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ORIGINAL RESEARCH article

Front. Chem.

Sec. Theoretical and Computational Chemistry

Volume 13 - 2025 | doi: 10.3389/fchem.2025.1549441

This article is part of the Research Topic Exploration of the Role of Heme Proteins in Biology with Experimental and Computational Methods View all 5 articles

Cytochrome 'Nanowires' are Physically Limited to Sub-Picoamp Currents that Suffice for Cellular Respiration

Provisionally accepted
  • Baylor University, Waco, United States

The final, formatted version of the article will be published soon.

    Mineral-respiring microorganisms from hydrothermal vents to terrestrial soils express filaments that electrically connect intracellular respiration to extracellular geochemistry. Filaments dubbed "cytochrome nanowires" (CNs) have been resolved by CryoEM, but whether they are the twodecades-long sought-after physiological 'nanowires' remains unproven. To assess their functional competence, we analyzed biological redox conduction in all CNs by computing driving forces in the presence of redox anti-cooperativities, reorganization energies with electronic polarizability, and Marcus rates for diffusive and protein-limited flux models. The chain of heme cofactors in any CN must be densely packed to realize weak (≤0.01 eV) electronic coupling for electron transfer, as evidenced by a single Soret band produced from coincidental absorptions on multiple hemes. Dense packing, in turn, has three consequences: (1) limited driving forces (≤|0.3| eV) due to shared electrostatic microenvironments, (2) strong (≤0.12 eV) redox anti-cooperativities that would accentuate the free energy landscape if the linear heme arrangement did not dictate a contrathermodynamic oxidation order, and (3) an entropic penalty that is offset by thioether 'tethers' of the hemes to the protein backbone. These linkages physically necessitate the rate-throttling T-stacked motif (10-fold slower than the other highly conserved slip-stacked motif). If the sequence of slip-and T-stacked hemes in the CNs had the fastest known nanosecond rates at every step, a micron-long filament would carry a diffusive 0.02 pA current at a physiological 0.1 V, or a protein-limited current of 0.2 pA. Actual CNs have sub-optimal (≤10 2 -fold lower), but sufficient conductivities for cellular respiration, with at most thousands of filaments needed for total cellular metabolic flux. Reported conductivities once used to argue for metallic-like pili against the cytochrome hypothesis and now attributed to CNs remain inconsistent by 10 2 -10 5 -fold with the physical constraints on biological redox conduction through multiheme architectures.

    Keywords: BioDC, multiheme, cytochrome, redox, conductivity, nanowire, Geobacter, polarizability

    Received: 21 Dec 2024; Accepted: 12 Feb 2025.

    Copyright: © 2025 Guberman-Pfeffer and Herron. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence: Matthew J. Guberman-Pfeffer, Baylor University, Waco, United States

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

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