CASE REPORT article

Front. Pediatr., 19 June 2023

Sec. Pediatric Infectious Diseases

Volume 11 - 2023 | https://doi.org/10.3389/fped.2023.1130775

Case report: The clinical utility of metagenomic next-generation sequencing in mucormycosis diagnosis caused by fatal Lichtheimia ramosa infection in pediatric neuroblastoma

  • 1. Pediatric Intensive Care Unit, Children’s Hospital of Fudan University, National Center for Children’s Health, Shanghai, China

  • 2. Dermatological Department, Children’s Hospital of Fudan University, National Center for Children’s Health, Shanghai, China

  • 3. Surgical Oncology Department, Children’s Hospital of Fudan University, National Center for Children’s Health, Shanghai, China

  • 4. Institute of Antibiotics, Huashan Hospital, Fudan University, Shanghai, China

  • 5. Lab. of Mycology, Department of Dermatology, Huashan Hospital, Fudan University, Shanghai, China

  • 6. Radiology Department, Children’s Hospital of Fudan University, National Center for Children’s Health, Shanghai, China

  • 7. Medical Department, Nanjing Dinfectome Technology Inc., Nanjing, China

Abstract

Lichtheimia ramosa (L. ramosa) is an opportunistic fungal pathogen of the order Mucorales that may result in a rare but serious mucormycosis infection. Mucormycosis could be angioinvasive, causing thrombosis and necrosis in the nose, brain, digestive tract, and respiratory tract. The infection is highly lethal, especially in immunocompromised hosts, and the incidence has been on the rise. However, due to its relatively low incidence in pediatric population and the challenges with diagnosis, the awareness and management experience for pediatric mucormycosis are extremely limited, which might lead to poor outcomes. In this study, we comprehensively reviewed the course of a fatal rhinocerebral mucormycosis case in a pediatric neuroblastoma patient receiving chemotherapy. Due to a lack of awareness of the infection, the standard care of amphotericin B treatment was delayed and not administered until the identification of L. ramosa by metagenomic next-generation sequencing (mNGS)-based pan-pathogen detection of the patient's peripheral blood sample. We also reviewed the literature on L. ramosa infection cases reported worldwide between 2010 and 2022, with an analysis of clinical manifestation, prognosis, and epidemiological data. Our study not only highlighted the clinical value of comprehensive mNGS in rapid pathogen detection but also raised awareness of recognizing lethal fungal infection early in immunocompromised hosts including pediatric cancer patients.

Introduction

Mucormycosis is a highly lethal infection caused by the opportunistic fungal pathogens of the Mucorales order, usually in patients with malignancies, transplantation, and diabetes (1). It is the world's third most common invasive mycosis after candidiasis and aspergillosis (2). The clinical management of mucormycosis has drawn increasing attention, accompanying the growing number of invasive mucormycosis reported during the present coronavirus disease (COVID-19) pandemic (3). Based on the infection manifestations, it can be classified into rhinocerebral, pulmonary, gastrointestinal, cutaneous, disseminated, and uncommon types (1). Rhinocerebral mucormycosis refers to mucormycosis that enters the nasal cavity through the junction of skin and mucosa, then spreads to the palate, sinus, and orbit, and finally causes intracranial infection due to vascular invasion or bone destruction. The most common pathogens of mucormycosis are Rhizopus spp., Mucor spp., and Lichtheimia spp. (4). Rhizopus spp. is currently the most common pathogen of mucormycosis worldwide, especially in rhinocerebral mucormycosis.

The nomenclature and taxonomy of subphylum Mucoromycotina have been evolving in recent years. In the subphylum of Mucoromycotina, Absidia corymbifera was a common clinical pathogen, especially in the secondary infection of skin lesions after severe trauma or burn. In 2007, Hoffman et al. (5) classified thermotolerant Absidia as Mycocladus, which then comprises the three species of M. corymbifer, M. blakesleeanus, and M. hyalospora based on their morphological, physiological, and phylogenetic characteristics. In 2009, the genus Mycocladus was renamed Lichtheimia and divided into two species, L. corymbifera and L. ramosa, and the former was found to be more resistant to amphotericin B (6). In 2010, the genus Lichtheimia was further classified into five species: L. corymbifera, L. ornata, L. ramosa, L. hyalospora, and L. sphaerocystis, by their molecular markers, mating tests, morphology, and growth rate (7). The first three species have been reported to be clinically relevant.

The incidence of mucormycosis has been studied globally showing a general trend of increase and geographic differences (810). Though lacking statistics on the exact burden of mucormycosis, the prevalence has been estimated based on population or hospital-based studies worldwide and the differences between developed and developing countries were observed, resulted from multiple factors including risk groups, healthcare accessibility, clinical management and intervention (11). Generally speaking, the incidence of mucormycosis in pediatric population is relatively lower than that in adults, which lead to less awareness of the disease regarding the clinical diagnosis and limited experience in disease management (12). Similar to adult patients, the common risk factors in children include hematologic malignancy, stem cell/solid organ transplant, autoimmune diabetes mellitus, premature infants, and so on (13). However, diagnosing pediatric mucormycosis is very challenging due to the lack of straightforward testing approaches and complicated clinical manifestations and symptoms (14).

At present, the treatment mainly relies on amphotericin B. However, the renal and hepatic toxicity of amphotericin B formulations should be taken into account, especially for immunodeficient patients, and therefore, a modified dose should be considered in intolerant cases (15, 16). Early diagnosis, timely treatment with prescribed drugs, and surgical operations are therefore essential. In this study, we reported the disease course of a lethal L.ramosa infection in a pediatric cancer patient receiving chemotherapy. The empirical diagnosis and treatment were initially suboptimal due to a lack of awareness of the infection until the identification of L.ramosa by metagenomic next-generation sequencing (mNGS). The patient died two days later due to multiple organ failures. We also performed the first comprehensive literature review of L. ramosa infection cases documented between 2010 and 2022 to augment the understanding of the clinical manifestation, prognosis, and risk factors of mucormycosis.

Methods

To comprehensively study the world-wide reported mucormycosis cases, we searched for literatures in PubMed, Ovid MEDLINE, Embase, WANFANG, and CNKI Database. Due to the redefinition and classification of Lichtheimia in 2010 (7), we decided to focus on the publications between January 2010 and February 2022 with any of the following key words: Lichtheimia ramosa, ramosa, Lichtheimia, mucormycosis, Absidia corymbifera, Mycocladus corymbifera, L. corymbifera, L. ornata, L. ramosa, Absidia ramosa, Rhizopus ramosus, Mucor ramosus, L. hyalospora, L. blakesleeaana, and L. sphaerocystis. Only the cases with confirmed L. ramosa infection were included, whose clinical and epidemiological data were summarized in Table 1.

Table 1

CaseYearAge/SexGeographyUnderlying diseaseSite of infectionClinical manifestationMethod of identificationTreatmentOutcome
1 (17)201010/FSpain2nd relapse of AMLPulmonaryCough, tough respiratory, agranulocytosisSmear staining, histopathology, sequencingUnspecifiedDeath
2 (18)201332/MGreeceAutomobile accident with large deep woundCutaneousA subcutaneous cavity in the left lumbar region with abscessMicroscopy, histopathology, PCR sequencingSurgical debridement, antimycotic solution cleansing, broad-spectrum antibioticsCured
3 (19)201384/MFranceSevere arterial occlusion of left lower limb with severe sepsis, type 2 diabetesCutaneousGray—white deposits on amputation woundsMicroscopy, histopathology, gene sequencingSurgical debridement, LAMB, calcium alginateCured
4 (20)201327/MFranceAcute leukemia, hand injury and fasciitisCutaneousFasciitisPathology, histopathologyLAMBDeath
5 (21)2013121/MFranceAutomobile accident with multiple compound fracturesCutaneousGreen, mouldy dischargesHistopathologyLAMB, partial amputationCured
6 (21)2013172/MFranceBilateral amputation for acute ischemiaCutaneousPurulent, mouldy dischargesHistopathology, microscopyLAMBDeath
7 (22)201359/MFranceNon-Hodgkin lymphoma, diabetes mellitusKidneyUnspecifiedHistopathology, qPCRLAMBCured
8 (23)201352/MTurkeyAIDS with antiretroviral therapyPulmonarySystemic symptoms mainly at lungHistopathology, PCRAmphotericin B deoxycholate, LAMBDeath
9 (24)20134/FFranceChronic intestinal obstruction syndrome, multiple organ transplantationTransplanted stomachDigestive tract perforation, massive gastric bleedingPathology, PCRLAMBCured
10 (25)2013–201650/FFranceBurn (60%)CutaneousUnspecifiedHistopathology, qPCRLAMB, caspofunginDeath
11 (25)2013–201663/FFranceBurn (35%)CutaneousUnspecifiedHistopathology, qPCRNo drug usedCured
12 (25)2013–201642/MFranceBurn (50%)CutaneousUnspecifiedHistopathology, qPCRLAMB, caspofunginCured
13 (25)2013–201665/FFranceBurn (40%)CutaneousUnspecifiedHistopathology, qPCRNo drug usedCured
14 (25)2013–201643/MFranceBurn (80%)CutaneousUnspecifiedHistopathology, qPCRLAMB, caspofunginCured
15 (26)201420/FIndiaBurn (60%)CutaneousEmpyrosis, shockBiopsy, histopathologySurgical debridement, amphotericin B deoxycholate, ImipenemCured
16 (27)20142n.a.IndiaUnspecified1 bronchoalveolar lavage fluid, 1 pulmonary, 1 cutaneousUnspecifiedDNA sequencingUnspecifiedUnspecified
17 (28)201455/MEgyptSolid organ transplantPulmonaryUnspecifiedHistopathology, microscopy DNA sequencingLAMBDeath
18 (28)201445/MEgyptDiabetesPulmonaryUnspecifiedHistopathology, microscopy DNA sequencingLAMB, itraconazoleCured
19 (28)201455/MEgyptDiabetesPulmonaryUnspecifiedHistopathology, microscopy DNA sequencingLAMB, itraconazoleCured
20 (29)20153n.a.IndiaUnspecified, may have empryrosis and diabetes3 Rhinocerebral, 1 CutaneousUnspecifiedMicroscopy, histopathologyLAMB or Amphotericin B deoxycholate1 death 3 cured
21 (30)20158/MJapanAML relapse, chemotherapy, hematopoietic stem cell transplantationDisseminatedPneumonia, diffuse thickening of alveolar walls with various inflammatory cellsHistopathology, sequencingLAMB, cord blood transplantationDeath
22 (31)201656/MSpainDiabetes, H1N1 infectionDisseminatedBronchitis, pulmonary thromboembolismPost-mortem examinationmeropenem, levofloxacin, oseltamivir, cotrimoxazole, linezolid, voriconazole, corticosteroidsDeath
23 (32)20167/MUSAChronic granuloma, post-transplantation, immunosuppressionPulmonaryVascular embolismMicroscopyLAMBDeath
24 (32)20165/MUSAChronic granuloma, pulmonary nodulesPulmonaryVascular embolismMicroscopyLAMBCured
25 (33)201741/MSpainAcute myeloid leukemia, chemotherapy, neutropeniaPulmonaryUnspecifiedHistopathology, pathology, microscopyLAMB, Posaconazole, surgeryCured
26 (33)201761/MSpainLymphoblastic acute leukemia, chemotherapy, neutropenia, traumaCutaneousUnspecifiedHistopathology, pathology, microscopyLAMB, Posaconazole, surgeryCured
27 (33)201772/FSpainSurgery, squamous cell carcinomaCutaneousUnspecifiedHistopathology, pathology, microscopyLAMB, surgeryCured
28 (33)201749/MSpainDiffuse large B-cell lymphoma, haploidentical HSCT, neutropeniaDisseminatedUnspecifiedHistopathology, PCR, microscopyLAMB, Posaconazole, micafunginRemission
29 (34)201853/FJapanEsophageal cancer, pneumococcal pneumonia, transverse colon perforationColonUnspecifiedPCRLAMBCured
30 (35)201843/MChinaSurgery on nose bridge eight years agoCutaneousChronic granulomatous disease on faceHistopathologyAmphotericin B (unspecified)Cured
31 (36)202038/MNetherlandsKidney transplantationTransplanted kidneyKidney painPathologyLAMB, antifungal induction therapy, debridement, lavageCured
32 (37)2020n.a.USACOVID-19UnspecifiedUnspecifiedcfDNAUnspecifiedUnspecified
33 (38)202153/MChinaTooth extractionRhinocerebralFever, headache, slurred speech, brainstem failureCFS mNGSLAMBRemission
34 (39)20215/MArgentinaSeizures and liver failure, medication of valproic acid,CutaneousRound necrotic lesions with black margins in chin area, posterior involvement of soft tissuePathology, PCR, histopathologyDebridement, LAMBCured
35 (40)2021Late 50s/MNetherlandsCOVID-19PulmonaryPulmonary cavities and a reversed halo sign by CTHistopathologyLAMB, posaconazoleDeath
36 (41)202146/MSpainCOVID-19, kidney transplantation, arterial hypertensionMusculoskeletalPain, hematoma of lower right limb, muscle tissue necrosisHistopathologyLAMB, isavuconazol, debridementCured

Summary of L.ramosa infection cases reported between 2010 and 2022.

LAMB, liposomal amphotericin B; AML, acute myeloid leukemia; CSF, cerebrospinal fluid; mNGS, metagenomic next-generation sequencing; CT, computed tomography; n.a/, not available; cfDNA, cell-free DNA.

1

Possible person-to-person transmission in intensive care.

2

3 of 54 cases were detected with L. ramosa.

3

4 of 38 cases in this study infected with L. ramosa, individual details were not specified.

Results

Case presentation

A 6-year-old male patient developed a fever accompanied by nasal bleeding and a small amount of vomiting. He was admitted to a local hospital on October 6, 2021 (Day 0 after symptom onset, DAO 0). Before this hospital admission, the patient was admitted to the hospital in July 2019 due to a six-month poor appetite and significant weight loss, as well as right leg pain for 20 days. He was then diagnosed of neuroblastoma accompanied by intracranial and multiple bone metastases after a complete bone marrow biopsy. The patient completed three cycles of maintenance chemotherapy for high-risk neuroblastoma and radical resection of the retroperitoneal tumor under general anesthesia. Starting from DAO 0, routine peripheral blood testings were performed regularly to monitor the patient's conditions, which showed constantly low levels of white blood cells, neutrophils, platelets, and Hemoglobin (Figure 1A). Up till DAO13, the patient was empirically suspected of having a bacterial infection post-chemotherapy and treated as follows (Figure 1A): piperacillin/tazobactam (45 mg/kg, q8h), cefazoxime (50 mg/kg, bid), cefoperazone sulbactam (50 mg/kg, q12h), meropenem (20 mg/kg, q8h), vancomycin (10 mg/kg, q6h), and metronidazole (7.5 mg/kg, q8h) treatment. The patient also received the infusion of platelet (1 U) on DAOs of 3, 7, and 12, hemoglobin (1.5 U) on DAOs of 8 and 11, and recombinant human granulocyte colony-stimulating factor (rhGCSF, 150 µg, qd) on DAOs of 2–13. After the whole antibacterial treatment, the patient still experienced intermittent fever, nasal bleeding, and mouth pain (Figures 1A,B). The C-Reactive protein (CRP) level increased to 103.5 mg/L (DAO 10) and 181.0 mg/L (DAO 13). The conventional culture with blood samples at the local hospital failed to detect the presence of any possible causative pathogens.

Figure 1

On DAO 14, the patient was admitted to Pediatric Intensive Care Unit (PICU), Children's Hospital of Fudan University, due to severe conditions, including a high fever up to 39.2°C, a small amount of blood oozing from both eyes, and progressive gangrene. The standard cultivate experiments were performed with blood, throat swab, and anal swab samples, but all returned negative results. (1–3)-β-D-Glucan (G) and glactomannan (GM) tests and lipopolysaccharides (LPS) were within the normal range but the evaluated levels of procalcitonin (PCT, 4.27 ng/ml) and Interleukin 6 (IL-6, 3.57 ng/ml) were reported. Computed tomography (CT) showed scalp abscess (Figures 2A,B), pulmonary infarction (Figures 2C,D), and evidence of osteomyelitis (Figures 2E,F). The following treatments were given to relieve the severe symptoms (Figure 1A): meropenem (40 mg/kg, q8h, three days), vancomycin (15 mg/kg, q6h, three days), piperacillin/tazobactam (112.5 mg/kg, q8h, one day), micafungin (2 mg/kg, qd, three days), infusion of platelet (1 U, DAO 14), hemoglobin (1 U, DAO 15), and albumin (10 g, DAOs 14–16), and rhGCSF (150 µg, qd, DAOs 2–13). However, the patient showed no noticeable improvement (Figures 1A,B), and his CRP remained above 160 mg/l. In the meantime, the peripheral blood sample was subject to metagenome next-generation sequencing (mNGS) to comprehensively search for possible pathogens (DAO 14). On DAO 15, the patient received rescue, endotracheal intubation, and vasoactive drug therapy due to worsened conditions. On DAO 16, L. ramosa was identified by mNGS with unique DNA sequences covering 8.11% of the L. ramosa genome (Figure 3A), supporting the diagnosis of mucormycosis by L. ramosa infection. Amphotericin B deoxycholate (5 mg/kg, ivgtt) was immediately administered, and tissue samples were collected from the nasal gangrene region for microscopic examination, which confirmed the diagnosis of L. ramosa infection shortly thereafter (Figures 3B–E). Despite the immediate treatment by amphotericin B after the detection of L. ramosa, the patient died of severe multiple organ failure on DAO 16.

Figure 2

Figure 3

Literature review

We retrieved 25 publications with a total of 41 L. ramosa infectious cases (Table 1) where the majority were from Europe (22/41, 53.7%), followed by 12 from Asia (29.3%), 4 from America (9.8%), and 3 from Africa (7.3%). The most common sites of infection were cutaneous (N = 17) and pulmonary (N = 10). As expected, most cases were immunocompromised subjects with underlying risk factors such as cancer (9, 22.0%), diabetes (6, 14.6%), burn (6, 14.6%), and organ transplantation (5, 12.2%). Excluding eight cases with unknown age at diagnosis, the median age was 46 years old (range: 4–84) and six of them were under 10 years old. More specifically, five of the six pediatric cases were treated with liposomal amphotericin B (LAMB) and three were cured. While among all treatment-specified cases, 32 of them received the Amphotericin B treatment which successfully cured 72% (23/32) of the patients. Meanwhile, we observed a trend of adopting NGS-based methods in pathogen detection and more recently, a rising incidence in COVID-19 patients worldwide after 2020.

Discussion

In the past decades (42), mucormycosis incidence has increased rapidly, with the overall mortality rate as high as 90%. Mucormycosis mainly occurs in immunocompromised patients with conditions such as diabetes mellitus, malignancies, burns, autoimmune diseases, penetrating trauma or receiving corticosteroids etc (1). Notably, several studies have witnessed a resurgence of mucormycosis during the present global COVID-19 pandemic, which indicated that the accompanied immunocompromised state and steroid use in COVID-19 patients were the risk factors underlying mucormycosis (43, 44).

The prevalence of diagnosed infection shows a geographical difference, mainly distributed in Europe (68.2%), followed by Asia (16%) and Africa (9%) (45, 46). In developed countries, the number of Lichtheimia infection cases is high among hematopoietic stem cell transplantation recipients and hematological malignancies. In contrast, mucormycosis is more associated with diabetes mellitus and ketoacidosis in developing countries (46).

To our best knowledge, we reported the first case of mucormycosis by L. ramosa in a pediatric neuroblastoma patient, who had received chemotherapy prior to L. ramosa infection and neuroblastoma is the most common extra-cranial solid tumor in infants and children and represents 8%–10% of all childhood tumors (47). Based on our literature review, cancer is an important risk factor underlying L. ramosa infection in both pediatric and adult populations. A total of six pediatric L. ramosa infection cases were included in our literature review and both of the AML relapsed children died after infection (17, 30). In addition, early diagnosis and treatment are essential for the cure, as demonstrated by the cases collected in our study. For instance, Cases 23 and 24 are brothers who were both infected by L. ramosa (32). The older patient died, while the younger patient received early detection and timely treatment, leading to a favorable prognosis.

For now, the gold standard for diagnosis is histopathology testing, mainly with tissue samples. Traditional invasive procedures for etiologic diagnosis have limitations such as patient instability (37). In addition, the positive rate of histopathological and microbiological methods from cultivated clinical samples, is around 50% or even lower due to the morphological similarity between different Lichtheimia species (2948). Therefore, molecular testing such as polymerase chain reaction (PCR) or NGS-based technologies using serum samples are essential supplemental tools for diagnosis. In our case, the local hospital lacked awareness of rare fungal infections and access to molecular tests such as mNGS, leading to the delay of diagnosis and treatment. The presented case also indicated the lethality of L. ramosa infection in pediatric cancer patients, and we believe a more timely etiologic diagnosis when the initial pan-antibiotics application was ineffective could result in a favorable outcome. Thus, mNGS is highly recommended for diagnostically challenging cases with undetermined infection and complex manifestations, especially for pediatric patients, which enables rapid and affordable pan-pathogen screening to guide targeted intervention against deadly infections. Admittedly, mNGS has limitations, especially the false-positive results caused by contamination. Also, the reference database selection and interpretation may affect the pathogen detection (49). Thus, alternative methods are needed to validate mNGS findings.

Amphotericin B is considered the first choice for mucormycosis (15). Indeed, 75.0% (24/32) of the patients that received the treatment of amphotericin B recovered from L. ramosa infection in our literature review. Furthermore, combining amphotericin B and surgical debridement of infected tissues was reported to be able to improve the cure rate. For example, Schneidawind et al. (50) reported three acute myeloid leukemia (AML) patients complicated with pulmonary mucormycosis who were successfully treated by combined LAMB and surgical resection before stem cell transplantation (SCT). Similarly, LAMB treatment effectively prevented infection recurrence despite immunosuppressive drugs in an SCT case with pulmonary mucormycosis after surgical resection (51). Alternatively, posaconazole has been reported as a salvage treatment for amphotericin B refractory patients, but it is less effective and more likely to cause resistance (52).

In conclusion, we reported a rhinocerebral mucormycosis pediatric case caused by L. ramosa with neuroblastoma and reviewed the L. ramosa infection cases published between 2010 and 2022. The limited number of clinical cases, lack of awareness, and technical challenges of detecting different infection sites may restrict the interpretation of the literature analysis. Our case demonstrates the importance of rapid pan-pathogen screening by mNGS to guide timely treatment selection against fast-developing, fatal infections for pediatric cancer patients.

Statements

Data availability statement

The datasets presented in this article are not readily available because of ethical and privacy restrictions. Requests to access the datasets should be directed to the corresponding authors.

Ethics statement

Ethical review and approval was not required for the study on human participants in accordance with the local legislation and institutional requirements. Written informed consent to participate in this study was provided by the participants’ legal guardian/next of kin. Written informed consent was obtained from the participant/patient(s) for the publication of this case report.

Author contributions

HS, XC, JL, WC, and GL contributed to the conceptualization; HS, XC, JL, YY, RD, JW, LL, QS, WC, and GL were responsible for data curation; HS, XC, YY, RD, and GL performed the formal analysis; GY, YM, QO, and MS validated the results; HS, XC, JL and WC wrote the original draft; GY, YM, QO, MS, WC, and GL revised the manuscript; GY and GL contributed to the funding acquisition. All authors contributed to the article and approved the submitted version.

Funding

This work was supported by the National Key Research and Development Program of China under Grant [2021YFC2701800] and [2021YFC2701805].

Acknowledgments

The authors thank the patient and the patient's guardian for providing consent for publication. We also thank all staff involved in this case study.

Conflict of interest

YM, QO, and MS are employees of Nanjing Dinfectome Technology Inc., China.

The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

References

  • 1.

    SkiadaAPavleasIDrogari-ApiranthitouM. Epidemiology and diagnosis of mucormycosis: an update. J Fungi (Basel). (2020) 6(4):265. 10.3390/jof6040265

  • 2.

    KriengkauykiatJItoJIDadwalSS. Epidemiology and treatment approaches in management of invasive fungal infections. Clin Epidemiol. (2011) 3:17591. 10.2147/CLEP.S12502

  • 3.

    Al-TawfiqJAAlhumaidSAlshukairiANTemsahMHBarryMAl MutairAet alCOVID-19 and mucormycosis superinfection: the perfect storm. Infection. (2021) 49:83353. 10.1007/s15010-021-01670-1

  • 4.

    SkiadaAPaganoLGrollAZimmerliSDupontBLagrouKet alZygomycosis in Europe: analysis of 230 cases accrued by the registry of the European confederation of medical mycology (ECMM) working group on zygomycosis between 2005 and 2007. Clin Microbiol Infect. (2011) 17:185967. 10.1111/j.1469-0691.2010.03456.x

  • 5.

    HoffmannKDischerSVoigtK. Revision of the genus Absidia (Mucorales, Zygomycetes) based on physiological, phylogenetic, and morphological characters; thermotolerant Absidia spp. form a coherent group, Mycocladiaceae fam. nov. Mycol Res. (2007) 111:116983. 10.1016/j.mycres.2007.07.002

  • 6.

    HoffmannKVoigtK. Absidia parricida plays a dominant role in biotrophic fusion parasitism among mucoralean fungi (Zygomycetes): Lentamyces, a new genus for A. parricida and A. zychae. Plant Biol (Stuttg). (2009) 11:53754. 10.1111/j.1438-8677.2008.00145.x

  • 7.

    Alastruey-IzquierdoAHoffmannKde HoogGSRodriguez-TudelaJLVoigtKBibashiEet alSpecies recognition and clinical relevance of the zygomycetous genus Lichtheimia (syn. Absidia pro parte, Mycocladus). J Clin Microbiol. (2010) 48:215470. 10.1128/JCM.01744-09

  • 8.

    JeongWKeighleyCWolfeRLeeWLSlavinMAKongDCMet alThe epidemiology and clinical manifestations of mucormycosis: a systematic review and meta-analysis of case reports. Clin Microbiol Infect. (2019) 25:2634. 10.1016/j.cmi.2018.07.011

  • 9.

    Torres-NarbonaMGuineaJMartinez-AlarconJMunozPGadeaIBouzaEet alImpact of zygomycosis on microbiology workload: a survey study in Spain. J Clin Microbiol. (2007) 45:20513. 10.1128/JCM.02473-06

  • 10.

    KontoyiannisDPYangHSongJKelkarSSYangXAzieNet alPrevalence, clinical and economic burden of mucormycosis-related hospitalizations in the United States: a retrospective study. BMC Infect Dis. (2016) 16:730. 10.1186/s12879-016-2023-z

  • 11.

    PrakashHChakrabartiA. Global epidemiology of mucormycosis. J Fungi (Basel). (2019) 5(1):26. 10.3390/jof5010026

  • 12.

    SteinbachWJ. Latest thoughts on treating pediatric mucormycosis. J Pediatric Infect Dis Soc. (2020) 9:6404. 10.1093/jpids/piaa106

  • 13.

    ZaoutisTERoilidesEChiouCCBuchananWLKnudsenTASarkisovaTAet alZygomycosis in children: a systematic review and analysis of reported cases. Pediatr Infect Dis J. (2007) 26:7237. 10.1097/INF.0b013e318062115c

  • 14.

    SchuetzANWalshTJ. Importance of fungal histopathology in immunocompromised pediatric patients: it’s not just “Aspergillus” anymore. Am J Clin Pathol. (2015) 144:1857. 10.1309/AJCPE3NSJ2RYLENS

  • 15.

    CornelyOAAlastruey-IzquierdoAArenzDChenSCADannaouiEHochheggerBet alGlobal guideline for the diagnosis and management of mucormycosis: an initiative of the European confederation of medical mycology in cooperation with the mycoses study group education and research consortium. Lancet Infect Dis. (2019) 19:e40521. 10.1016/S1473-3099(19)30312-3

  • 16.

    YoshidaMTamuraKMasaokaTNakajoE. A real-world prospective observational study on the efficacy and safety of liposomal amphotericin B in 426 patients with persistent neutropenia and fever. J Infect Chemother. (2021) 27:27783. 10.1016/j.jiac.2020.10.005

  • 17.

    BorrásRRosellóPChiletMBravoDde LomasJGNavarroD. Positive result of the Aspergillus galactomannan antigen assay using bronchoalveolar lavage fluid from a patient with an invasive infection due to Lichtheimia ramosa. J Clin Microbiol. (2010) 48:30356. 10.1128/JCM.00902-10

  • 18.

    BibashiEde HoogGSPavlidisTESymeonidisNSakantamisAWaltherG. Wound infection caused by Lichtheimia ramosa due to a car accident. Med Mycol Case Rep. (2013) 2:710. 10.1016/j.mmcr.2012.12.001

  • 19.

    de ChaumontAPierretCJanvierFGoudardYde KerangalXChapuisO. Mucormycosis: a rare complication of an amputation. Ann Vasc Surg. (2014) 28:1035.e159. 10.1016/j.avsg.2013.10.008

  • 20.

    CateauERandriamalalaEElsendoornAGiotJPdu SorbierCMRodierMH. Fatal-mixed cutaneous zygomycosis-aspergillosis: a case report. Mycopathologia. (2013) 176:4237. 10.1007/s11046-013-9706-4

  • 21.

    PoirierPNourrissonCGiboldLChalusEGuelonDDescampSet alThree cases of cutaneous mucormycosis with Lichtheimia spp. (ex Absidia/Mycocladus) in ICU. Possible cross-transmission in an intensive care unit between 2 cases. J Mycol Med. (2013) 23:2659. 10.1016/j.mycmed.2013.09.002

  • 22.

    MillonLLarosaFLepillerQLegrandFRocchiSDaguindauEet alQuantitative polymerase chain reaction detection of circulating DNA in serum for early diagnosis of mucormycosis in immunocompromised patients. Clin Infect Dis. (2013) 56:e95e101. 10.1093/cid/cit094

  • 23.

    KutluMErginCBirFHilmioğlu-PolatSGümralRNecanCet alPulmonary mucormycosis due to Lichtheimia ramosa in a patient with HIV infection. Mycopathologia. (2014) 178:1115. 10.1007/s11046-014-9761-5

  • 24.

    IrtanSLamerainMLesageFVerkarreVBougnouxMELanternierFet alMucormycosis as a rare cause of severe gastrointestinal bleeding after multivisceral transplantation. Transpl Infect Dis. (2013) 15:E2358. 10.1111/tid.12147

  • 25.

    FréalleERocchiSBacusMBacheletHPasquesooneLTavernierBet alReal-time polymerase chain reaction detection of Lichtheimia species in bandages associated with cutaneous mucormycosis in burn patients. J Hosp Infect. (2018) 99:6874. 10.1016/j.jhin.2018.02.004

  • 26.

    KaurRBalaKAhujaRBSrivastavPBansalU. Primary cutaneous mucormycosis in a patient with burn wounds due to Lichtheimia ramosa. Mycopathologia. (2014) 178:2915. 10.1007/s11046-014-9805-x

  • 27.

    ChowdharyAKathuriaSSinghPKSharmaBDolatabadiSHagenFet alMolecular characterization and in vitro antifungal susceptibility of 80 clinical isolates of mucormycetes in Delhi, India. Mycoses. (2014) 57(Suppl 3):97107. 10.1111/myc.12234

  • 28.

    ZakiSMElkholyIMElkadyNAAbdel-GhanyK. Mucormycosis in Cairo, Egypt: review of 10 reported cases. Med Mycol. (2014) 52:7380. 10.3109/13693786.2013.809629

  • 29.

    BalaKChanderJHandaUPuniaRSAttriAK. A prospective study of mucormycosis in north India: experience from a tertiary care hospital. Med Mycol. (2015) 53:24857. 10.1093/mmy/myu086

  • 30.

    SuzukiDKobayashiRHoriDKishimotoKSanoHYasudaKet alStem cell transplantation for acute myeloid leukemia with pulmonary and cerebral mucormycosis. Pediatr Int. (2016) 58:56972. 10.1111/ped.12866

  • 31.

    Mouronte-RoibásCLeiro-FernándezVBotana-RialMRamos-HernándezCLago-PreciadoGFiaño-ValverdeCet alLichtheimia ramosa: a fatal case of mucormycosis. Can Respir J. (2016) 2016:2178218. 10.1155/2016/2178218

  • 32.

    WinsteadMOzolekJNowalkAWilliamsJVander LugtMLinP. Disseminated Lichtheimia ramosa infection after hematopoietic stem cell transplantation in a child with chronic granulomatous disease. Pediatr Infect Dis J. (2017) 36:12224. 10.1097/INF.0000000000001589

  • 33.

    GuineaJEscribanoPVenaAMunozPMartinez-JimenezMDCPadillaBet alIncreasing incidence of mucormycosis in a large Spanish hospital from 2007 to 2015: epidemiology and microbiological characterization of the isolates. PLoS One. (2017) 12:e0179136. 10.1371/journal.pone.0179136

  • 34.

    KanekoYOinumaKITerachiTArimuraYNikiMYamadaKet alSuccessful treatment of intestinal mycosis caused by a simultaneous infection with Lichtheimia ramosa and Aspergillus calidoustus. Intern Med. (2018) 57:24214. 10.2169/internalmedicine.0254-17

  • 35.

    GengCLvXLiJJiangQYangRZhanP. Chronic subcutaneous infection due to Lichtheimia ramosa. J Eur Acad Dermatol Venereol. (2019) 33:e269. 10.1111/jdv.15137

  • 36.

    SpithovenEMBrunsAHWPetriBJHaasPJNguyenTQHagenFet alRenal transplant patient survives a donor-derived abdominal invasive mucormycosis (Lichtheimia ramos a). Med Mycol Case Rep. (2020) 30:3942. 10.1016/j.mmcr.2020.10.002

  • 37.

    La ViaWVDalaiSde VriesCRMacintyreAAhmedAA. 390. Non-invasive detection of co-infections in hospitalized patients with COVID-19 using the Karius test, a plasma-based next-generation sequencing test for microbial cell-free DNA, p S264. In (ed), Oxford University Press.

  • 38.

    LiuYZhangJHanBDuLShiZWangCet alCase report: diagnostic value of metagenomics next generation sequencing in intracranial infection caused by Mucor. Front Med (Lausanne). (2021) 8:682758. 10.3389/fmed.2021.682758

  • 39.

    ColmanSGiusianoGColmanCSosaMRojasF. Hepatic failure and malnutrition as predisposing factors of cutaneous mucormycosis in a pediatric patient. Med Mycol Case Rep. (2022) 35:269. 10.1016/j.mmcr.2021.12.005

  • 40.

    BuilJBvan ZantenARHBentvelsenRGRijpstraTAGoorhuisBvan der VoortSet alCase series of four secondary mucormycosis infections in COVID-19 patients, The Netherlands, December 2020 to May 2021. Euro Surveill. (2021) 26(23):pii = 2100510. 10.2807/1560-7917.ES.2021.26.23.2100510

  • 41.

    AranaCCuevas RamirezREXipellMCasalsJMorenoAHerreraSet alMucormycosis associated with COVID-19 in two kidney transplant patients. Transpl Infect Dis. (2021) 23:e13652. 10.1111/tid.13652

  • 42.

    HassanMIACseresnyesZAl-ZabenNDahseHMVilela de OliveiraRJWaltherGet alThe geographical region of origin determines the phagocytic vulnerability of Lichtheimia strains. Environ Microbiol. (2019) 21:456381. 10.1111/1462-2920.14752

  • 43.

    SongGLiangGLiuW. Fungal co-infections associated with global COVID-19 pandemic: a clinical and diagnostic perspective from China. Mycopathologia. (2020) 185:599606. 10.1007/s11046-020-00462-9

  • 44.

    RavaniSAAgrawalGALeuvaPAModiPHAminKD. Rise of the phoenix: Mucormycosis in COVID-19 times. Indian J Ophthalmol. (2021) 69:15638. 10.4103/ijo.IJO_310_21

  • 45.

    GuineaJEscribanoPVenaAMuñozPMartínez-JiménezMDCPadillaBet alCorrection: Increasing incidence of mucormycosis in a large Spanish hospital from 2007 to 2015: epidemiology and microbiological characterization of the isolates. PLoS One. (2020) 15:e0229347. 10.1371/journal.pone.0229347

  • 46.

    PanJTsuiCLiMXiaoKde HoogGSVerweijPEet alFirst case of rhinocerebral mucormycosis caused by lichtheimia ornata, with a review of lichtheimia infections. Mycopathologia. (2020) 185:55567. 10.1007/s11046-020-00451-y

  • 47.

    ColonNCChungDH. Neuroblastoma. Adv Pediatr. (2011) 58:297311. 10.1016/j.yapd.2011.03.011

  • 48.

    Garcia-HermosoDHoinardDGantierJCGrenouilletFDromerFDannaouiE. Molecular and phenotypic evaluation of Lichtheimia corymbifera (formerly Absidia corymbifera) complex isolates associated with human mucormycosis: rehabilitation of L. ramosa. J Clin Microbiol. (2009) 47:386270. 10.1128/JCM.02094-08

  • 49.

    MillerSChiuCRodinoKGMillerMB. Point-counterpoint: should we be performing metagenomic next-generation sequencing for infectious disease diagnosis in the clinical laboratory?J Clin Microbiol. (2020) 58:e0173919. 10.1128/jcm.01739-19

  • 50.

    SchneidawindDNannDVogelWFaulCFendFHorgerMet alAllogeneic hematopoietic cell transplantation in patients with acute myeloid leukemia and pulmonary mucormycosis. Transpl Infect Dis. (2012) 14:E16672. 10.1111/tid.12019

  • 51.

    SerioBRosamilioRGiudiceVZeppaPEspositoSFontanaRet alSuccessful management of pulmonary mucormycosis with liposomal amphotericin B and surgery treatment: a case report. Infez Med. (2012) 20(Suppl 2):437.

  • 52.

    van BurikJAHareRSSolomonHFCorradoMLKontoyiannisDP. Posaconazole is effective as salvage therapy in zygomycosis: a retrospective summary of 91 cases. Clin Infect Dis. (2006) 42:e615. 10.1086/500212

Summary

Keywords

Lichtheimia ramosa, mucormycosis, pediatric, neuroblastoma, mNGS (metagenomic next-generation sequencing)

Citation

Shen H, Cai X, Liu J, Yan G, Ye Y, Dong R, Wu J, Li L, Shen Q, Ma Y, Ou Q, Shen M, Chen W and Lu G (2023) Case report: The clinical utility of metagenomic next-generation sequencing in mucormycosis diagnosis caused by fatal Lichtheimia ramosa infection in pediatric neuroblastoma. Front. Pediatr. 11:1130775. doi: 10.3389/fped.2023.1130775

Received

18 January 2023

Accepted

30 May 2023

Published

19 June 2023

Volume

11 - 2023

Edited by

Ramos Amador Jose T, Complutense University of Madrid, Spain

Reviewed by

Fabianne Carlesse, University of São Paulo, Brazil Kazem Ahmadikia, Tehran University of Medical Sciences, Iran

Updates

Copyright

*Correspondence: Guoping Lu Weiming Chen

†These authors have contributed equally to this work

Disclaimer

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

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