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ORIGINAL RESEARCH article

Front. Microbiol.
Sec. Microorganisms in Vertebrate Digestive Systems
Volume 15 - 2024 | doi: 10.3389/fmicb.2024.1431367

Mendelian Randomization identifies causal associations between GWASassociated bacteria and their metabolites and rheumatoid arthritis

Provisionally accepted
Donghai Zhou Donghai Zhou 1Wenyue Jiao Wenyue Jiao 2*Weiman Shi Weiman Shi 3*Qiao Wang Qiao Wang 3Muzhi Chen Muzhi Chen 1*
  • 1 Department of Rheumatology, The Second Affiliated Hospital of Zhejiang Chinese Medical University, Hangzhou, China
  • 2 Second Clinical Medical School, Zhejiang Chinese Medical University, Hangzhou, Jiangsu Province, China
  • 3 School of Basic Medicine, Zhejiang Chinese Medicine University, Hangzhou, China

The final, formatted version of the article will be published soon.

    Background: Accumulating evidence suggests that an imbalance of gut microbiota is commonly observed in patients with rheumatoid arthritis (RA). However, it remains unclear whether gut microbiota dysbiosis is a cause or consequence of RA, and the mechanisms by which gut dysbiosis contributes to RA have not been fully understood.This study aimed to investigate the causal relationship between gut microbiota and metabolites with RA.Methods: A two-sample Mendelian randomization analysis was performed to estimate the causality of gut microbiota and metabolites on RA. A genome-wide association study (GWAS) of 211 gut microbiota and 217 metabolites was used as the exposure, whereas RA was treated as the outcome. Inverse variance weighted (IVW) was regarded as the primary approach for calculating causal estimates. MR Egger method, Weighted median method, Simple mode method, and weighted mode method were used for sensitive analysis. Metabolic pathway analysis was performed via the web-based Metaconflict 5.0. Additionally, an animal study was undertaken to evaluate the results inferred by Mendelian randomization.Result: This study indicated that six gut microbiota taxa (RuminococcaceaeUCG013,Veillonellaceae) were estimated to exert a positive impact on RA. Conversely, seven gut microbiota taxa (Oxalobacter, Cyanobacteria, RuminococcaceaeUCG002, LachnospiraceaeUCG010, Christensenellaceae, Oxalobacteraceae, Anaerostipes) were estimated to exert a negative impact on RA. Three metabolites, namely indole-3propionate (IPA), glycine and sphingomyelin (SM 16:1), were found to be linked to lower RA risk, while five metabolites (argininosuccinate, CE 20_4, TAG 58_8, PC 40_6, and LPC 20_4) were linked to higher RA risk. Additionally, four metabolic pathways were identified by metabolic pathway analysis. The collagen-induced arthritis (CIA) rats exhibited a higher relative abundance of Class_Clostridia and a lower abundance of Genus_Lachnospiraceae (p < 0.05) than the healthy controls.This study identified causal associations between specific gut microbiota, metabolites, and RA. These findings support the significant role of gut microbiota and metabolites in RA pathogenesis.

    Keywords: Mendelian randomization, Gut Microbiota, Metabolites, autoimmune disease, Rheumatoid arthritis

    Received: 11 May 2024; Accepted: 15 Aug 2024.

    Copyright: © 2024 Zhou, Jiao, Shi, Wang and Chen. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence:
    Wenyue Jiao, Second Clinical Medical School, Zhejiang Chinese Medical University, Hangzhou, Jiangsu Province, China
    Weiman Shi, School of Basic Medicine, Zhejiang Chinese Medicine University, Hangzhou, China
    Muzhi Chen, Department of Rheumatology, The Second Affiliated Hospital of Zhejiang Chinese Medical University, Hangzhou, China

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.