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CASE REPORT article

Front. Genet.
Sec. Human and Medical Genomics
Volume 15 - 2024 | doi: 10.3389/fgene.2024.1459291

Case Report: Rethinking NGS Analysis in Diagnosing Diamond-Blackfan Anemia Syndrome

Provisionally accepted
Panayiota L. Papasavva Panayiota L. Papasavva 1*Konstantinos Kaouranis Konstantinos Kaouranis 2Stefania Byrou Stefania Byrou 3Iacovou Efrosini Iacovou Efrosini 4Marina Kleanthous Marina Kleanthous 3Carsten W. Lederer Carsten W. Lederer 3*Thessalia Papasavva Thessalia Papasavva 3
  • 1 The Cyprus Institute of Neurology and Genetics, Nicosia, Cyprus
  • 2 Apostolos Loukas Medical Centre, Nicosia, Cyprus
  • 3 Department of Molecular Genetics Thalassemia, The Cyprus Institute of Neurology and Genetics, Nicosia, Cyprus
  • 4 Other, Nicosia, Cyprus

The final, formatted version of the article will be published soon.

    Diamond-Blackfan anemia syndrome (DBAS) is a rare inherited bone marrow failure (BMF) syndrome characterized by erythroid aplasia, congenital malformations, and cancer predisposition. With its genetic heterogeneity, variable penetrance and expressivity, DBAS poses significant diagnostic challenges, necessitating advancements in genetic testing for improved accuracy. Here, we present the case of an 18-year-old male with a long-standing macrocytic anemia that remained undiagnosed despite standard whole exome sequencing (WES). Revisiting a family-trio WES analysis with clinical insight led to the identification of a likely pathogenic variant in the Ribosomal Protein S17 (RPS17) gene, previously masked due to analytical challenges and conservative filter settings. This variant, an initiation codon mutation, was confirmed in heterozygosity in both the proband and his mother through Sanger sequencing. Comprehensive imaging studies showed no malformations or organ anomalies in either individual, except for mild esophageal stenosis observed in both. RPS17 mutations, particularly those involving the initiation codon, have previously been linked to the DBAS phenotype, however due to analytical complexities involved in RPS17 sequencing analysis, strong pathogenic associations have not yet been firmly established. Our case warns of potential underdiagnosis of RPS17 variants in DBAS, highlighting the importance of clinical context and interdisciplinary collaboration in interpreting WES data to avoid false-negative results.

    Keywords: Diamond-Blackfan anemia syndrome, whole exome sequencing, next generation sequencing, bone marrow failure syndrome, data analysis, filtering

    Received: 04 Jul 2024; Accepted: 07 Oct 2024.

    Copyright: © 2024 Papasavva, Kaouranis, Byrou, Efrosini, Kleanthous, Lederer and Papasavva. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence:
    Panayiota L. Papasavva, The Cyprus Institute of Neurology and Genetics, Nicosia, Cyprus
    Carsten W. Lederer, Department of Molecular Genetics Thalassemia, The Cyprus Institute of Neurology and Genetics, Nicosia, Cyprus

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