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ORIGINAL RESEARCH article

Front. Cell. Infect. Microbiol.
Sec. Clinical Microbiology
Volume 14 - 2024 | doi: 10.3389/fcimb.2024.1434754

Changes and functional prediction of ear canal flora in chronic bacterial otitis externa

Provisionally accepted
Tingting Duan Tingting Duan 1Zhiqun Li Zhiqun Li 1Xiaoyong Han Xiaoyong Han 2Qichao Hong Qichao Hong 3Yunan Yang Yunan Yang 1Jingren Yan Jingren Yan 1*Chengliang Xing Chengliang Xing 1*
  • 1 First Affiliated Hospital of Hainan Medical University, Haikou, China
  • 2 The Traditional Chinese Medicine Hospital of Linping District, Hangzhou, China
  • 3 Department of Otorhinolaryngology Head and Neck Surgery, Hainan General Hospital, Haikou, Hainan Province, China

The final, formatted version of the article will be published soon.

    Objective: To investigate ear canal microflora's structure, composition and function in patients with chronic bacterial otitis externa.A case-control study design method was used to collect the ear canal secretions from 14 patients with chronic bacterial external otitis (CB group) and 14 healthy controls (H group) treated in the Department of Otolaryngology and Head and Neck Surgery in the First Affiliated Hospital of Hainan Medical University. 16S rRNA high-throughput sequencing technology was used to sequence the ear canal microflora's V3 ~V4 region gene amplification products in the participating population. The α diversity of ear canal microflora in 2 groups was analyzed. Based on the weighted Unifrac distance, principal coordinate analysis was performed to compare the β diversity of ear tract microflora between the two groups. The differences in ear microflora at phylum and genus levels were analyzed. PICRUSt2 function prediction and BugBase phenotype prediction were also performed.Results: α diversity analysis showed that the diversity and richness of auricular microflora in t h e CB group were significantly lower than those in t h e H group. β diversity analysis showed that there were some differences between the two groups. At the phylum level, the relative abundance of Bdellovibrionota, Campylobacterota, and WPS-2 in the microbiota of patients in the CB group was significantly lower than that in the H group, and the differences were statistically significant.At the 2 genus level, the relative abundance of Pseudomonas, Acinetobacter, Pelomonas, Sphingomonas, Bradyrhizobium, Brevundimonas, Enhydrobacter, Actinomyces, Paracoccus and Chryseobacterium in the ear canal of Group H is significantly higher than that of Group CB. Functional prediction of PICRUSt2 suggests that amino acid biosynthesis and bacterial microbiota may be related. In BugBase phenotypic prediction, the contribution of aerobic phenotype in group CB was significantly lower than that in group H.The diversity and abundance of the ear canal flora of patients with chronic bacterial otitis externa were significantly lower than those of the healthy population, and their bacterial colony structure was significantly altered. Dysbiosis of the ear canal flora may be an important cause of chronic bacterial otitis externa.

    Keywords: Chronic otitis externa, microbiome, Bacteria, OTU, function prediction

    Received: 18 May 2024; Accepted: 24 Sep 2024.

    Copyright: © 2024 Duan, Li, Han, Hong, Yang, Yan and Xing. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence:
    Jingren Yan, First Affiliated Hospital of Hainan Medical University, Haikou, China
    Chengliang Xing, First Affiliated Hospital of Hainan Medical University, Haikou, China

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