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ORIGINAL RESEARCH article

Front. Oncol.
Sec. Cancer Immunity and Immunotherapy
Volume 14 - 2024 | doi: 10.3389/fonc.2024.1511958
This article is part of the Research Topic Studying the immune microenvironment of liver cancer using artificial intelligence View all 9 articles

Multiomic analysis of lactylation and mitochondria-related genes in hepatocellular carcinoma identified MRPL3 as a new prognostic biomarker

Provisionally accepted
Wenya Xing Wenya Xing 1Yuanzi Zhou Yuanzi Zhou 1Qiuzi Long Qiuzi Long 2Nan Yi Nan Yi 1Gaoyuan Wang Gaoyuan Wang 1*Rongwei Shi Rongwei Shi 3*Jinlong Huang Jinlong Huang 2*Xindong Yin Xindong Yin 1*Taiyang Zhu Taiyang Zhu 1*Shibing Cao Shibing Cao 1*
  • 1 Department of General Surgery, Affiliated Hospital of Nanjing University of Chinese Medicine, Jiangsu Province Hospital of Chinese Medicine, Nanjing, Liaoning Province, China
  • 2 Nanjing University of Chinese Medicine, Nanjing, Jiangsu Province, China
  • 3 Department of General General Internal Medicine, Affiliated Hospital of Nanjing University of Chinese Medicine, Jiangsu Province Hospital of Chinese Medicine, Nanjing, Liaoning Province, China

The final, formatted version of the article will be published soon.

    Background: Recent research has highlighted lactate’s crucial role in epigenetic regulation, particularly by influencing histone modifications that drive the initiation and progression of hepatocellular carcinoma (HCC). While mitochondria are known to regulate tumor behavior, the interaction between lactate metabolism and mitochondrial function in cancer tissues remains underexplored. Understanding this relationship may provide deeper insights into tumor metabolic reprogramming and reveal novel therapeutic targets for HCC and other malignancies. Methods: We conducted a comprehensive screening of lactylation- and mitochondria-associated genes (LMRGs) in HCC patients, followed by clustering based on these genes. Prognostic outcomes and pathway enrichment were analyzed across the identified clusters. Additionally, we developed a prognostic model based on LMRGs, examining its implications for survival, immune response, and drug sensitivity. In vitro experiments were performed to validate the expression patterns and functional role of MRPL3 in HCC. Results: We developed a prognostic model, named the LMRG model, incorporating three key genes: ACACA, MRPL3, and MRPS23. This model revealed significant differences in survival outcomes, immune responses, and drug sensitivity between patients with high and low LMRG scores. MRPL3 was found to be overexpressed in HCC, playing a critical role in tumor growth and metastasis. These results were further validated through in vitro experiments, confirming MRPL3’s role in HCC cell proliferation and invasion. Conclusion: We created a predictive model, LMRG, and identified MRPL3 as a key biomarker. Our findings suggest that MRPL3 has significant potential as a reliable predictive biomarker for clinical applications in HCC diagnosis and treatment.

    Keywords: Hepatocellular Carcinoma, lactylation, Epigenetic regulation, Mrpl3, Prognostic biomarkers

    Received: 15 Oct 2024; Accepted: 19 Dec 2024.

    Copyright: © 2024 Xing, Zhou, Long, Yi, Wang, Shi, Huang, Yin, Zhu and Cao. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

    * Correspondence:
    Gaoyuan Wang, Department of General Surgery, Affiliated Hospital of Nanjing University of Chinese Medicine, Jiangsu Province Hospital of Chinese Medicine, Nanjing, Liaoning Province, China
    Rongwei Shi, Department of General General Internal Medicine, Affiliated Hospital of Nanjing University of Chinese Medicine, Jiangsu Province Hospital of Chinese Medicine, Nanjing, Liaoning Province, China
    Jinlong Huang, Nanjing University of Chinese Medicine, Nanjing, Jiangsu Province, China
    Xindong Yin, Department of General Surgery, Affiliated Hospital of Nanjing University of Chinese Medicine, Jiangsu Province Hospital of Chinese Medicine, Nanjing, Liaoning Province, China
    Taiyang Zhu, Department of General Surgery, Affiliated Hospital of Nanjing University of Chinese Medicine, Jiangsu Province Hospital of Chinese Medicine, Nanjing, Liaoning Province, China
    Shibing Cao, Department of General Surgery, Affiliated Hospital of Nanjing University of Chinese Medicine, Jiangsu Province Hospital of Chinese Medicine, Nanjing, Liaoning Province, China

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