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ORIGINAL RESEARCH article

Front. Genet.
Sec. Human and Medical Genomics
Volume 15 - 2024 | doi: 10.3389/fgene.2024.1372164
This article is part of the Research Topic Genetic Etiology and Management for Infertility and Reproductive Diseases View all 5 articles

Insights into Preeclampsia: A Bioinformatics Approach to Deciphering Genetic and Immune Contributions

Provisionally accepted
Yifen Guo Yifen Guo 1,2*Jianxing Huang Jianxing Huang 3*Yingao Yang Yingao Yang 2Shuyue Ren Shuyue Ren 2*Yan Gu Yan Gu 1*Zhixian Gao Zhixian Gao 2*
  • 1 Second Hospital of Tianjin Medical University, Tianjin, China
  • 2 Tianjin Institute of Environmental and Operational Medicine, Tianjin, China
  • 3 Jinzhou Medical University, Jinzhou, Liaoning Province, China

The final, formatted version of the article will be published soon.

    Preeclampsia (PE) is a global pregnancy concern, characterized by hypertension with an unclear etiology. This study employs Mendelian randomization (MR) and single-cell RNA sequencing (scRNA-seq) to clarify its genetic and molecular roots, offering insights into diagnosis and treatment avenues.We integrated PE-specific genome-wide association study (GWAS) data, expression and protein quantitative trait loci (eQTL and pQTL) data, and single-cell data from peripheral blood mononuclear cells (PBMCs). We identified highly variable genes using single-cell information and employed MR to determine potential causality. We also combined pQTL and GWAS data, discerned genes positively associated with PE through scRNA-seq, and leveraged the Enrichr platform to unearth drug-gene interactions.Our scRNA-seq pinpointed notable cell type distribution variances, especially in T helper cells (Th cells), between PE and control groups. We unveiled 591 highly variable genes and 6 directly PEassociated genes. Although MR revealed correlations with PE risk, pQTL analysis was inconclusive due to data constraints. Using DSigDB, 93 potential therapeutic agents, like Retinoic acid targeting core genes (IFITM3, NINJ1, COTL1, CD69, YWHAZ), emerged as prospective multi-target treatments.Utilizing MR and scRNA-seq, this study underscores significant cellular disparities, particularly in Th cells, and identifies crucial genes related to PE. Despite some limitations, these genes have been revealed in PE's underlying mechanism. Potential therapeutic agents, such as Retinoic acid, suggest promising treatment pathways.

    Keywords: Preeclampsia, Mendelian randomization, single-cell RNA sequencing, expression quantitative trait loci, GWAS 1. Introduction

    Received: 17 Jan 2024; Accepted: 14 Jun 2024.

    Copyright: © 2024 Guo, Huang, Yang, Ren, Gu and Gao. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence:
    Yifen Guo, Second Hospital of Tianjin Medical University, Tianjin, China
    Jianxing Huang, Jinzhou Medical University, Jinzhou, 121001, Liaoning Province, China
    Shuyue Ren, Tianjin Institute of Environmental and Operational Medicine, Tianjin, China
    Yan Gu, Second Hospital of Tianjin Medical University, Tianjin, China
    Zhixian Gao, Tianjin Institute of Environmental and Operational Medicine, Tianjin, China

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