- 1Department of Plant Pathology and Weed Research, Agricultural Research Organization (ARO), Rishon LeZion, Israel
- 2Department of Agricultural, Food and Environmental Sciences, Marche Polytechnic University, Ancona, Italy
Editorial on the Research Topic
Highlights from the Botrytis and Sclerotinia 2022 Joint Conference
Botrytis spp. and Sclerotinia spp. are fungal plant pathogens of major agricultural importance. These related fungi, both of the family Sclerotiniaceae, target many economically important crops, and a lot of fungicides are currently employed worldwide in an effort to control them (Williamson et al., 2007; Fillinger and Elad, 2016). Urgent interventions are required to better understand these pathogens and mitigate their effects on crop production. This Research Topic aimed to bring together new biological research and technical innovations concerning these pathogens and their interactions with plants, to ultimately help the development of advanced effective and sustainable control methods.
The international Botrytis conference has been bringing together researchers investigating all aspects of Botrytis biology since 1966. The conference has been held every 2-4 years since 1966, and is the central conference for Botrytis researchers worldwide. In a similar way, the Sclerotinia workshop, held roughly every 3-4 years since 1974, has been dedicated to all aspects of Sclerotinia research.
Prior to the 18th BotrySclero conference, researchers collaborating in both fields had decided to unify the Botrytis and Sclerotinia events, given the similarity of these fungi and their host ranges (De Miccolis Angelini et al., 2022), and the fact that many research groups study both fungi, creating a significant overlap in the attendees of both events. Continuing with this inclusive theme of related fungal phytopathogen species, the upcoming conference to be held in Thessaloniki, Greece, in 2025, will include Monilinia researchers and be dubbed ‘BotryScleroMoni’.
Postponed from 2020 due to COVID-19, the BotrySclero conference, which was also the 18th Botrytis conference and the 17th Sclerotinia workshop, was held in June of 2022 in Avignon, France, after a successful online conference promoting early career scientists in this field was held in 2021. Thus, the excellent organizing committee in practice organized two separate conferences. The online conference constituted a significant contribution to researchers in the field who were not able to meet in person due to COVID-19 restrictions.
During the 2022 conference, which for many of us was the first “real” conference we attended following the COVID-19 pandemic, leading researchers in the Botrytis and Sclerotinia fields presented work categorized in several topics including fungal diversity, host adaptation, and development; -omic methods in Botrytis and Sclerotinia research; ecology and epidemiology of these fungi; host-pathogen interactions, and disease management. Uniquely, this conference continues over the years to bring together individuals engaged in both basic and applied research projects. Thus, basic themes of fungal development, host adaptation and ecological aspects of fungal biology were presented and contemplated by all present, alongside applicable aspects relating to the epidemiology and management of gray mold (caused by Botrytis) and white rot (caused by Sclerotinia), both pre and postharvest, as well as aspects relating to the noble wine production industry, where Botrytis is used as part of the production process, owing to berry dehydration that increases sugar content (Magyar, 2011).
The innovative research presented at the conference can be divided into several themes, including Fungal development and Functional genomics (Fall et al., 2018; Hahn and Scalliet, 2021; Henríquez-Urrutia et al., 2022; Schumacher, 2023); Host adaptation and specificity (Clarkson et al., 2017; Liang and Rollins, 2018; de Vallée et al., 2019; Lacrampe et al., 2021; Mercier et al., 2021; Michael et al., 2021; Silva et al., 2021a; Silva et al., 2021b; You and van Kan, 2021; Anand et al., 2022; Rombach et al.), virulence mechanisms, including mycoviruses (Kamaruzzaman et al., 2019; Fu et al., 2023), bioactive peptides, extracellular vesicles (Souibgui et al., 2021; De Vallée et al., 2023), and secretion (Lyu et al., 2016; Xie et al., 2021); Epidemiology, Ecology, and disease management (Pintye et al., 2015; Nicolaisen et al., 2017; Chen et al., 2018; Fall et al., 2018; Wytinck et al., 2020; Samaras et al., 2021; Romanazzi and Moumni, 2022); and host adaptation, virulence, and disease management aspects related to wine grapes and noble wine (Hegyi et al., 2022; Mundy et al., 2022; Jiang et al., 2023). Notably, the use of cutting edge technologies for both genetic and -omic analyses, and disease detection and management, was evident in the research presented.
In line with these diverse and multi-disciplinary aspects of Botrytis and Sclerotinia research, the Research Topic entitled “Highlights from the Botrytis and Sclerotinia 2022 Joint Conference” includes 6 research works, relating mainly to host pathogen interactions and disease control.
In Rombach et al., the interaction between B. cinerea and its tomato host is examined in the context of the under-investigated response of the fungus to the tomato leaf microstructure, using cutting-edge biomimetics. The authors found that B. cinerea spore distribution differs based on surface microstructure, leading to a structure-based germination response.
Qin et al. examined the possible functionality of plant small RNAs in down-regulating B. cinerea virulence by silencing fungal virulence genes through a cross-kingdom RNAi process, finding that a particular tomato sRNA potentially targeting a fungal virulence gene was actually not responsible for fungal virulence gene down-regulation.
Gupta et al. investigated viral-fungal co-infection using B. cinerea and the agriculturally devastating tobamovirus ToBRFV. Such co-infections are becoming increasingly relevant, especially when several sub-lethal pathogens are present simultaneously, a situation which has been suggested to be exacerbated by climate change. The authors found that tobamovirus-mediated accumulation of salicylic acid increases the plants’ susceptibility to B. cinerea, suggesting that ToBRFV may pose additional risks in agriculture.
In a cautionary work, You et al. investigated the basis of B. cinerea resistance in the wild tomato relative Solanum habrochaites, finding that inoculation methods and media used in laboratory settings can affect disease assay outcomes, with either a low spore density or a high sugar concentration in the inoculum abolishing the potential disease resistance of tomato hosts.
Sofianos et al. addressed another important issue in gray mold management - the ever present risk of emergence of newly fungicide resistant isolates. Characterizing the genetic basis for fungicide resistance in isolates from strawberries, rootstocks, and tomatoes, their work shows that mutations leading to multiple resistance or multidrug resistance are highly prevalent, underscoring the importance of resistance management in different crops.
Finally, Altieri et al. provide a perspective on the efficacy of different commercial biocontrol agents in reducing gray mold in grapevine, as compared with a commercial fungicide. Their wide data analysis confirms that biocontrol efficacy is highly environmentally sensitive, supporting the notion that current research into biocontrol efficacy should focus on environmental interactions.
Overall, these 6 papers demonstrate the varied research the Botrytis and Sclerotinia communities are engaged in, and provide some of the open questions which will likely be addressed in the upcoming conference in 2025.
Author contributions
MB: Conceptualization, Writing – original draft, Writing – review & editing. GR: Conceptualization, Writing – review & editing.
Funding
The author(s) declare that no financial support was received for the research, authorship, and/or publication of this article.
Acknowledgments
The editors wish to thank all contributors to the Research Topic, and the conference organizers and attendees for the well-planned, productive, enriching, and all-around excellent conference.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision.
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References
Anand, G., Gupta, R., Bar, M. (2022). Cytokinin regulates energy utilization in Botrytis cinerea. Microbiol. Spectr. 10, e00280–e00222. doi: 10.1128/spectrum.00280-22
Chen, W., Hambleton, S., Seifert, K. A., Carisse, O., Diarra, M. S., Peters, R. D., et al. (2018). Assessing performance of spore samplers in monitoring aeromycobiota and fungal plant pathogen diversity in Canada. Appl. Environ. Microbiol. 84, e02601–e02617. doi: 10.1128/AEM.02601-17
Clarkson, J. P., Warmington, R. J., Walley, P. G., Denton-Giles, M., Barbetti, M. J., Brodal, G., et al. (2017). Population structure of Sclerotinia subarctica and Sclerotinia sclerotiorum in England, Scotland and Norway. Front. Microbiol. 8. doi: 10.3389/fmicb.2017.00490
De Miccolis Angelini, R. M., Landi, L., Raguseo, C., Pollastro, S., Faretra, F., Romanazzi, G. (2022). Tracking of Diversity and Evolution in the Brown Rot Fungi Monilinia fructicola, Monilinia fructigena, and Monilinia laxa. Front. Microbiol. 13. doi: 10.3389/fmicb.2022.854852
de Vallée, A., Bally, P., Bruel, C., Chandat, L., Choquer, M., Dieryckx, C., et al. (2019). A similar secretome disturbance as a hallmark of non-pathogenic Botrytis cinerea ATMT-mutants? Front. Microbiol. 10. doi: 10.3389/fmicb.2019.02829
De Vallée, A., Dupuy, J.-W., Moriscot, C., Gallet, B., Vanderperre, S., Guignard, G., et al. (2023). Extracellular vesicles of the plant pathogen Botrytis cinerea. J. Fungi (Basel) 9, 495. doi: 10.3390/jof9040495
Fall, M. L., Boyse, J. F., Wang, D., Willbur, J. F., Smith, D. L., Chilvers, M. I. (2018). Case study of an epidemiological approach dissecting historical soybean Sclerotinia stem rot observations and identifying environmental predictors of epidemics and yield loss. Phytopathology 108, 469–478. doi: 10.1094/PHYTO-12-16-0446-R
Fillinger, S., Elad, Y. (2016) Botrytis – the fungus, the pathogen and its management in agricultural systems. Available at: https://books.google.co.il/books/about/Botrytis_the_Fungus_the_Pathogen_and_Its.html?id=1FsNswEACAAJ&redir_esc=y (Accessed February 27, 2018).
Fu, M., Qu, Z., Pierre-Pierre, N., Jiang, D., Souza, F. L., Miklas, P., et al. (2023). Exploring the mycovirus SsHADV-1 as a biocontrol agent of white mold caused by Sclerotinia sclerotiorum. Plant Dis. doi: 10.1094/PDIS-07-23-1458-RE
Hahn, M., Scalliet, G. (2021). One cut to change them all: CRISPR/Cas, a groundbreaking tool for genome editing in Botrytis cinerea and other fungal plant pathogens. Phytopathology 111, 474–477. doi: 10.1094/PHYTO-09-20-0379-PER
Hegyi, Á.I., Otto, M., Geml, J., Hegyi-Kaló, J., Kun, J., Gyenesei, A., et al. (2022). Metatranscriptomic analyses reveal the functional role of Botrytis cinerea in biochemical and textural changes during noble rot of grapevines. J. Fungi (Basel) 8, 378. doi: 10.3390/jof8040378
Henríquez-Urrutia, M., Spanner, R., Olivares-Yánez, C., Seguel-Avello, A., Pérez-Lara, R., Guillén-Alonso, H., et al. (2022). Circadian oscillations in Trichoderma atroviride and the role of core clock components in secondary metabolism, development, and mycoparasitism against the phytopathogen Botrytis cinerea. eLife 11, e71358. doi: 10.7554/eLife.71358
Jiang, L., Dumlao, M. C., Donald, W. A., Steel, C. C., Schmidtke, L. M. (2023). Rapid in-field volatile sampling for detection of Botrytis cinerea infection in wine grapes. Molecules 28, 5227. doi: 10.3390/molecules28135227
Kamaruzzaman, M., He, G., Wu, M., Zhang, J., Yang, L., Chen, W., et al. (2019). A Novel partitivirus in the hypovirulent isolate QT5-19 of the plant pathogenic fungus Botrytis cinerea. Viruses 11, 24. doi: 10.3390/v11010024
Lacrampe, N., Lopez-Lauri, F., Lugan, R., Colombié, S., Olivares, J., Nicot, P. C., et al. (2021). Regulation of sugar metabolism genes in the nitrogen-dependent susceptibility of tomato stems to Botrytis cinerea. Ann. Bot. 127, 143–154. doi: 10.1093/aob/mcaa155
Liang, X., Rollins, J. A. (2018). Mechanisms of broad host range necrotrophic pathogenesis in Sclerotinia sclerotiorum. Phytopathology 108, 1128–1140. doi: 10.1094/PHYTO-06-18-0197-RVW
Lyu, X., Shen, C., Fu, Y., Xie, J., Jiang, D., Li, G., et al. (2016). A small secreted virulence-related protein is essential for the necrotrophic interactions of Sclerotinia sclerotiorum with its host plants. PloS Pathog. 12, e1005435. doi: 10.1371/journal.ppat.1005435
Magyar, I. (2011). “Chapter 6 - Botrytized Wines,” in Advances in food and nutrition research speciality wines. Ed. Jackson, R. S. (Elsevier, Waltham: Academic Press), 147–206. doi: 10.1016/B978-0-12-384927-4.00006-3
Mercier, A., Simon, A., Lapalu, N., Giraud, T., Bardin, M., Walker, A.-S., et al. (2021). Population genomics reveals molecular determinants of specialization to tomato in the polyphagous fungal pathogen Botrytis cinerea in France. Phytopathology 111, 2355–2366. doi: 10.1094/PHYTO-07-20-0302-FI
Michael, P. J., Lui, K. Y., Thomson, L. L., Lamichhane, A. R., Bennett, S. J. (2021). Impact of preconditioning temperature and duration period on carpogenic germination of diverse Sclerotinia sclerotiorum populations in southwestern Australia. Plant Dis. 105, 1798–1805. doi: 10.1094/PDIS-09-20-1957-RE
Mundy, D. C., Elmer, P., Wood, P., Agnew, R. (2022). A review of cultural practices for Botrytis bunch rot management in New Zealand vineyards. Plants (Basel) 11, 3004. doi: 10.3390/plants11213004
Nicolaisen, M., West, J. S., Sapkota, R., Canning, G. G. M., Schoen, C., Justesen, A. F. (2017). Fungal communities including plant pathogens in nepar surface air are similar across northwestern Europe. Front. Microbiol. 8. doi: 10.3389/fmicb.2017.01729
Pintye, A., Ropars, J., Harvey, N., Shin, H.-D., Leyronas, C., Nicot, P. C., et al. (2015). Host phenology and geography as drivers of differentiation in generalist fungal mycoparasites. PloS One 10, e0120703. doi: 10.1371/journal.pone.0120703
Romanazzi, G., Moumni, M. (2022). Chitosan and other edible coatings to extend shelf life, manage postharvest decay, and reduce loss and waste of fresh fruits and vegetables. Curr. Opin. Biotechnol. 78, 102834. doi: 10.1016/j.copbio.2022.102834
Samaras, A., Hadjipetrou, C., Karaoglanidis, G. (2021). Bacillus amyloliquefaciens strain QST713 may contribute to the management of SDHI resistance in Botrytis cinerea. Pest Manag Sci. 77, 1316–1327. doi: 10.1002/ps.6145
Schumacher, J. (2023). “Role of Light in the Life Cycle of Botrytis cinerea,” in Plant relationships: fungal-plant interactions the mycota. Eds. Scott, B., Mesarich, C. (Cham: Springer International Publishing), 329–346. doi: 10.1007/978-3-031-16503-0_14
Silva, R. A., Ferro, C. G., Lehner, M., da, S., Paula, T. J., Mizubuti, E. S. G. (2021b). The population of Sclerotinia sclerotiorum in Brazil is structured by mycelial compatibility groups. Plant Dis. 105, 3376–3384. doi: 10.1094/PDIS-01-21-0110-RE
Silva, C. J., van den Abeele, C., Ortega-Salazar, I., Papin, V., Adaskaveg, J. A., Wang, D., et al. (2021a). Host susceptibility factors render ripe tomato fruit vulnerable to fungal disease despite active immune responses. J. Exp. Bot. 72, 2696–2709. doi: 10.1093/jxb/eraa601
Souibgui, E., Bruel, C., Choquer, M., de Vallée, A., Dieryckx, C., Dupuy, J. W., et al. (2021). Clathrin is important for virulence factors delivery in the necrotrophic fungus Botrytis cinerea. Front. Plant Sci. 12. doi: 10.3389/fpls.2021.668937
Williamson, B., Tudzynski, B., Tudzynski, P., Van Kan, J. A. L. (2007). Botrytis cinerea: The cause of grey mould disease. Mol. Plant Pathol. 8, 561–580. doi: 10.1111/j.1364-3703.2007.00417.x
Wytinck, N., Manchur, C. L., Li, V. H., Whyard, S., Belmonte, M. F. (2020). dsRNA uptake in plant pests and pathogens: insights into RNAi-based insect and fungal control technology. Plants (Basel) 9, 1780. doi: 10.3390/plants9121780
Xie, C., Shang, Q., Mo, C., Xiao, Y., Wang, G., Xie, J., et al. (2021). Early secretory pathway-associated proteins SsEmp24 and SsErv25 are involved in morphogenesis and pathogenicity in a filamentous phytopathogenic fungus. mBio 12, e03173–e03121. doi: 10.1128/mBio.03173-21
Keywords: Botrytis, Sclerotinia, fungal diversity, host adaptation, fungal development, fungal epidemiology, disease management, host pathogen interaction
Citation: Bar M and Romanazzi G (2023) Editorial: Highlights from the Botrytis and Sclerotinia 2022 Joint Conference. Front. Plant Sci. 14:1326020. doi: 10.3389/fpls.2023.1326020
Received: 22 October 2023; Accepted: 01 November 2023;
Published: 08 November 2023.
Edited and Reviewed by:
Youxiong Que, Fujian Agriculture and Forestry University, ChinaCopyright © 2023 Bar and Romanazzi. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Maya Bar, bWF5YWJhckB2b2xjYW5pLmFncmkuZ292Lmls