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ORIGINAL RESEARCH article

Front. Genet., 03 June 2021
Sec. Computational Genomics
This article is part of the Research Topic Bioinformatics of Genome Regulation, Volume II View all 18 articles

Schizophrenia Plays a Negative Role in the Pathological Development of Myocardial Infarction at Multiple Biological Levels

  • 1Department of Outpatient, West China Hospital, Sichuan University/West China School of Nursing, Sichuan University, Chengdu, China
  • 2Mental Health Center of West China Hospital, Sichuan University, Chengdu, China
  • 3School of Systems Biology, George Mason University (GMU), Fairfax, VA, United States
  • 4Department of Psychiatry, First Hospital/First Clinical Medical College of Shanxi Medical University, Taiyuan, China
  • 5The Center of Gerontology and Geriatrics, National Clinical Research Center for Geriatrics, West China Hospital, Sichuan University, Chengdu, China

It has shown that schizophrenia (SCZ) is associated with a higher chance of myocardial infarction (MI) and increased mortality. However, the underlying mechanism is largely unknown. Here, we first constructed a literature-based genetic pathway linking SCZ and MI, and then we tested the expression levels of the genes involved in the pathway by a meta-analysis using nine gene expression datasets of MI. In addition, a literature-based data mining process was conducted to explore the connection between SCZ at different levels: small molecules, complex molecules, and functional classes. The genetic pathway revealed nine genes connecting SCZ and MI. Specifically, SCZ activates two promoters of MI (IL6 and CRP) and deactivates seven inhibitors of MI (ADIPOQ, SOD2, TXN, NGF, ADORA1, NOS1, and CTNNB1), suggesting that no protective role of SCZ in MI was detected. Meta-analysis showed that one promoter of MI (CRP) presented no significant increase, and six out of seven genetic inhibitors of MI demonstrated minor to moderately increased expression. Therefore, the elevation of CRP and inhibition of the six inhibitors of MI by SCZ could be critical pathways to promote MI. Nine other regulators of MI were influenced by SCZ, including two gene families (inflammatory cytokine and IL1 family), five small molecules (lipid peroxide, superoxide, ATP, ascorbic acid, melatonin, arachidonic acid), and two complexes (CaM kinase 2 and IL23). Our results suggested that SCZ promotes the development and progression of MI at different levels, including genes, small molecules, complex molecules, and functional classes.

Introduction

Schizophrenia (SCZ) is one of the most chronically disabled mental illnesses (McGrath et al., 2008). The early manifestations of the disease usually appear in middle and late adolescence, and the clinical onset usually begins 2–5 years later. Patients with SCZ pose unique challenges due to affect, cognition, and socio-demographic factors. Myocardial infarction (MI) and afterward heart failure are the significant causes of death and disability in the developed countries, characterized by acute myocardial ischemia derived from coronary artery occlusion, myocardial injury, and even necrosis (Lu et al., 2015; Sakaguchi et al., 2020).

An increasing amount of literature has discussed the strong correlations between mental disorders and increased MI mortality, especially in patients with SCZ (Nielsen et al., 2015). A study using a nationwide inpatient sample examines the outcomes of Acute Myocardial Infarction (AMI) in patients with SCZ. They found that 4,648 out of 1,196,698 discharged with AMI were also diagnosed SCZ, and these patients diagnosed with both SCZ and AMI showed higher in-hospital mortality (Karthik et al., 2012). Risks of AMI were raised nearly twofold in younger people with SCZ (age under 35) (Wu et al., 2015). A study by Nielsen et al. (2015) reported that 75% of SCZ patients developed silent MI, which may be related to the psychiatric diseases covering up cardiovascular diseases (Kugathasan et al., 2018). Thus, some studies indicate that SCZ is a significant risk factor of in-hospital mortality in MI patients (Sohn et al., 2015; Wu et al., 2015). Also, high mortality following incident MI in individuals with SCZ may associate with low access to care (Kurdyak et al., 2012).

Despite the clinical outcomes that support the relationship between MI and SCZ (Karthik et al., 2012; Nielsen et al., 2015), the underlying mechanisms of the promotion effect of SCZ on MI are largely unknown. It has been suggested that the pathogenesis of a disease can be explained through a multiscale interactome network of proteins, drug targets, and biological functions (Ruiz et al., 2021), and the network-based location of each disease module determines its pathological relationship to other diseases (Menche et al., 2015). Here, we studied the potential influence of SCZ on MI at different levels (genes, small molecules, complex molecules, and functional classes), with functional pathways constructed. Moreover, a meta-analysis was conducted using MI expression data to explore the gene expression variation within the SCZ-driven MI-regulating genetic pathway. Results from this study may add new insights into the understanding of the negative roles that SCZ plays in the pathological development of MI, which is critical in the prevention and treatment of MI in SCZ patients.

Materials and Methods

This study is organized as follows. First, we conducted a Natural Language Processing (NLP)-based literature data-mining (Daraselia et al., 2004) to construct a genetic pathway connecting SCZ and MI. Second, we performed a meta-analysis to test the gene expression variations of the pathway genes in MI patients. Lastly, we explored SCZ-driven MI regulators at other levels, including small molecules, functional gene classes, and complex molecules.

Identify SCZ-MI Genetic Pathways

Assisted by Pathway Studio (1version 12.3), we conducted an NLP-based large-scale literature data mining to identify common genes that were downstream targets of SCZ and up-regulators of MI. That is, each gene was identified as influenced by SCZ, and was also regulating MI, forming a SCZ→Gene→MI relationship. For each relationship identified, there were at least three independent supporting references, which were provided in the supplementary material SCZ_MI→Ref4GeneticPathway, including the title, DOI/PMID, and the sentences where the relationship was identified. The process was conducted by using MedScan (Daraselia et al., 2004), an NLP-based literature data-mining tool. The data mining covered over 24 million PubMed abstracts and 3.5 million Elsevier and 3rd part full-text papers. Each relationship/edge was built based on the fact extracted from the literature by NLP technology with at least three supporting references. A manually quality control process was enforced to remove unreliable relationships and relationships with non-specific polarities. Here, unreliable relationships refer to these with unmatched sentences, which were false positives by the NLP technique.

All the entities within the remaining network were tested using a meta-analysis with nine independent MI RNA-expression datasets. The purpose of the meta-analysis was to explore the gene expression patterns of these SCZ-drive genes, which may help to understand the literature-based relationships identified. To note, instead of using reported results from original data-related studies, we used the original data to calculate the expression levels. The process is described as follows.

Selection of Gene Expression Datasets for Meta-Analysis

The MI expression datasets were identified within the GEO database2 (Clough and Barrett, 2016). The search was conducted using the keyword “myocardial infarction” with 12,193 items identified. Among these items, 678 studies with series data were selected. We made an outline of the metadata of the identified datasets and selected a sub-set for the meta-analysis with the following steps and criteria: (1) The dataset was array expression data (296 datasets); (2) The original data and the corresponding format file were downloadable (152 datasets; metadata summary of these datasets were presented in Supplementary data SCZ_MIMI_datasets); (3) The model organism of the study was indicated as “human” or “Homo sapiens” (143 datasets); (4) The study design was MI cases vs. healthy control (9 datasets). For step 4, we manually checked the metadata of the 143 datasets from step 3, and the qualified datasets were included for meta-analysis. The nine datasets that satisfied the above criteria were included in the meta-analysis, as shown in Table 1.

TABLE 1
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Table 1. The nine myocardial infarction expression datasets selected for meta-analysis.

Meta-Analysis Models

For each gene, the meta-analysis estimated the effect size in terms of gene expression log2 fold-change (LFC). Results from using both the random-effects model and fixed-effect model were compared following the statistics estimation used by Borenstein et al. (2010). To determine the heterogeneity of the datasets, between- and within-study variance was calculated and compared. When the total variance (Cochran’s Q statistic) was no bigger than the expected value of the between-study variances (df), the model sets the ISq (percentage of the within- over between-study variance) to zero. In this case, the fixed-effect model, instead of the random-effects model, will be selected for the meta-analysis. The definition of Cochran’s Q statistic, df, and ISq was provided in Eq. (1) to (3) (Borenstein et al., 2010). All analyses were performed using Matlab (R2017a version).

Q = i = 1 k W i T i 2 - ( i = 1 k W i T i ) 2 i = 1 k W i , (1)

Where Ti is the deviation of each study, Wi is the inverse variance of each study, and k is the total number of studies.

d f = k - 1 , (2)

Where k is the total number of studies.

I S q = ( Q - d f ) / Q , (3)

Where Q is the total variance defined by Equation (1), and df is the degree of freedom defined in Equation (2).

Analysis of Influential Factors

To estimate the possible influence of several factors (e.g., study date, country of origin, and sample size) on the gene expression in MI patients, we conducted a multiple linear regression (MLR) analysis and reported the P-values for each of these factors.

Identification of Additional SCZ-Driven MI Regulators

To explore SCZ-driven MI regulators at other levels, we conducted another NLP-based literature data mining assisted by the network building module of Pathway Studio3. The analysis was first performed to identify functional gene class, small molecule, complex molecules, and cells that induced MI’s pathological development, and then these types of entities regulated by SCZ were also identified. The overlapped entities were used to construct SCZ→MI network. To ensure high confidence in the identified relationship, we used the confidence level of three (identified entities were supported by at least three references) to filter the relationships. We presented the identified entities and the corresponding relationships in SCZ_MI→Ref4SMPathway and SCZ_MI→Ref4CellPathway.

Results

SCZ-MI Genetic Pathway

As shown in Figure 1, there were nine genes driven by SCZ that were MI regulators. Specifically, SCZ activates two MI promoters (IL6 and CRP) and deactivates seven MI inhibitors (ADIPOQ, SOD2, TXN, NGF, ADORA1, NOS1, and CTNNB1). These could be the potential pathways where SCZ plays an essential role in the pathological development and progression of MI. Notably, seven out of the nine genes were MI inhibitors, indicating that SCZ is strongly associated with MI’s pathological development more through MI-inhibitors’ deactivation than through its promoters’ activation. SCZ may play more roles in the progression deterioration than in the initiation of MI. For the details of the pathways presented in Figure 1, please refer to SCZ_MI→Ref4GeneticPathway. From this genetic pathway analysis, we identified no “good” effect of SCZ in MI.

FIGURE 1
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Figure 1. Schizophrenia driven genetic regulators of myocardial infarction. Each relationship was supported by three or more references. The network contains four different types of proteins and three different types of relationships (edges). Genes in red represent an increased gene expression level in myocardial infarction, and blue means decreased.

Meta-Analysis Results

We conducted a meta-analysis using nine MI-expression datasets to test the expression variation of the genes involved in SCZ-driven genetic pathways for MI. We presented the major results of the meta-analysis and MLR analysis in Table 2. The detailed results of the meta-analysis were presented in SCZ_MI→Meta-analysis.

TABLE 2
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Table 2. Meta-analysis and Multiple Linear Regression analysis results.

As shown in Table 2, population region (Country) was suggested as a significant influential factor for the expression of almost all the genes tested except CRP and CTNNB1. Patients from different countries usually carry racial and ethnic variations that influence gene expression patterns (Hicks et al., 2013). While the sample size only influences the expression of NGF and TXN (p-value = 3e–16 and 6e–6, respectively), and study age seems to be an influential factor for IL6 alone (p-value = 9e–5). These results suggested the complexity of the disease of MI, which could be influenced by multiple factors.

As shown in Figure 1 and Table 2, only one MI promoter (IL6) was significantly up-regulated in MI patients (LFC = 0.71, p-value = 0.021). The other MI promoter (CRP) presented no significant expression change (LFC = 0.018; p-value = 0.40). Therefore, the activation of CRP could be a required course where SCZ promotes MI’s pathological development.

We identified two inhibitors of MI, which got moderate elevation in their expression levels, including ADIPOQ and SOD2 (LFC = 0.44 and 0.21, respectively; p-value = 0.10 and 0.24, respectively). Therefore, inhibiting these two genes’ activity could be another path that SCZ contributes to the promotion of MI. Most of the other MI inhibitors demonstrated minor elevated expression except CTNNB1 (LFC = −0.069). The increased expressions of all these inhibitors of MI were beneficial in the progression MI. Thus, by deactivating these MI inhibitors, SCZ could worsen the progression of MI.

SCZ-Driven Small Molecule Regulators of MI

To explore the connections between SCZ and MI in other levels, we first identified the small molecules that were downstream targets of SCZ and upstream regulators of MI. Three or more references supported each of these relationships (see SCZ_MIRef4SMPathways). Six small molecules satisfied our data mining criteria and formed the small molecule pathway, as shown in Figure 2. Among these six small molecules, SCZ activates two out of three MI promoters and deactivates all three MI inhibitors. Although SCZ could also deactivate one MI promoter (arachidonic acid), the overall conclusion from the small molecular pathway (Figure 2) is consistent with the genetic pathway (Figure 1)—SCZ plays a more negative than positive role at a small molecular level in the pathological development of MI.

FIGURE 2
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Figure 2. Schizophrenia-driven small molecular regulators of myocardial infarction. Each relationship was supported by three or more references. The network contains two different types of relationships (edges): quantitative change and regulation. The small molecules highlighted in red were the regulators of myocardial infarction driven by schizophrenia to play antagonistic roles in the development and progression of myocardial infarction. The ones in green play antagonistic roles in the development and progression of myocardial infarction.

SCZ Driven Regulators of MI at Gene Family and Complex Level

Besides small molecules, we also identified two gene families (inflammatory cytokine and IL1 family) and two complexes (CaM kinase 2 and IL23) that were promoters of MI and stimulated by SCZ. To note, the gene family and complex pathways shown in Figure 3 support only the negative influence of SCZ on MI without a positive effect identified. For the details of the pathways presented in Figure 3, please refer to SCZ_MI→Ref4FCPathway.

FIGURE 3
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Figure 3. Schizophrenia-driven cells, gene families and complex as regulators of myocardial infarction. Each relationship was supported by three or more references. The network contains two types of relationships (quantitative change and regulation).

Discussion

This study explored the SCZ influenced MI regulators at multiple levels: genetic, gene family, small molecule, and complex. Corresponding pathways were constructed with a meta-analysis to test the gene expression within the genetic pathway in MI patients. The pathway built suggested a negative role of SCZ in MI’s pathological development, which is consistent with previous studies (Karthik et al., 2012; Nielsen et al., 2015). However, different from the clinical research exploring the co-occurrence and common clinical features of two diseases, this study mainly focused on experiment data-based studies to uncover potential mechanisms underlying the clinical association between SCZ and MI.

Firstly, we identified the potential association between SCZ and MI at the genetic level through the connection with nine common genes (Figure 1). Most of the pathways presented in Figure 1 pointed to a negative role of SCZ in the pathological development of MI. For example, the interleukin-6 (IL-6) serum concentrations of SCZ patients was confirmed by multiple studies to get significantly elevated (El Kissi et al., 2015), which was shown to be associated with clinical progression of unstable angina and increased risk of MI (Deten et al., 2003; Gori et al., 2006). Our meta-analysis result confirmed that elevated IL-6 expressions in patients with MI (LFC = 0.71, p-value = 0.021). Therefore, the SCZ-IL6-MI could be one of the pathological paths where SCZ promotes MI.

The meta-analysis also showed that the expression of CRP, a promoter of MI, was not significantly elevated in the nine MI-datasets employed in the meta-analysis (Table 2). However, in chronic SCZ patients, the expression levels of CRP could be significantly increased (Meyer et al., 2009), which has been shown to play an essential role in the development of heart failure after MI (Al Aseri et al., 2019). Therefore, the SCZ-CRP-MI pathway could be an essential mechanism explaining the promotion role of SCZ in the progression of MI. Besides the effect of SCZ on the MI promoters, most of the MI inhibitors demonstrated increased expression in MI (LFC > 0), which indicates that SCZ may play more roles in the progression deterioration than in the initiation of MI.

However, we noted that the early stage of SCZ could play some protective role in MI progression through the up-regulation of TXN (an MI inhibitor) (Figure 1). The overexpression of TXN has been suggested as a therapeutical target for MI (Sag et al., 2014; Yang et al., 2016). In the early stage of SCZ, TXN expression could be elevated (Zhang et al., 2009), while in chronic SCZ patients, TXN was shown to be down-regulated, which inverses the role of SCZ back to negative in the progression of MI (Aydın et al., 2018).

ADORA1 forms an oligomeric structure with P2RY1 (Yoshioka et al., 2001) to mediate purine signaling. This activation triggers two different Ca+2 release pathways through Calmodulin Kinase 2 (CamKII) and inositol triphosphate (Paredes-Gamero et al., 2006). The release of calcium ions is essential for heart muscle contractions and electrical signal formation. Therefore, an expression increase in ADORA1 might disrupt the intensity of electrical signals generated by heart and muscle tissues. Increased IL-6 expression could be tied to increased release of calcium ions and inositol triphosphate, which causes a positive feedback loop (Bustamante et al., 2014).

Perhaps the most important finding is related to the formation of adherens and gap junction interactions after expression changes of the identified molecules. Deactivation of the beta-catenin transactivating complex is crucial for structural changes in heart muscle formation and maintenance. ADIPOQ, NOS1, TXN, CTNNB1, and CRP play an essential role in the beta-catenin transactivating complex’s deactivation. Beta-catenin is localized at the fascia adherens junction, where it is part of the N-cadherin– actin complex. Over and underexpression of CTNNB1 (beta-catenin) is tied to cardiomyopathies due to structural changes in heart muscle (Sheikh et al., 2009). Beta-catenin is crucial in cell differentiation in the brain as well, and an abnormal Wnt gene expression and plasma protein levels are proven to be related to SCZ in the earlier studies (Hoseth et al., 2018).

We also identified six SCZ-driven small molecules that influence MI’s advance, as shown in Figure 2. Different from the genetic pathway, we also identified one potential “good” pathway (SCZ→arachidonic acid→MI) where SCZ plays a protective role in MI development. It has been shown that arachidonic acid levels are reduced in post mortem and peripheral red blood cell membranes in SCZ (Berger et al., 2016), while the 5-lipoxygenase derivatives of arachidonic acid have been shown to play an important pathogenic role during MI (Lisovyy et al., 2009). However, the regulation of other MI inhibitors and promoters (Figure 2) suggested that SCZ plays a more negative than positive role at the small molecular (compound) level in the pathological development and progression of MI, which is consistent with that of the genetic pathway presented in Figure 1. For instance, SCZ has been shown to reduce the secretion of melatonin, which was implicated as a protector for the cardiac microvascular ischemia to improve the therapeutic outcomes of MI (Zhou et al., 2018; Saberi et al., 2019). More details of the pathway presented in Figure 2 can be found in SCZ_MI→Ref4SMPathway.

Moreover, our study also uncovered four MI promoters (Figure 3), including two SCZ-driven gene families and two complexes. Notably, plasma concentrations of the Interleukin-1 family (IL-1 family) were found significantly increased in SCZ patients (Sirota et al., 2003), which may characteristically modify the process of coronary artery disease associated with Chlamydia pneumonia infection, leading to the development of MI (Momiyama et al., 2001). The expression of calmodulin kinase II (CaM kinase II) was also elevated in the tissues of patients with SCZ (Lee et al., 2010). It has been suggested that CaM kinase II inhibition could improve ventricular functions and restores normal Ca2+ homeostasis after MI (Hund et al., 2008; Fu et al., 2013), while the overexpression of CaM kinase II causes dilated cardiomyopathy and ventricular dysfunction associated with abnormal Ca2+ handling (Hund et al., 2008). Therefore, the pathways presented in Figure 3 may add new insights into the understanding of the negative role of SCZ in MI development.

This study has several limitations that need to be addressed in future work. First, the identification of the SCZ driven MI-regulators was filtered to have support by at least three references. While this decreased the identified entities’ false-positive ratio, some vital information might be lost between SCZ and MI connection, which needs further consideration. Second, the pathways and relations were constructed based on previous studies that were conducted in different backgrounds. Biology experiments are needed to validate any of the relationships identified in this study. Third, the sample size of the MI datasets employed in this study presented significant variance, which influenced the meta-analysis results. Forth, the relationships identified in this study were mainly quantitative changes at the gene/protein expression level. Other types of relation (e.g., genetic change by GWAS study) may add new insights into the understanding of the SCZ-MI relationship. Fifth, due to the limitation of the NLP technique employed in this study, we did not separate different study types (e.g., human, animal, or cell line) when building the pathway given in Figures 1–3.

Conclusion

We identified 19 SCZ-driven MI-regulators at different biological levels, and SCZ exerts an overall negative influence on MI through the regulation of most of them (18 out of 19). Our results indicated the complexity of the connection between SCZ and MI and may add new insights into the understanding of the negative role that SCZ plays in the pathology of MI.

Data Availability Statement

Publicly available datasets were analyzed in this study. This data can be found here: https://www.ncbi.nlm.nih.gov/geo/.

Author Contributions

XY, YC, and YL developed the study design, analyzed the data, and wrote the original manuscript. All authors read and approved the final manuscript.

Funding

The study was supported Key R&D Project, Department of Science and Technology of Sichuan Province (20ZDYF2800 and 2020YFG0086), National Natural Science Foundation of China (81501197), Research Project on Healthcare in Sichuan Province (Chuanganyan ZH2019-101), and Special Fund Project for Science and Technology Cooperation of Sichuan University and Zigong City, Sichuan Province (2019CDZG-25).

Conflict of Interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Footnotes

  1. ^ www.pathwaystudio.com
  2. ^ https://www.ncbi.nlm.nih.gov/geo/
  3. ^ https://supportcontent.elsevier.com/Support%20Hub/Pathway%20Studio/Network%20Builder%20basic%20_Interactive%20NB%20v114.pdf

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Keywords: schizophrenia, myocardial infarction, genetic pathway, regression analysis, meta-analysis

Citation: Yang X, Chen Y, Wang H, Fu X, Kural KC, Cao H and Li Y (2021) Schizophrenia Plays a Negative Role in the Pathological Development of Myocardial Infarction at Multiple Biological Levels. Front. Genet. 12:607690. doi: 10.3389/fgene.2021.607690

Received: 17 September 2020; Accepted: 06 May 2021;
Published: 03 June 2021.

Edited by:

Anastasia Anashkina, Engelhardt Institute of Molecular Biology, Russian Academy of Sciences (RAS), Russia

Reviewed by:

Yuqi Zhao, Jackson Laboratory, United States
Elvira Galieva, Novosibirsk State University, Russia
Yundai Chen, Department of Cardiology, Chinese PLA General Hospital, China

Copyright © 2021 Yang, Chen, Wang, Fu, Kural, Cao and Li. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

*Correspondence: Ying Li, yingli@scu.edu.cn

These authors have contributed equally to this work

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