Skip to main content

ORIGINAL RESEARCH article

Front. Bioeng. Biotechnol.
Sec. Synthetic Biology
Volume 12 - 2024 | doi: 10.3389/fbioe.2024.1468974

Biosynthesis of novel non-proteinogenic amino acids β-hydroxyenduracididine and β-methylphenylalanine in Escherichia coli

Provisionally accepted
  • 1 The University of Queensland, Brisbane, Australia
  • 2 Centre of Excellence for Synthetic Biology, Faculty of Science and Engineering, Macquarie University, Sydney, Australia
  • 3 Australian Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, Australia
  • 4 Queensland Metabolomics and Proteomics facility, Brisbane, Australia
  • 5 Institute of Molecular Biosciences, The University of Queensland, Brisbane, Queensland, Australia

The final, formatted version of the article will be published soon.

    Non-proteinogenic amino acids (npAAs) are valuable building blocks for the development of advanced pharmaceuticals and agrochemicals. The surge in interest in their synthesis is primarily due to the potential to enhance and diversify existing bioactive molecules. This can be achieved by altering these bioactive molecules to improve their effectiveness, reducing resistance compared to their natural counterparts or generating molecules with novel functions. Traditional production of npAAs in native hosts requires specialized conditions and complex cultivation media. Furthermore, these compounds are often found in organisms that challenge genetic manipulation. Thus, the recombinant production of these npAAs in a model organism like Escherichia coli paves the way for groundbreaking advancements in synthetic biology. For the first time, we report the synthesis of npAAs β-methylphenylalanine (BmePhe), β-hydroxyenduracididine (BhEnd), and enduracididine (End) from Streptomyces hygroscopicus in E. coli. Through proteomic and metabolomic analyses, we achieved the production of these compounds from two synthetic operons, comprising five heterologous proteins. Interestingly, we discovered that the exogenous addition of pathway precursors to the E. coli system enhanced the yield of BmePhe by 2.5 times, whereas it concurrently attenuated the production of BhEnd and End, signifying a selective precursor-dependent yield enhancement. This study broadens the synthetic biology landscape by expanding the repertoire of amino acids beyond the conventional set of twenty-two standard proteinogenic amino acids. The biosynthesized npAAs, End, BhEnd and BmePhe hold promise for engineering proteins with modified functions, integrating into novel metabolites and/or enhance biologics' stability and activity. Additionally, these amino acids' biological production and subsequent purification present an alternative to traditional chemical synthesis methods, paving a direct pathway for pharmacological evaluation.

    Keywords: Non-proteinogenic amino acids, E. coli, β-Methylphenylalanine, Enduracididine, βhydroxyenduracididine, Streptomyces, heterologous expression

    Received: 22 Jul 2024; Accepted: 13 Sep 2024.

    Copyright: © 2024 Gillane, Daygon, Khalil and Marcellin. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence: Esteban Marcellin, Centre of Excellence for Synthetic Biology, Faculty of Science and Engineering, Macquarie University, Sydney, 2113, Australia

    Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.