Frontiers in Microbiomes

Original Research

Published on 11 Nov 2025

Active fungal infections alter the respiratory microbiome profiles of Mayo Clinic Arizona patients

in Host and Microbe Associations

Daniel R. Kollath
Kathrine McAulay
Emily A. Higgins Keppler
Kenta S. Reilly
Kenneth K. Sakata
Bridget M. Barker
Thomas E. Grys

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1699912

420 views

Brief Research Report

Accepted on 10 Nov 2025

From Leaves to Microbes: How Diet and Season Shape the fecal microbiome of captive Coquerel´s Sifakas (Propithecus coquereli)

in Nutrition, Metabolism and the Microbiome

Jonas Schweikhard
Andreas Pauly
Paul Wilhelm Dierkes
Franziska Zoelzer

Frontiers in Microbiomes

Original Research

Accepted on 05 Nov 2025

Identification of microbial communities associated with Phymatotrichopsis omnivora sclerotia in two Texas fields

in Environmental Microbiomes

Maxwell Sturdivant
Sanjay Antony-Babu
Elizabeth Pierson
Thomas Chappell
Thomas Isakeit

Frontiers in Microbiomes

130 views

Brief Research Report

Accepted on 03 Nov 2025

Corrosion inhibition of an aluminum alloy by environmentally derived microbial biofilms

in Environmental Microbiomes

Zachary T Burton
Kaoru Ikuma
Han Liu
Nathan Stumme
Scott Shaw
Steven Harris
Simon Laflamme

Frontiers in Microbiomes

Original Research

Accepted on 27 Oct 2025

Integrated Omics Analysis of PGPR and AMF Effects on Soil Microbiota and Root Metabolites in Isatis indigotica

in Environmental Microbiomes

Shuai Yang
Ting Yuan
Tingting Duan
Huimin Zhu
Xiaoxia Zhang
Haihong Zhang
Junjie Jiang
Jun Yang
Lichuan Hu
Yu Yu

Frontiers in Microbiomes

275 views

Original Research

Published on 17 Oct 2025

The EDEN ISS mobile test facility microbiome changes by cleaning and continued use

in Environmental Microbiomes

Luis Gaiser
Kristina Beblo-Vranesevic
Rob Van Houdt
Jana Fahrion
Louise Gillet de Chalonge
Jess M. Bunchek
Paul Zabel
Daniel Schubert
Petra Rettberg

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1608732

884 views

Original Research

Published on 15 Oct 2025

Analysis of microbiome high-dimensional experimental design data using generalized linear models and ANOVA simultaneous component analysis

in Omics and Bioinformatics for Microbiomes

Fentaw Abegaz
Davar Abedini
Lemeng Dong
Johan A. Westerhuis
Fred van Eeuwijk
Harro Bouwmeester
Age K. Smilde

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1584516

866 views

Original Research

Published on 14 Oct 2025

Interplay between host genetics and gut microbiome composition in the Japanese population

in Host and Microbe Associations

David Ortega-Reyes
Tadashi Takeuchi
Yusuke Ogata
Takuro Iwami
Wataru Suda
Tetsuya Kubota
Naoto Kubota
Takashi Kadowaki
Kohei Tomizuka
Hiroshi Ohno

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1635907

1,607 views

Original Research

Published on 10 Oct 2025

Resistome and microbiome profiling of bovine milk following antimicrobial dry cow therapy: insights from short- and long-read metagenomic sequencing

in Host and Microbe Associations

Leire Urrutia-Angulo
José Luis Lavín
Beatriz Oporto
Gorka Aduriz
Ana Hurtado
Medelin Ocejo

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1672438

870 views

Original Research

Published on 08 Oct 2025

Serial nitrogen-phosphate co-limitation controls the primary productivity in the transitional waters of northern South China Sea and the Pearl River Estuary

in Environmental Microbiomes

Yuanhao Liu
Xunying Zhou
Ruoyu Niu
Rongman Yan
Shuaishuai Xu
Kangli Guo
Jing Guo
Jianchang Tao
Sha Wu
Shengwei Hou

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1655960

844 views

Original Research

Accepted on 06 Oct 2025

Microbial dysbiosis in Melasma through community profiling

in Host and Microbe Associations

Yugandhar Reddy
Chandraprabha Doraiswamy
Deepshikha Singh
Nagalakshmi Surendra
Aparna Damle
Maitreyee Dutta
Savitha Rajkumar
Brian Potterf
Arindam Roy
Bharat Cheviti

Frontiers in Microbiomes

329 views

Original Research

Published on 06 Oct 2025

Implications of cyclophosphamide, methotrexate, and 5-fluorouracil chemotherapy on hippocampal-dependent cognition and gut microbiome

in Host and Microbe Associations

Christa Corley
Chase Swinton
Taylor McElory
Bhavana Sridharan
Justin Thomas
Bailey Cronin
Vijayalakshmi Sridharan
Michael S. Robeson
Antiño R. Allen

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1486757

834 views

Original Research

Published on 26 Sep 2025

Diverse cultivation strategies are necessary to capture microbial diversity in High Arctic lake sediment

in Environmental Microbiomes

Brittany M. Berdy
Claire E. Williams
Maria Sizova
Dawoon Jung
Nil Tandogan
Edgar D. Goluch
Slava Epstein

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1619859

7,061 views

Original Research

Published on 26 Sep 2025

Olivine and dissolved alkalinity trigger different bacterial community shifts in water and oyster gills: insights from a mesocosm experiment

in Environmental Microbiomes

Dominik Antoni
Marco Rump
Gunnar Gerdts

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1659695

1,486 views

Original Research

Published on 18 Sep 2025

Investigating impacts from topsoil stockpile height on soil microbial communities

in Environmental Microbiomes

Ashley Fischer
Jay P. Singh
Jonathan Van Hamme
Eric Bottos
Lauchlan H. Fraser

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1607677

811 views

Original Research

Published on 15 Sep 2025

The co-application of arbuscular mycorrhizal fungus and Trichoderma on anthracnose disease in common vetch

in Host and Microbe Associations

Jia He
Faxi Li
Rongchun Zheng
Meiting Bai
Ping Wang
Tingyu Duan

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1654549

560 views