mRNA through qRT-PCR analysis. The results showed that 349 circRNAs,552 lncRNAs,205 miRNAs, 502 mRNAs were differentially expressed in patients with OSAHS compared with the healthy population. Terms such as centrosome, positive regulation of execution phase of apoptosis, oxidoreductase activity, regulation of Th 17 cell differentiation and immune response, neutrophil mediated cytotoxicity were enriched in the GO list, suggesting a potential correlation with OSAHS. Pathway analysis showed that Ferroptosis, Herpes simplex virus 1 infection, Pathways in cancer, Hematopoietic cell lineage and other pathways play an important role in OSAHS. By constructing a ternary network, 2 circRNAs and 4 lncRNAs were screened as ceRNAs to compete with miRNAs in the co-expression network, and associated with OSAHS by regulating the function of mRNAs in the network. By constructing a quaternary network miR-8485 and miR-6089 were found to be the top 2 ranked miRNAs most closely associated with OSAHS.Both qRT-PCR and transcriptome sequencing analysis showed similar trends. This provides more theoretical basis for exploring the complex molecular mechanisms of global transcriptome in the development of OSAHS.

    Keywords: Obstructive sleep apnea hypopnea syndrome, Transcriptome sequencing, gene ontology, pathway analysis, ceRNA

    Received: 16 Nov 2024; Accepted: 18 Mar 2025.

    Copyright: © 2025 Chen, Wang, Song, Zhang and Wang. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence: Guangming Wang, Dali University, Dali, China

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

    Research integrity at Frontiers

    Man ultramarathon runner in the mountains he trains at sunset

    94% of researchers rate our articles as excellent or good

    Learn more about the work of our research integrity team to safeguard the quality of each article we publish.


    Find out more