Dual RNA-Seq of Trunk Kidneys Extracted From Channel Catfish Infected With Yersinia ruckeri Reveals Novel Insights Into Host-Pathogen Interactions
- 1Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan, China
- 2The Key Laboratory for Quality and Safety Control of Aquatic Products, Ministry of Agriculture, Beijing, China
- 3Fish Disease Laboratory, Jiangxi Fisheries Research Institute, Nanchang, China
- 4Department of Gastroenterology, Zhongnan Hospital of Wuhan University, Wuhan, China
- 5Hubei Clinical Center & Key Lab of Intestinal & Colorectal Diseases, Zhongnan Hospital of Wuhan University, Wuhan, China
A Corrigendum on:
Dual RNA-Seq of Trunk Kidneys Extracted From Channel Catfish Infected With Yersinia ruckeri Reveals Novel Insights Into Host-Pathogen Interactions.
Yang Y, Zhu X, Zhang H, Chen Y, Song Y and Ai X (2021) Dual RNA-Seq of Trunk Kidneys Extracted From Channel Catfish Infected With Reveals Novel Insights Into Host-Pathogen Interactions. 12:775708. doi: 10.3389/fimmu.2021.775708
In the published article, there was an error in Figure 6A as published. Figure 5A was used instead of Figure 6A in the revision of the article. The corrected Figure 6A appears below.
Figure 6 Histogram of the top 20 enriched KEGG pathways of DEGs in Y. ruckeri at different time points. The Y-axis represents the KEGG pathway categories. The X-axis represents statistical significance of the enrichment. (A) represents the classification of total KEGG, (B) represents the top 20 KEGG pathways in the C2_T6 group, (C) represents the top 20 KEGG pathways in the C2_T12 group and (D) represents the top 20 KEGG pathways in the C2_T24 group.
In the published article, there was an error in the legend of Figure 1 as published. There was one mistake in the species names. The corrected legend appears below.
Figure 1 The gene expression profiles for channel catfish and Y. ruckeri during infection. A volcanic plot depicting the differences in the expression profiles of channel catfish and Y. ruckeri. The X-axis represents a log2 (fold change) and the Y-axis represents -log10 (p value). Red represents significantly upregulated genes whereas green represents significantly downregulated genes. Each dot represents a single gene. C1_T6(C2_T6) represents 6 hpi, C1_T12(C2_T12) represents the 12 hpi and C1_T24 (C2_T24) stands for 24 hpi.
“Figure 1. The gene expression profiles for channel catfish and Y. ruckeri during infection. A volcanic plot depicting the differences in the expression profiles of channel catfish and Y. ruckeri. The X-axis represents a log2 (fold change) and the Y-axis represents -log10 (p value). Red represents significantly upregulated genes whereas green represents significantly downregulated genes. Each dot represents a single gene. C1_T6(C2_T6) represents 6 hpi, C1_T12(C2_T12) represents the 12 hpi and C1_T24(C2_T24) stands for 24 hpi.”
In the published article, there was an error. A correction has been made to DISCUSSION, Paragraph 7. This sentence previously stated:
“The pathogen HlyA was severely down-regulated by the host, indicating that the pathogen did not rely on hemolysin to cause harm in the host trunk kidney.”
The corrected sentence appears below:
“The pathogen HlyB was up-regulated in the infection, indicating that the pathogen rely on hemolysin to cause harm in the host trunk kidney.”
The authors apologize for these errors and state that they do not change the scientific conclusions of the article in any way. The original article has been updated.
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Keywords: channel catfish, yersinia ruckeri, dual RNA-seq, host-pathogen interactions, immunity, virulence
Citation: Yang Y, Zhu X, Zhang H, Chen Y, Song Y and Ai X (2022) Corrigendum: Dual RNA-seq of trunk kidneys extracted from channel catfish infected with Yersinia ruckeri reveals novel insights into host-pathogen interactions. Front. Immunol. 13:982091. doi: 10.3389/fimmu.2022.982091
Received: 30 June 2022; Accepted: 07 July 2022;
Published: 27 July 2022.
Edited and reviewed by:
Geert Wiegertjes, Wageningen University and Research, NetherlandsCopyright © 2022 Yang, Zhu, Zhang, Chen, Song and Ai. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Xiaohui Ai, aixh@yfi.ac.cn; Yuhua Chen, 510026437@qq.com
†These authors share first authorship