AUTHOR=Sun Limin , Zhang Shuguang , Yang Ziyue , Yang Fei , Wang Zhenhua , Li Hongqiang , Li Yaoguang , Sun Tongwen 

TITLE=Clinical Application and Influencing Factor Analysis of Metagenomic Next-Generation Sequencing (mNGS) in ICU Patients With Sepsis

JOURNAL=Frontiers in Cellular and Infection Microbiology

VOLUME=12

YEAR=2022

URL=https://www.frontiersin.org/journals/cellular-and-infection-microbiology/articles/10.3389/fcimb.2022.905132

DOI=10.3389/fcimb.2022.905132

ISSN=2235-2988

ABSTRACT=<sec><title>Objective</title><p>To analyze the clinical application and related influencing factors of metagenomic next-generation sequencing (mNGS) in patients with sepsis in intensive care unit (ICU).</p></sec><sec><title>Methods</title><p>The study included 124 patients with severe sepsis admitted to the ICU in the First Affiliated Hospital of Zhengzhou University from June 2020 to September 2021. Two experienced clinicians took blood mNGS and routine blood cultures of patients meeting the sepsis diagnostic criteria within 24 hours after sepsis was considered, and collection the general clinical data.</p></sec><sec><title>Results</title><p>mNGS positive rate was higher than traditional blood culture (67.74% vs. 19.35%). APACHE II score [odds ratio (<italic>OR</italic>)=1.096], immune-related diseases (<italic>OR</italic>=6.544), and hypertension (<italic>OR</italic>=2.819) were considered as positive independent factors for mNGS or culture-positive. The sequence number of microorganisms and pathogen detection (mNGS) type had no effect on prognosis. Age (<italic>OR</italic>=1.016), female (<italic>OR</italic>=5.963), myoglobin (<italic>OR</italic>=1.005), and positive virus result (<italic>OR</italic>=8.531) were independent risk factors of sepsis mortality. Adjusting antibiotics according to mNGS results, there was no statistical difference in the prognosis of patients with sepsis.</p></sec><sec><title>Conclusion</title><p>mNGS has the advantages of rapid and high positive rate in the detection of pathogens in patients with severe sepsis. Patients with high APACHE II score, immune-related diseases, and hypertension are more likely to obtain positive mNGS results. The effect of adjusting antibiotics according to mNGS results on the prognosis of sepsis needs to be further evaluated.</p></sec>