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ORIGINAL RESEARCH article
Front. Immunol.
Sec. Cancer Immunity and Immunotherapy
Volume 15 - 2024 |
doi: 10.3389/fimmu.2024.1491910
This article is part of the Research Topic Harnessing Molecular Insights for Enhanced Drug Sensitivity and Immunotherapy in Cancer View all 11 articles
Pan-cancer analysis of Arp2/3 complex subunits: focusing on ARPC1A's role and validating the ARPC1A/c-Myc axis in non-small cell lung cancer
Provisionally accepted- 1 Department of Laboratory Medicine, First Affiliated Hospital of Wenzhou Medical University, Wenzhou, Zhejiang Province, China
- 2 Cixi Institute of Biomedicine, Wenzhou Medical University, Cixi, China
Background: The Arp2/3 complex is a key regulator of tumor metastasis, and targeting its subunits offers potential for anti-metastatic therapy. However, the expression profiles, prognostic relevance, and diagnostic value of its subunits across cancers remain poorly understood. This study aims to investigate the clinical relevance of Arp2/3 complex subunits, particularly ARPC1A, in pan-cancer, and to further analyze the potential biological mechanisms of ARPC1A, as well as its association with immune infiltration and chemotherapy drug sensitivity. Methods: To explore the differential expression of Arp2/3 complex subunits and their clinical relevance across cancers, we analyzed data from TCGA and GTEx databases. The relationship between ARPC1A and immune infiltration, as well as its interactions with functional proteins, was examined using the TCPA and TIMER2.0 databases. Gene Set Enrichment Analysis (GSEA) was performed to identify ARPC1A-associated signaling pathways. Chemotherapy drug sensitivity correlated with ARPC1A expression was assessed using CellMiner, GDSC, and CTRP databases. The effect of ARPC1A on c-Myc expression was validated by quantitative PCR (qPCR) and Western blot. Finally, the biological role of ARPC1A in non-small cell lung cancer (NSCLC) cells was further validated using CCK-8, EdU incorporation, colony formation, and Transwell assays. Results: The Arp2/3 complex subunits, particularly ARPC1A, are frequently overexpressed in a majority of cancers, correlating with poor prognostic outcomes and demonstrating significant diagnostic utility. Copy number variations may play a role in the dysregulation of Arp2/3 complex subunit expression. The small molecule X4.5.dianilinophthalimide has shown promise as a targeted therapeutic agent in a pan-cancer context. Functional predictions indicate that ARPC1A is implicated in oxidative phosphorylation pathways and cell proliferation-related signaling pathways, including those mediated by MYC, with ASNS potentially acting as an upstream regulator. Furthermore, ARPC1A has been implicated in the resistance to chemotherapy drugs, including gefitinib. In vitro experiments corroborate that ARPC1A may enhance malignant phenotypes in non-small cell lung cancer (NSCLC) cells through the regulation of c-Myc expression. Conclusion: Our study offers novel insights into targeting Arp2/3 complex subunits as an anti-cancer strategy and underscores the potential of ARPC1A as a novel biomarker for tumor diagnosis, prognosis, and the prediction of immune therapy responses.
Keywords: ARPC1A, Arp2/3 complex subunits, Pan-cancer analysis, biomarker, Immune infiltration
Received: 05 Sep 2024; Accepted: 27 Dec 2024.
Copyright: © 2024 Zhou, Chen, Chen, Hu, Wang and Wang. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
* Correspondence:
Yuxin Chen, Department of Laboratory Medicine, First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, Zhejiang Province, China
Shuhui Chen, Department of Laboratory Medicine, First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, Zhejiang Province, China
Lijuan Hu, Department of Laboratory Medicine, First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, Zhejiang Province, China
Junjun Wang, Department of Laboratory Medicine, First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, Zhejiang Province, China
Yumin Wang, Department of Laboratory Medicine, First Affiliated Hospital of Wenzhou Medical University, Wenzhou, 325000, Zhejiang Province, China
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