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ORIGINAL RESEARCH article

Front. Endocrinol.
Sec. Systems Endocrinology
Volume 15 - 2024 | doi: 10.3389/fendo.2024.1436360
This article is part of the Research Topic Regulation and Mechanism of Plant Metabolites on Hyperuricemia View all 3 articles

Potential candidates from a functional food Zanthoxyli Pericarpium (Sichuan pepper) for the management of hyperuricemia: high-through virtual screening, network pharmacology and dynamics simulations

Provisionally accepted
meilin chen meilin chen 1Xiaomei Chen Xiaomei Chen 1*Qing-hong Chen Qing-hong Chen 1Chenyang Chu Chenyang Chu 1*Shuxuan Yang Shuxuan Yang 1Chuanghai Wu Chuanghai Wu 1Yanting You Yanting You 1*Andrew Hung Andrew Hung 2Angela Wei Hong Yang Angela Wei Hong Yang 3Xiaomin Sun Xiaomin Sun 1*Lin Zhou Lin Zhou 4*Xiaoshan Zhao Xiaoshan Zhao 1,4*Hong Li Hong Li 1,2*Yanyan Liu Yanyan Liu 1*
  • 1 School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, China
  • 2 School of Science, College of Science, Engineering and Health, RMIT University, Melbourne, Victoria, Australia
  • 3 School of Health and Biomedical Sciences, RMIT University, Melbourne, Australia
  • 4 Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong Province, China

The final, formatted version of the article will be published soon.

    Introduction: Hyperuricemia (HUA) is a metabolic syndrome caused by purine metabolism disorders. Zanthoxyli Pericarpium (ZP) is a medicinal and food homologous plant, and its ripe peel is used to treat diseases and as a spice for cooking. Some studies have shown that ZP can inhibit the formation of xanthine oxidase and reduce the production of uric acid.Methods: Through network pharmacology, ZP's potential targets and mechanisms for HUA treatment were identified. Databases like TCMSP, UniProt, and Swiss Target Prediction were utilized for ZP's active ingredients and targets. HUA-related targets were filtered using GeneCards, Drugbank, and Open Targets. Core targets for ZP's HUA treatment were mapped in a PPI network and analyzed with Cytoscape. GO and KEGG pathway enrichments were conducted on intersected targets via DAVID. Molecular docking and virtual screening were performed to find optimal binding pockets, and ADMET screening assessed compound safety. Molecular dynamics simulations confirmed compound stability in binding sites.We identified 81 ZP active ingredient targets, 140 HUA-related targets, and 6 drug targets, with xanthine dehydrogenase (XDH) as the top core target. Molecular docking revealed ZP's active ingredients had strong binding to XDH. Virtual screening via Portein plus identified 48 compounds near the optimal binding pocket, with 2'-methylacetophenone, ledol, beta-sitosterol, and ethyl geranate as the most promising. Molecular dynamics simulations confirmed binding stability, suggesting ZP's potential in HUA prevention and the need for further experimental validation.Our study provides foundations for exploring the mechanism of the lowering of uric acid by ZP and developing new products of ZP. The role of ZP in the diet may provide a new dietary strategy for the prevention of HUA, and more experimental studies are needed to confirm our results in the future.

    Keywords: Hyperuricemia, Zanthoxylum bungeanum, complementary and alternative medicine, molecular docking, Molecular Dynamics Simulation, medicine and food homologous plant

    Received: 21 May 2024; Accepted: 22 Nov 2024.

    Copyright: © 2024 chen, Chen, Chen, Chu, Yang, Wu, You, Hung, Yang, Sun, Zhou, Zhao, Li and Liu. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence:
    Xiaomei Chen, School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, China
    Chenyang Chu, School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, China
    Yanting You, School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, China
    Xiaomin Sun, School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, China
    Lin Zhou, Nanfang Hospital, Southern Medical University, Guangzhou, 510515, Guangdong Province, China
    Xiaoshan Zhao, School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, China
    Hong Li, School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, China
    Yanyan Liu, School of Traditional Chinese Medicine, Southern Medical University, Guangzhou, China

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.