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ORIGINAL RESEARCH article

Front. Microbiol.
Sec. Microbial Symbioses
Volume 15 - 2024 | doi: 10.3389/fmicb.2024.1443182
This article is part of the Research Topic The Gut-Liver Axis: the Main Role of Microbiome in Liver Diseases View all 12 articles

The signatures and crosstalk of gut microbiome, mycobiome, and metabolites in decompensated cirrhotic patients

Provisionally accepted
Yangjie Li Yangjie Li 1Danping Liu Danping Liu 2Yanglan He Yanglan He 1Zeming Zhang Zeming Zhang 2Ajuan Zeng Ajuan Zeng 1Chenlei Fan Chenlei Fan 1Lingna Lyu Lingna Lyu 1*Zilong He Zilong He 2Huiguo Ding Huiguo Ding 1
  • 1 Beijing Youan Hospital, Capital Medical University, Beijing, China
  • 2 Beihang University, Beijing, Beijing Municipality, China

The final, formatted version of the article will be published soon.

    Numerous studies have confirmed that gut microbiota plays a crucial role in the progression of cirrhosis. However, the contribution of gut fungi in cirrhosis is often overlooked due to the relatively low abundance. In this study, we employed 16S ribosomal RNA sequencing, internal transcribed spacer sequencing, and untargeted metabolomics techniques to investigate the composition and interaction of gut bacteria, fungi, and metabolites in cirrhotic patients. In results, cirrhotic patients exhibited significant differences in the diversity and composition of gut microbiota and their metabolites in cirrhotic patients compared to healthy individuals. Increase in pathogenic microbial genera and a decrease in beneficial microbial genera including bacteria and fungi were observed. Various clinical indexes were closely connected with these increased metabolites, bacteria, fungi. Additionally, endoscopic treatment was found to impact the gut microbiota and metabolites in cirrhotic patients, although it did not significantly alter the gut ecology. Finally, we constructed a cirrhosis diagnostic model based on different features (bacteria, fungi, metabolites, clinical indexes) with an AUC of 0.938. Our findings revealed the characteristics of gut microbial composition and their intricate internal crosstalk in cirrhotic patients, providing cuttingedge explorations of potential roles of gut microbes in cirrhosis.

    Keywords: cirrhosis, gut dysbiosis, Bacteria, Fungi, Metabolome

    Received: 03 Jun 2024; Accepted: 31 Jul 2024.

    Copyright: © 2024 Li, Liu, He, Zhang, Zeng, Fan, Lyu, He and Ding. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence: Lingna Lyu, Beijing Youan Hospital, Capital Medical University, Beijing, China

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.