Frontiers in Epigenetics and Epigenomics

Original Research

Published on 25 Jul 2024

Benchmark of the Oxford Nanopore, EM-seq, and HumanMethylationEPIC BeadChip for the detection of the 5mC sites in cancer and normal samples

in Epigenomic Tools

Kseniia A. Deinichenko
Valentina G. Vynogradskaya
Pavel A. Grebnev
Valeriya M. Mikova
Dmitriy O. Bobylev
Abusaid M. Shaymardanov
Alexey A. Ivashechkin
Marina V. Erokhina
Alexandra I. Akinshina
Anna V. Semyanihina

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2024.1362926

2,449 views

Review

Published on 19 Jul 2024

Advancements in the clinical application of gene methylation for early cancer detection

in Chromatin Epigenomics

Xin Xu
Yanru Guo
Mulin Liu
Yunxiang Hu
Shijun Li

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2024.1430294

1,700 views

Original Research

Published on 15 Jul 2024

Transcription factor network dynamics during the commitment to oncogene-induced senescence

in Chromatin Epigenomics

Themistoklis Vasilopoulos
Ricardo Iván Martínez-Zamudio

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2024.1423454

1,118 views

Mini Review

Published on 16 May 2024

PIF transcription factors-versatile plant epigenome landscapers

in Chromatin Epigenomics

Moonia Ammari
Kashif Maseh
Mark Zander

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2024.1404958

1,002 views
1 citation

Original Research

Published on 07 May 2024

Enhanced glucose metabolism in Tet-deficient mouse embryonic stem cells

in Epigenetics and Metabolism

Yuhan Yang
Maryn Cavalier
Ashley Suris
Kevin Chen
Claire An
Jingyuan Fan
Logan Rivera
Shaohai Fang
Lei Guo
Yubin Zhou

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2024.1245823

708 views
1 citation

Mini Review

Published on 26 Apr 2024

Micronutrient regulation of the DNA methylome

in Epigenetics and Metabolism

Tiffany Leesang
Peter Lyon
Joey Pinzone
Luisa Cimmino

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2024.1409355

1,019 views

Original Research

Published on 17 Jan 2024

Two pioneers of epigenetics: their different paths to chromatin research and DNA methylation, and general reflections on epigenetics

in Chromatin Epigenomics

Ute Deichmann

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1334556

1,529 views

Review

Published on 04 Jan 2024

SWI/SNF chromatin remodelers in prostate cancer progression

in Chromatin Epigenomics

Sandra C. Ordonez-Rubiano
Brayden P. Strohmier
Surbhi Sood
Emily C. Dykhuizen

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1337345

1,636 views
1 citation

Original Research

Published on 23 Nov 2023

Enhancing sensitivity and versatility of Tn5-based single cell omics

in Chromatin Epigenomics

Isabelle Seufert
Pooja Sant
Katharina Bauer
Afzal P. Syed
Karsten Rippe
Jan-Philipp Mallm

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1245879

2,870 views
2 citations

Mini Review

Published on 21 Aug 2023

Beyond genetics: can micro and nanoplastics induce epigenetic and gene-expression modifications?

in Plant Epigenetics

Anna M. G. Poma
Patrizia Morciano
Massimo Aloisi

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1241583

5,336 views
8 citations

Review

Published on 04 Aug 2023

Protein arginine methylation in transcription and epigenetic regulation

in Chromatin Epigenomics

Hoang Quoc Hai Pham
Xiaoqun Tao
Yanzhong Yang

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1245832

2,611 views
2 citations

Original Research

Published on 31 Jul 2023

Generation of site-specific ubiquitinated histones through chemical ligation to probe the specificities of histone deubiquitinases

in Chromatin Epigenomics

Nouf Omar AlAfaleq
Yun-Seok Choi
Boyko S. Atanassov
Robert E. Cohen
Tingting Yao

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1238154

1,041 views

Mini Review

Published on 23 May 2023

Triggers and mediators of epigenetic remodeling in plants

in Plant Epigenetics

Luca Comai

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1188733

941 views

Original Research

Published on 05 May 2023

Targeted RNAi screen identifies transcriptional mechanisms that prevent premature degeneration of adult photoreceptors

in Chromatin Epigenomics

Spencer E. Escobedo
Sarah E. McGovern
Juan P. Jauregui-Lozano
Sarah C. Stanhope
Paul Anik
Kratika Singhal
Ryan DeBernardis
Vikki M. Weake

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1187980

1,848 views

Perspective

Published on 05 May 2023

Grand challenge in chromatin epigenomics: everything, everywhere, all at once

in Chromatin Epigenomics

Sharon Y. R. Dent

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1195690

1,956 views
2 citations

Perspective

Published on 20 Mar 2023

The epigenetic landscape: An evolving concept

in Chromatin Epigenomics

Steven Henikoff

Frontiers in Epigenetics and Epigenomics

doi 10.3389/freae.2023.1176449

9,304 views
4 citations

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Articles

Benchmark of the Oxford Nanopore, EM-seq, and HumanMethylationEPIC BeadChip for the detection of the 5mC sites in cancer and normal samples

Advancements in the clinical application of gene methylation for early cancer detection

Transcription factor network dynamics during the commitment to oncogene-induced senescence

PIF transcription factors-versatile plant epigenome landscapers

Enhanced glucose metabolism in Tet-deficient mouse embryonic stem cells

Micronutrient regulation of the DNA methylome

Two pioneers of epigenetics: their different paths to chromatin research and DNA methylation, and general reflections on epigenetics

SWI/SNF chromatin remodelers in prostate cancer progression

Enhancing sensitivity and versatility of Tn5-based single cell omics

Beyond genetics: can micro and nanoplastics induce epigenetic and gene-expression modifications?

Protein arginine methylation in transcription and epigenetic regulation

Generation of site-specific ubiquitinated histones through chemical ligation to probe the specificities of histone deubiquitinases

Triggers and mediators of epigenetic remodeling in plants

Targeted RNAi screen identifies transcriptional mechanisms that prevent premature degeneration of adult photoreceptors

Grand challenge in chromatin epigenomics: everything, everywhere, all at once

The epigenetic landscape: An evolving concept