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CORRECTION article

Front. Toxicol., 24 August 2023
Sec. Computational Toxicology and Informatics
Volume 5 - 2023 | https://doi.org/10.3389/ftox.2023.1278066
This article is part of the Research Topic Insights in Computational Toxicology and Informatics: 2022 View all 5 articles

Corrigendum: Tox21Enricher-Shiny: an R Shiny application for toxicity functional annotation analysis

This article is a correction to:

  1. Tox21Enricher-Shiny: an R Shiny application for toxicity functional annotation analysis

    1. Read original article
Parker Combs,Parker Combs1,2Jeremy EricksonJeremy Erickson2Jui-Hua HsiehJui-Hua Hsieh2Kai Guo,Kai Guo1,3Sue NolteSue Nolte2Charles SchmittCharles Schmitt2Scott Auerbach Scott Auerbach2*Junguk Hur Junguk Hur1*
  • 1Department of Biomedical Sciences, School of Medicine and Health Sciences, University of North Dakota, Grand Forks, ND, United States
  • 2National Institute of Environmental Health Sciences (NIH), Durham, NC, United States
  • 3Michigan Medicine, University of Michigan Health, Ann Arbor, MI, United States

A Corrigendum on
Tox21Enricher-Shiny: an R Shiny application for toxicity functional annotation analysis

by Combs P, Erickson J, Hsieh J-H, Guo K, Nolte S, Schmitt C, Auerbach S and Hur J (2023). Front. Toxicol. 5:1147608. doi: 10.3389/ftox.2023.1147608

In the published article, the citation for National Center for Advancing Translational Sciences was displayed as “National Center for Advancing Translational Sciences, 2018”. The correct citation is in Introduction, Paragraph 4 and should read:

“Tox21Enricher-Shiny contains annotations from various sources for 8,948 chemicals derived from the Tox21 10K library, which is a set of 10,000 chemicals currently being studied by the National Center for Advancing Translational Sciences (NCATS) (National Center for Advancing Translational Sciences, 2022). The scope of the annotations in the database is limited to data that could be collected from studying these chemicals.”

In the published article, the reference for Hur et al. (2018) was incorrectly omitted. It should be “Hur J., Danes, L., Hsieh, J.-H., McGregor, B., Krout, D., and Auerbach, S. (2018). Tox21 Enricher: Web-based Chemical/Biological Functional Annotation Analysis Tool Based on Tox21 Toxicity Screening Platform. Molecular Informatics 2018 May; 37(5): e1700129. doi: 10.1002/minf.201700129”.

In the published article, the reference for Sushko et al. (2012) was incorrectly omitted. It should be “Sushko, I., Salmina, E., Potemkin, V. A., Poda, G., and Tetko, I. V. (2012). ToxAlerts: a Web server of structural alerts for toxic chemicals and compounds with potential adverse reactions. J Chem Inf Model. 2012 Aug 27; 52(8): 2310-6. doi: 10.1021/ci300245q”.

In the published article, there was an error in the reference for National Center for Advancing Translational Sciences (2022). The corrected reference appears below.

“National Center for Advancing Translational Sciences (2022). About Tox21. Available at: https://ncats.nih.gov/tox21 (Accessed August 14 2023)”.

The authors apologize for these errors and state that they do not change the scientific conclusions of the article in any way. The original article has been updated.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

References

Hur, J., Danes, L., Hsieh, J.-H., McGregor, B., Krout, D., and Auerbach, S. (2018). Tox21 Enricher: web-based chemical/biological functional annotation analysis tool based on Tox21 toxicity screening platform. Mol. Inform. 37 (5), e1700129. doi:10.1002/minf.201700129

PubMed Abstract | CrossRef Full Text | Google Scholar

Sushko, I., Salmina, E., Potemkin, V. A., Poda, G., and Tetko, I. V. (2012). ToxAlerts: a web server of structural alerts for toxic chemicals and compounds with potential adverse reactions. J. Chem. Inf. Model. 52 (8), 2310–2316. doi:10.1021/ci300245q

PubMed Abstract | CrossRef Full Text | Google Scholar

National Center for Advancing Translational Sciences. (2022). About Tox21. Available at: https://ncats.nih.gov/tox21 (Accessed August 14, 2023).

Google Scholar

Keywords: toxicity analysis, Tox21, enrichment analysis, R shiny, web-based application

Citation: Combs P, Erickson J, Hsieh J-H, Guo K, Nolte S, Schmitt C, Auerbach S and Hur J (2023) Corrigendum: Tox21Enricher-Shiny: an R Shiny application for toxicity functional annotation analysis. Front. Toxicol. 5:1278066. doi: 10.3389/ftox.2023.1278066

Received: 15 August 2023; Accepted: 16 August 2023;
Published: 24 August 2023.

Approved by:

Frontiers Editorial Office, Frontiers Media SA, Switzerland

Copyright © 2023 Combs, Erickson, Hsieh, Guo, Nolte, Schmitt, Auerbach and Hur. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

*Correspondence: Scott Auerbach, auerbachs@niehs.nih.gov; Junguk Hur, jung.hur@und.edu

Disclaimer: All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.