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ORIGINAL RESEARCH article

Front. Microbiol.
Sec. Microorganisms in Vertebrate Digestive Systems
Volume 15 - 2024 | doi: 10.3389/fmicb.2024.1388740

Identifying faecal microbiota signatures of colorectal cancer in a Vietnamese cohort

Provisionally accepted
  • 1 Hanoi Medical University, Hanoi, Red River Delta, Vietnam
  • 2 108 Hospital, Hanoi, Vietnam
  • 3 University of Science and Technology of Hanoi (USTH), Hanoi, Vietnam
  • 4 Vietnamese - German Center of Excellence in Medical Research, Hanoi, Vietnam
  • 5 Institute of Biotechnology, Vietnam Academy of Science and Technology, Hanoi, Red River Delta, Vietnam

The final, formatted version of the article will be published soon.

    Background: Colorectal cancer (CRC) is among the top three causes of global cancer-mortality. In Vietnam, CRC is the third leading cause of death in women and the fourth cause of cancer-mortality in men. A large number of metagenomic studies have been reported the relationship between altered composition and function of the gut microbiota with CRC, but this relationship in low and middle-income countries including Vietnam (with an estimated population of 100.3 million people in 2023, ranking 16 th largest country by population in the world) is not well explored.: We collected clinical data and faecal samples from 43 CRC patients and 44 healthy control subjects. Total community DNA of microorganisms was extracted from the faecal samples and analyzed for microbiota composition by Illumina Miseq amplicon sequencing targeting the V3-V4 region of the 16S rRNA gene. Results: We identified a significant difference in the overall faecal microbiota composition between CRC patients and healthy controls, and we detected several CRC-associated microbial signatures in faecal samples of Vietnamese patients with CRC which overlapped with signatures from other countries and meta-analyses. Although the CRC in patients with (n = 8) and without (n = 35) type 2 diabetes (T2D) exhibited distinct gut microbiota composition compared with healthy control, increased relative abundance of putatively pathogenic species including Parvimonas micra, Peptostreptococcus stomatis and Prevotella intermedia were consistent biomarkers for CRC. In contrast, several health-associated species were significantly depleted in CRC patients such as Lactobacillus johnsonii and Bifidobacterium longum in CRC/non-T2D patients, Ruminococcus species, Bacteriodes uniformis and Phascolarctobacterium faecium in CRC/non-T2D patients, and Butyricicoccus pullicaecorum in both CRC groups combined.Vietnamese cohort and highlight several gut microbial taxa that may have inhibitory or driver roles in CRC. This and future studies will be enabled the designing of future cancer diagnostics and treatment strategies for CRC targeting the microbiota in Vietnam.

    Keywords: colorectal cancer, Faecal microbiota, Cancer signatures, Vietnamese patients, 16S rRNA amplicon sequencing

    Received: 21 Feb 2024; Accepted: 04 Dec 2024.

    Copyright: © 2024 Thi Tuyet Nhung, Le, Nguyen, Huyen, Quyen, Song, Van Thuan and Tran. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence: Tam Thi Thanh Tran, University of Science and Technology of Hanoi (USTH), Hanoi, Vietnam

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.