Early Discovery of Children With Lysosomal Acid Lipase Deficiency With the Universal Familial Hypercholesterolemia Screening Program

Lysosomal acid lipase deficiency (LAL-D) is an autosomal recessive lysosomal storage disorder, caused by homozygous or compound heterozygous pathogenic variants in the LIPA gene. Clinically, LAL-D is under- and misdiagnosed, due to similar clinical and laboratory findings with other cholesterol or liver misfunctions. As a part of the Slovenian universal familial hypercholesterolemia (FH) screening, LAL-D is screened as a secondary condition among other rare dyslipidemias manifesting with hypercholesterolemia. Out of 669 children included, three were positive for a homozygous disease-causing splicing variant NM_000235.4: c.894G > A (NP_000226.2:p. Gln298Gln) in the LIPA gene (NG_008194.1). The mean age by the diagnosis of LAL-D was 9.8 ± 0.9 years. Moreover, all three LAL-D-positive children had an important elevation of transaminases and decreased activity of the lysosomal acid lipase enzyme. Abdominal MRI in all children detected an enlarged liver but a normal-sized spleen. In conclusion, universal FH screening algorithms with the confirmatory genetic analysis in the pediatric population enable also rare dyslipidemia detection at an early age. An important clinical criterion for differentiation between FH and the LAL-D-positive children has elevated transaminase levels (AST and ALT). In all three LAL-D positive children, an improvement in cholesterol and transaminase levels and steatosis of the liver has been seen after early treatment initiation.

Introduction

Lysosomal acid lipase deficiency (LAL-D) is an autosomal recessive lysosomal storage disorder, caused by homozygous or compound heterozygous disease-causing variants in the LIPA gene located on chromosome 10q23.2 (Pisciotta et al., 2017; Wilson and Patni, 2020). Depending on the genetic variant in the LIPA gene and consequently residual lysosomal acid lipase (LAL) activity, LAL-D can result in the very severe, infantile-onset, and lethal form known as Wolman disease, or in the milder, late-onset phenotype, known also as cholesteryl ester storage disease (CESD) (Reiner et al., 2014; Pullinger et al., 2015; Sjouke et al., 2016; Maciejko, 2017).

In CESD, various symptoms are present and usually begin in midchildhood with an average age of 5 (Maciejko, 2017), although they can develop later in adulthood. Most of the affected children present symptoms, such as elevated low-density lipoprotein cholesterol (LDL-C) levels, low high-density lipoprotein cholesterol (HDL-C) levels, and accelerated atherosclerotic cardiovascular disease (CVD) hepatomegaly, and splenomegaly, gradually leading to liver fibrosis and cirrhosis. Moreover, some children suffer from malabsorption, vomiting, diarrhea, steatorrhea, and growth failure (Reiner et al., 2014; Pullinger et al., 2015; Sjouke et al., 2016; Maciejko, 2017).

Clinically, LAL-D is under- and misdiagnosed, due to similar clinical and laboratory findings with familial hypercholesterolemia (FH) or nonalcoholic fatty liver disease (NAFLD), leading to a delay in treatment or mistreatment. A correct diagnosis of LAL-D is critical for the appropriate clinical management of children (Pullinger et al., 2015). The standard way of the LAL-D diagnosis is a demonstration of decreased LAL enzyme activity in DBS, serum, or skin fibroblasts. Elevated liver transaminases and elevated serum TC or LDL-C could raise the suspicion of the LAL-D diagnosis (Pullinger et al., 2015; Maciejko, 2017). Most cases are diagnosed in the first two decades of life (Muntoni et al., 2007; Bernstein et al., 2013; Burton et al., 2015). Usage of a human recombinant LAL (sebelipase alpha, Kanuma^®) for the LAL-D treatment was approved in 2015 resulting in significant improvements in the hepatic and lipid profiles of children with LAL-D (Sjouke et al., 2016; Camarena et al., 2017).

The prevalence of the Wolman disease is estimated at approximately 1/350,000, whereas the prevalence of the CESD is estimated between 1/40,000 and 1/300,000, depending on ethnicity and geographic location. However, due to milder phenotypes of the CESD and overlap with other more frequent pathologies, the prevalence might be underestimated (Pullinger et al., 2015; Camarena et al., 2017).

In the study, we assessed the adoption of universal FH screening for early LAL-D detection in preschool children. Furthermore, we evaluated clinical criteria for differentiation between FH and the LAL-D-positive children. Moreover, we presented clinical characteristics of the LAL-D-positive children.

Methods

Cohort Description

Slovenia has been implementing universal FH screening in children since 1995 as a routinely part of the blood checkup at the programmed visit of all 5-year-old children to the primary care pediatrician (Sedej et al., 2014; Klancar et al., 2015; Groselj et al., 2018, 2022), lately reaching more than 90% of 5-year-old children (of approximately 20,000) each year (Supplementary Figure S1). As a part of the universal FH screening program total cholesterol (TC) was measured. In 2011, routine genetic diagnostic for the FH-related genes was introduced at the University Children’s Hospital Ljubljana, Clinical Institute of Special Laboratory Diagnostics (Klancar et al., 2015; Groselj et al., 2018; Marusic et al., 2020). According to the clinical guidelines, additional cascade screening of family members and further clinical care are performed as required and financed by the Slovenia’s national health insurance system.

As the patients with LAL-D also have elevated TC levels, they are detected by our universal FH screening and referred to the Universal Children’s Hospital Ljubljana. Since 2018, in our expended NGS (next-generation sequencing) panel, other genes also associated with dyslipidemia are included. The LIPA gene is also one of those included on the NGS panel. Until recently, 669 children had the LIPA gene sequenced. For the children referred as a part of the FH screening before applying the expended NGS panel (prior 2018), who were negative for the FH-related genes and had elevated aspartate aminotransferase – AST (>0.58 μkat/L) – and/or alanine aminotransferase – ALT levels (>0.74 μkat/L), Sanger sequencing for the LIPA gene was additionally performed. After 2018, all FH screening positive children were with the FH-related genes simultaneously also tested for the pathogenic variants in the LIPA gene. A flowchart of the included children is presented in Supplementary Figure S2.

The principles of the Declaration of Helsinki were followed, and the Slovenian National Medical Ethics Committee approved the study (#25/12/10, #63/07/13, 0120-14/2017/5, 0120-273/2019/9 and 0120-273/2019/19). Written informed consent was obtained from all parents or legal guardians.

Genetic Analyses

Genomic DNA was isolated from the whole blood samples of 669 children using the FlexiGene isolation kit (Qiagen, Germany). Two different sequencing methods for LIPA gene sequencing were used over time: targeted Sanger sequencing (n = 28) and xGen^® Lockdown^® NGS Probes (IDT, United States) (n = 641). Targeted Sanger sequencing was applied for FH-negative children with elevated aspartate aminotransferase – AST (>0.58 μkat/L) – and/or alanine aminotransferase – ALT levels (>0.74 μkat/L), and for the cascade LAL-D screening of the positive siblings. With the usage of the NGS probes, the LIPA gene was included in our expanded dyslipidemia gene panel. Samples were sequenced on the MiSeq sequencer with MiSeq Reagent Kit (Illumina, United States) following the manufacturer’s instructions including recommendations for quality control parameters. All variants identified with NGS sequencing were reconfirmed by targeted Sanger DNA sequencing. The pathogenicity of the identified variants was assessed using Human Gene Mutation Database Professional and ClinVar (Landrum et al., 2018) databases. For variants of unknown clinical significance in silico prediction tools (CADD, SIFT, MutationTaster, PolyPhen2) were utilized (Ng and Henikoff, 2003; Schwarz et al., 2010; Adzhubei et al., 2013; Rentzsch et al., 2019). Variants were classified according to the American College for Medical Genetics and Genomics (ACMG) classification criteria (Richards et al., 2015).

Laboratory Findings, Medical Imaging and Pathology Evaluation

Lipid profiles [TC, LDL-C, HDL-C, and triglycerides (TG)] for all the included children were routinely measured with an automated analyzer Advia 1800 (Siemens Healthcare, Erlangen, Germany), using the direct enzymatic colorimetric method. Additionally, transaminase [AST, ALT, and amma-glutamyl transferase (GGT)] levels were measured. South Glasgow Hospital performed acid lipase enzyme assays for the LAL-D-positive children with a pathogenic variant in the LIPA gene. Liver MRI elastography and liver ultrasound were performed in the LAL-D-positive children. In two patients, liver biopsy was also performed before considering treatment with sebelipase alpha (Kanuma^®).

Arterial Stiffness and Endothelial Function Evaluation

The ultrasound examination was performed using the Aloka 5500 SSD Pro-sound ultrasound machine. The UST-5539 7.5 linear probe was used for vascular examination, and the auto-IMT modality of ultrasound machine software was used. The maximum cIMT value, expressed in millimeters, was used for analysis and determined as the mean of all six measurements performed bilaterally. Using a high-definition echo-tracking system (Aloka implemented E-tracking software) the pressure–diameter curve of the artery was derived and from the time delay between the two adjacent distension waveforms, one-point local pulse wave velocity and beta stiffness was calculated.

The endothelial function measurement was performed on the peripheral arterial tone using the EndoPAT 2000 device (Itamar Medical Ltd., Caesarea, Israel); the reactive hyperemia index (RHI) was calculated using the manufacturer’s algorithm based on the ratios between pulse wave amplitudes during the reactive hyperemia and baseline phases.

Prevalence Estimation of Heterozygous LIPA Variants in the General Population

The prevalence of LAL-D in the Slovenian population was determined based on the cohort who did not express FH phenotype (n = 1,915). The number of heterozygous carriers of the pathogenic alleles in the LIPA gene was determined, and the prevalence of homozygous LAL-D in our population was then calculated with the Hardy–Weinberg equation.

Results

LAL-D-Positive Children Diagnosis

To date, 669 children (demographical data of the cohort is presented in Table 1) were included in the LIPA gene analysis. 664 of them were referred to our clinic because of elevated cholesterol levels found at the universal FH screening in children program in Slovenia; four children were referred as symptomatic for LAL-D and one as a part of a sibling-cascade LAL-D screening. Due to the FH screening program, the median age at the first appointment at our institution was 6.3 (IQR: 5.8–7.2) years.

TABLE 1

TABLE 1. Demographical data of the children included in the study.

Of all the 669 children analyzed for the LIPA and FH-related genes (APOB, LDLR, and PCSK9), 189 were classified as positive or with a variant of uncertain significance (VUS) for the FH-related genes. From the remaining group of 480 children, three were classified as LAL-D-positive. All of them were homozygous for NM_000235.4:c.894G > A variant in the LIPA gene (NG_008194.1) resulting in NP_000226.2:p. Gln298Gln (rs116928232) synonymous protein variant affecting the splice site at the end of exon 8. According to the ACMG criteria, the variant was classified as pathogenic (PP5, PP3, PP1, and PM2) (Richards et al., 2015). Two children were detected directly based on the universal FH screening program and one based on the cascade LAL-D screening of siblings. None of the children who were referred as symptomatic for LAL-D (with elevated aminotransferase levels) was positive for a pathogenic variant in the LIPA gene. The mean age of the diagnosis was 9.8 ± 0.9 years. Demographical and clinical characteristics of the LAL-D-positive children are presented in Table 2. There was no evidence of consanguineous marriage in the family.

TABLE 2

TABLE 2. Demographical and clinical characteristics of the LAL-D positive patients.

In all three LAL-D positive children, the enzyme activity of LAL performed from a sample of dried blood spot showed a decreased activity of under 0.02 nmol/punch/hour (reference range: 0.37–2.30 nmol/punch/hour). In patient 3, a liver biopsy was performed before the genetic result was available and showed small droplet steatosis in hepatocytes and rarely captured macrophages. A mildly multiplied and condensed connective tissue in the portal field, in the sinusoids and segmentally in the bile ducts and between hepatocytes, was present. No cholesterol needles were found. Also, a liver biopsy was performed in patient 1 before consideration for the Kanuma treatment, but a milder phenotype was present, and patient 1 was not eligible for the treatment.

Clinical Follow-Up of the LAL-D-Positive Children

When comparing TC, LDL-C, HDL-C, TG, AST, and ALT levels of the FH screening positive children and the LAL-D-positive children, increase in TC and LDL-C levels can be observed in LAL-D-positive children versus the median of the FH screening positive children group (Figure 1) at their first visit at our clinic. Moreover, all three LAL-D-positive children had an important elevation of transaminases.

FIGURE 1

FIGURE 1. Lipoprotein and transaminase levels of the LAL-D positive children compared to the LAL-D negative cohort. Distribution of (A) total cholesterol, (B) low-density lipoprotein cholesterol, (C) high-density lipoprotein cholesterol, (D) triglycerides, (E) aspartate transaminase, and (F) alanine transaminase for LAL-D negative population. The vertical dotted lines show the values of each parameter for the LAL-D-positive patients. LDL-C: low-density lipoprotein cholesterol; TC: total cholesterol; HDL-C: high-density lipoprotein cholesterol; TG: triglycerides; AST: aspartate transaminase; ALT: alanine transaminase.

Before treatment, the mean height percentile of the children was 14.3 ± 5.7, and the mean BMI percentile was 30.4 ± 16.7. The children were not malnourished, but an improvement was seen in the height and BMI percentiles after treatment initiation. The mean percentile of height after treatment was 22.6 ± 3.2, and the mean BMI percentile was 45.9 ± 10.6. Ezetimibe (10 mg) was administered to all three children in the initial phase (Figure 2).

FIGURE 2

FIGURE 2. Lipoprotein and transaminase levels of the LAL-D positive children over time. Distribution of (A) total cholesterol, (B) low-density lipoprotein cholesterol, (C) high-density lipoprotein cholesterol, (D) triglycerides, (E) aspartate transaminase, and (F) alanine transaminase for LAL-D-positive population over time. Dotted vertical lines represent the beginning of the treatment and treatment modification for each patient. All three patients were treated with ezetimibe (10 mg). Furthermore, patient 3 was treated with a combination of ezetimibe (10 mg) and Kanuma® and patient 1 was treated with a combination of ezetimibe (10 mg) and rosuvastatin (10 mg) from the age of 16, but the combination therapy was discontinued because of fatigue. LDL-C: low-density lipoprotein cholesterol; TC: total cholesterol; HDL-C: high-density lipoprotein cholesterol; TG: triglycerides; AST: aspartate transaminase; ALT: alanine transaminase; E: Ezetimibe (10 mg), K: Kanuma (40 mg), R: Rosuvastatin (10 mg).

At age 10.4, patient 3 started receiving combination therapy with ezetimibe (10 mg) and Kanuma^® (1 mg/kg, every 2 weeks) in a clinical trial abroad. In 2017/2018, there was an interruption for 8 months with Kanuma^®, because of organizing the therapy at a home institution, after discontinuing his treatment abroad. For patient 3, we noticed a decrease in TC, LDL-C, AST, ALT, and yGT levels on ezetimibe treatment alone, but a more important decrease is seen when Kanuma was added to the therapy, as seen in Supplementary Table S1. At age 16.8 in patient 1, no sufficient lowering of cholesterol and liver enzymes with ezetimibe was present at first and was not applicable for the Kanuma treatment, started with a combination of ezetimibe (10 mg) and rosuvastatin (10 mg). Moreover, the patient already had signs of endothelial dysfunction. We concluded that statins would be more beneficial to the patient because of persistently elevated cholesterol levels, but the patient had side effects (muscle pain and fatigue), and rosuvastatin was discontinued.

The levels of TC, LDL-C, HDL-C, TG, AST, and ALT levels in all three LAL-D children over time are presented in Figure 2. Vertical lines indicate therapy initiation and modification dates for all three children. Before the treatment, the mean AST and ALT levels were 1.33 ± 0.25 μkat/L and 1.61 ± 0.15 μkat/L, respectively. After treatment initiation, a decrease in the mean AST (0.73 ± 0.11 μkat/L) and ALT (1.13 ± 0.23 μkat/L) levels were observed. In the lipid profile after treatment, more favorable mean levels were present. The mean levels of TC (6.46 ± 0.95 mmol/L), LDL (4.34 ± 0.54 mmol/L), and triglycerides (1.44 ± 0.66 mmol/L) before treatment were higher than the mean TC (5.25 ± 0.40 mmol/L), LDL (3.38 ± 0.56 mmol/L), and triglycerides (1.16 ± 0.41 mmol/L) on treatment. Furthermore, HDL (1.29 ± 0.25 mmol/L) before treatment has increased on treatment (1.37 ± 0.33 mmol/L).

Chitotriosidase levels before treatment are only available in patient 2; the value was 408 nmol/mLh (reference range: 3–65 nmol/mLh). Comparing the first half (earlier period) of treatment with the second half (last period) of treatment in patients 2 and 3, we can see a decrease in chitotriosidase levels (from 426 ± 148 nmol/mLh to 300 ± 159 nmol/mLh in patient 2 and from 578 ± 197 nmol/mLh to 388 ± 57 nmol/mLh in patient three). In patient 1, the chitotriosidase levels were elevated in the second half of treatment; the values went from 654 ± 209 nmol/mLh to 682 ± 239 nmol/mLh.

Liver MRI in all children detected an enlarged liver but a normal-sized spleen. Mild fibrosis and steatosis of the liver in patients 1 and 2 were observed on MRI liver elastography, and in patient 3, high fibrosis in regions five and six has been present. The size of the liver in child 1 at 12.3 years was in the midclavicular plane in the craniocaudal line 159 mm and transverse line 185 mm. The degree of steatosis was 18%-19%. In the control after 4.5 years, the degree of steatosis was 10.2%. The size of the liver in patient 2 at 9.8 years was in the midclavicular plane in the craniocaudal line at 122 mm and transverse line at 190 mm, and the degree of steatosis was 16%-17%. In the control after 2.5 years, the degree of steatosis was 11%. The size of the liver in patient 3 at 10.2 years was in the midclavicular plane in the craniocaudal line at 148 mm and transverse line at 184 mm, and the degree of steatosis was 10%. In the control after 6.5 years, the degree of steatosis was 7%–10%. In all children, the spleen structure was normal on MRI elastography.

The mean cIMT was 0.353 ± 0.08 mm. By the references according to Drole Torkar et al. (2020), in patient 2, cIMT was between 25. and 50. p, and in the other two patients, it was under 5. p. The mean beta stiffness was 3.5 ± 0.5. By the references according to Doyon et al. (2013), patient 1 and patient 2 had beta stiffness above 50. p, and patient 3 under 50. p. The mean RHI was 1.38 ± 0.38. Using the threshold 1.35, suggested by Bonetti et al. (2004) classified patient 1 as having already endothelial disfunction, while patients 2 and 3 had a normal endothelial function. The mean PWV was 3.94 ± 0.46 m/s. By the references according to Reusz et al. (2010), patient 1 had PWV under the 5. p, and patients 1 and 2 were classified between 10. and 50. p.

LAL-D Prevalence Estimation

The LAL-D prevalence in our population based on the data of heterozygous carriers of the pathogenic alleles in the LIPA gene was estimated at 1/406,193.

Discussion

In the present study, we indicated the importance of the FH screening for the detection of dyslipidemia clinically expressed similarly to FH. As a result of having unspecific symptoms, LAL-D is diagnosed late in life, misdiagnosed, or overlooked. However, we aimed to distinguish between the phenotype of the children with FH and children with a LIPA disease-causing variant in our cohort. Furthermore, the prevalence of LAL-D in our population was estimated.

Cascade FH screening was successfully implemented in the Netherlands (Wiegman et al., 2015). Furthermore, as a great advantage of the universal hypercholesterolemia screening in preschool children (Groselj et al., 2018), in the absence of other FH monogenic or polygenic factors, simultaneously other dyslipidaemias could be detected. Moreover, LAL-D screening should be considered for children and young adults with unexplained hepatic elevated AST/ALT levels in combination with elevated LDL-C (>160 mg/dl, 4.1 mmol/L) and low HDL-C levels (<35 mg/dl, 1.0 mmol/L). Also, by universal FH screening, the LAL-D positive children are diagnosed, and appropriate treatment at an early age before the onset of serious clinical signs and disease progression is introduced (Strebinger et al., 2019). Another aim of early treatment is also the prevention of potential later cardiovascular complications as in one of our three children endothelial dysfunction was probably already present, considering that the RHI value was below the RHI cut-off value for adults (1.35) and lower RHI seen in the children from the same age group (Kelly et al., 2014).

All three children were homozygous for a pathogenic NM_000235.4: c.894G > A variant in the LIPA gene (NG_008194.1), which was previously functionally characterized as affecting a 5′ splice-region causing deletion of a 72-base exon 8 (p.Ser275_Gln298del) from the mRNA for LAL causing CESD letting 5%–10% of the wildtype activity (Klima et al., 1993; Ameis et al., 1995; Fasano et al., 2012). The presence of the c.894G > A variant is associated with a milder clinical phenotype of LAL-D with slow progression of liver fibrosis and cirrhosis (Lipiński et al., 2018). Rashu et al. (2020) describe two adult LIPA compound heterozygous siblings for the c.894G > A and c.482del variants and Gürbüz et al. (2020) report a 14-year-old and 3-year-old siblings with homozygous c.894G > A variant with persisting gastrointestinal symptoms (hepatosplenomegaly, malabsorption, and diarrhea, combined with elevated transaminases and dyslipidemia). A Columbian boy was confirmed with LAL-D with the c.893G > A variant in the LIPA gene at age 14 after isolated hepatomegaly and dyslipidemia at age 6 were detected (Botero et al., 2018).

LAL-D is an autosomal recessive disease since it has been demonstrated that heterozygous LIPA disease-causing carriers generally do not express an FH phenotype, while FH is a disease with an autosomal dominant inheritance pattern (Sjouke et al., 2016). The prevalence of LAL-D was previously estimated to be 1/40,000 to 1/300,000 individuals (Pullinger et al., 2015; Camarena et al., 2017). Based on the cohort of 1,915 children from our population the prevalence of homozygous LAL-D was estimated to be 1/1/406,193. Since we only considered pathogenic variants for the genetic computation of prevalence, rather than VUS, the prevalence in our population was slightly lower than expected compared to the literature.

Due to the unspecific symptoms, LAL-D is typically diagnosed late in life, misdiagnosed, or overlooked (Strebinger et al., 2019). In CESD, deaths because of liver disease progression have been reported already at the age of 7 years (Bernstein et al., 2013). Typically, children with LAL-D have elevated cholesterol levels, whereas the parents of the index case have normal lipid profiles (Sjouke et al., 2016). An important indicator for diagnosing children with LAL-D is significantly elevated transaminase levels, which is a sensitive and specific way of detecting this disorder. However, as screening for FH with cholesterol is already implemented in Slovenia, measuring TC levels at the first step and liver enzymes at the specialist clinic was more feasible. Although LAL-D should still be considered a differential diagnosis in children with increased liver enzymes or other clinical signs indicative of LAL-D. Moreover, LAL-D newborn screening (NBS) should be considered in the future (Remec et al., 2021); nevertheless, LAL-D currently is not screened in Europe and elsewhere by NBS (Loeber et al., 2021).

Moreover, statin therapy reduces LDL-C levels, but on the other hand, they promote the delivery of cholesteryl esters to hepatocytes and consequently worsens the effects on liver function (Pullinger et al., 2015; Sjouke et al., 2016). Liver transplantation has not been proven as a successful treatment option for LAL-D. Bernstein et al. (2013) reported that 11 out of 18 LAL-D children had multisystemic progression of the disease (for example, growth failure, anemia, sepsis, transplant rejection, right lower lobe collapse, atelectasis, pulmonary lipid deposition, dyslipidemia, atherosclerosis, and heart failure). Hematopoietic stem cell transplantation seems to be a more successful treatment in Wolman disease than liver transplantation, but there are also reports about disease progression and fatal transplant-related complications (Strebinger et al., 2019).

The use of a human recombinant LAL (sebelipase alpha, Kanuma^®) for the LAL-D treatment was approved in 2015, not only resulting in significant improvements in the hepatic and lipid profiles of children with LAL-D but also increased survival rates in infants with Wolman disease (Sjouke et al., 2016; Camarena et al., 2017). In the results of the ARISE study, improvements in liver enzymes and lipid profile were seen with the Kanuma^® treatment. At the last open-label assessment, ALT and AST normalization were achieved by 47% and 66% of children, respectively. A 25% reduction in median (IQR) percent changes in LDL-C and a 27% (19%, 44%) increase in high-density lipoprotein cholesterol in the median (IQR) percent changes were observed (Burton et al., 2022). In 13 children who experienced an infusion-associated reaction, one was categorized as serious; the others were mild to moderate. Antidrug antibodies were found in 6 children in the middle of treatment, but in the end, 5 out of 6 children tested antidrug antibody negative, and the only one that was still positive was the patient that had developed activity-neutralizing antibodies (Burton et al., 2022). Although in 2017 in the National Institute for Health and Care Excellence (NICE) guidelines Kanuma^® was not recommended for long-term enzyme replacement therapy for treating LAL-D in babies with rapidly progressive disease and also not in children and adults (National Institute for Health and Care Excellence, 2017) since 2021 NICE is proceeding with a new Highly Specialised Technologies Evaluation for sebelipase (National Institute for Health and Care Excellence, 2021). In all three children from our study, an improvement in cholesterol levels, liver enzymes, and also of steatosis of the liver has been seen after early treatment initiation.

In 2020, consensus recommendations from an international collaborative working group were published on the initial assessment and ongoing monitoring of LAL-D in children and adults (Kohli et al., 2020). International guidelines on the treatment of LAL-D are lacking. In 2012 (recruiting is still in progress), an international registry was started to improve the understanding of therapeutic interventions and their long-term effectiveness (Soll et al., 2019).

One of the present study’s important limitations was a delay in diagnosing LAL-D when compared to age at FH screening. As a part of the universal FH screening, TC levels at the primary-care level were measured at age 5-6, and the median age by the referral to our institution was 6.3 (IQR: 5.8–7.2) years. Before an expanded NGS panel for dyslipidemia containing the LIPA gene was established, genetic testing was first performed to exclude FH, and therefore, genetic testing for LAL-D was performed later. After 2018, LIPA sequencing is performed on all FH screening positive children. Therefore, we do not anticipate any further delays in the future detection of the pathogenic variants in the LIPA gene.

In conclusion, our results show that universal FH screening in children is effective also for simultaneous identification of children with other rare dyslipidemia manifesting with hypercholesterolemia (such as LAL-D), as secondary screening conditions. An important clinical criterion for differentiation between FH and the LAL-D positive children was shown to be elevated levels of transaminases (ALT and AST). Early detection and treatment of children with LAL-D are important to prevent long-term consequences.

Data Availability Statement

The datasets presented in this study can be found in online repositories. The name of the repository and link to the data can be found: Mendeley; https://data.mendeley.com/datasets/zn7b85hgk6/1.

Ethics Statement

The studies involving human participants were reviewed and approved by the Slovenian National Medical Ethics Committee. Written informed consent to participate in this study was provided by the participants’ legal guardian/next of kin. Written informed consent was obtained from the minor(s)’ legal guardian/next of kin for the publication of any potentially identifiable images or data included in this article.

Author Contributions

UG and TH, the corresponding author, had full access to all the data and took responsibility for the integrity of the data and the accuracy of the data analysis. US, MM, KT, TB, and TH contributed to the study concept and design, contributed data, and advised on the analysis or interpretation of the data. US, MM, TH, and UG wrote the first draft of the manuscript. KT, JK, AD, MT, AS, and TB commented on and revised the manuscript and approved the submission.

Funding

The study was funded by the Slovenian Research Agency Program (P3-0343) and Project (J3-2536).

Conflict of Interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Publisher’s Note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations or those of the publisher, the editors, and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

Acknowledgments

We would like to acknowledge Jane McNeilly and John Hamilton for performing acid lipase enzyme assays in South Glasgow Hospital. We would also like to acknowledge Danijela Petković Ramadža and Ivo Barić for treating our patients at the Department of Paediatrics, University Hospital Center Zagreb. Also, we would like to acknowledge Jernej Brecelj as the consultant pediatric hepatologist.

Supplementary Material

The Supplementary Material for this article can be found online at https://www.frontiersin.org/articles/10.3389/fgene.2022.936121/full#supplementary-material

References

Adzhubei, I., Jordan, D. M., and Sunyaev, S. R. (2013). Predicting Functional Effect of Human Missense Mutations Using PolyPhen‐2. Curr. Protoc. Hum. Genet. Chapter 7, Unit7.20. doi:10.1002/0471142905.hg0720s76

CrossRef Full Text | Google Scholar

Ameis, D., Brockmann, G., Knoblich, R., Merkel, M., Ostlund, R. E., Yang, J. W., et al. (1995). A 5' Splice-Region Mutation and a Dinucleotide Deletion in the Lysosomal Acid Lipase Gene in Two Patients with Cholesteryl Ester Storage Disease. J. Lipid Res. 36, 241–250. doi:10.1016/s0022-2275(20)39900-4

PubMed Abstract | CrossRef Full Text | Google Scholar

Bernstein, D. L., Hülkova, H., Bialer, M. G., and Desnick, R. J. (2013). Cholesteryl Ester Storage Disease: Review of the Findings in 135 Reported Patients with an Underdiagnosed Disease. J. Hepatology 58, 1230–1243. doi:10.1016/j.jhep.2013.02.014

CrossRef Full Text | Google Scholar

Bonetti, P. O., Pumper, G. M., Higano, S. T., Holmes, D. R., Kuvin, J. T., and Lerman, A. (2004). Noninvasive Identification of Patients with Early Coronary Atherosclerosis by Assessment of Digital Reactive Hyperemia. J. Am. Coll. Cardiol. 44, 2137–2141. doi:10.1016/j.jacc.2004.08.062

PubMed Abstract | CrossRef Full Text | Google Scholar

Botero, V., Garcia, V. H., Gomez-Duarte, C., Aristizabal, A. M., Arrunategui, A. M., Echeverri, G. J., et al. (2018). Lysosomal Acid Lipase Deficiency, a Rare Pathology: The First Pediatric Patient Reported in Colombia. Am. J. Case Rep. 19, 669–672. doi:10.12659/AJCR.908808

PubMed Abstract | CrossRef Full Text | Google Scholar

Burton, B. K., Deegan, P. B., Enns, G. M., Guardamagna, O., Horslen, S., Hovingh, G. K., et al. (2015). Clinical Features of Lysosomal Acid Lipase Deficiency. J. Pediatr. Gastroenterology Nutr. 61, 619–625. doi:10.1097/MPG.0000000000000935

PubMed Abstract | CrossRef Full Text | Google Scholar

Burton, B. K., Feillet, F., Furuya, K. N., Marulkar, S., and Balwani, M. (2022). Sebelipase Alfa in Children and Adults with Lysosomal Acid Lipase Deficiency: Final Results of the ARISE Study. J. Hepatology 76, 577–587. doi:10.1016/j.jhep.2021.10.026

CrossRef Full Text | Google Scholar

Camarena, C., Aldamiz-Echevarria, L. J., Polo, B., Barba Romero, M. A., García, I., Cebolla, J. J., et al. (2017). Actualización en deficiencia de lipasa ácida lisosomal: diagnóstico, tratamiento y seguimiento de los pacientes. Med. Clínica 148, 429.e1–429.e10. doi:10.1016/j.medcli.2016.12.044

CrossRef Full Text | Google Scholar

Doyon, A., Kracht, D., Bayazit, A. K., Deveci, M., Duzova, A., Krmar, R. T., et al. (2013). Carotid Artery Intima-Media Thickness and Distensibility in Children and Adolescents. Hypertension 62, 550–556. doi:10.1161/HYPERTENSIONAHA.113.01297

PubMed Abstract | CrossRef Full Text | Google Scholar

Drole Torkar, A., Plesnik, E., Groselj, U., Battelino, T., and Kotnik, P. (2020). Carotid Intima-Media Thickness in Healthy Children and Adolescents: Normative Data and Systematic Literature Review. Front. Cardiovasc. Med. 7, 597768. doi:10.3389/fcvm.2020.597768

PubMed Abstract | CrossRef Full Text | Google Scholar

Fasano, T., Pisciotta, L., Bocchi, L., Guardamagna, O., Assandro, P., Rabacchi, C., et al. (2012). Lysosomal Lipase Deficiency: Molecular Characterization of Eleven Patients with Wolman or Cholesteryl Ester Storage Disease. Mol. Genet. Metabolism 105, 450–456. doi:10.1016/j.ymgme.2011.12.008

PubMed Abstract | CrossRef Full Text | Google Scholar

Groselj, U., Kovac, J., Sustar, U., Mlinaric, M., Fras, Z., Podkrajsek, K. T., et al. (2018). Universal Screening for Familial Hypercholesterolemia in Children: The Slovenian Model and Literature Review. Atherosclerosis 277, 383–391. doi:10.1016/j.atherosclerosis.2018.06.858

PubMed Abstract | CrossRef Full Text | Google Scholar

Groselj, U., Wiegman, A., and Gidding, S. S. (2022). Screening in Children for Familial Hypercholesterolaemia: Start Now. Eur. Heart J. ehac224. doi:10.1093/eurheartj/ehac224

CrossRef Full Text | Google Scholar

Gürbüz, B. B., Güney, İ., Bulut, F. D., and Dilek, O. (2020). A Rare Cause of Hepatomegaly and Dyslipidemia: Lysosomal Acid Lipase Deficiency. TurkJPediatr 62, 831–835. doi:10.24953/turkjped.2020.05.016

CrossRef Full Text | Google Scholar

Kelly, A. S., Marlatt, K. L., Steinberger, J., and Dengel, D. R. (2014). Younger Age Is Associated with Lower Reactive Hyperemic Index but Not Lower Flow-Mediated Dilation Among Children and Adolescents. Atherosclerosis 234, 410–414. doi:10.1016/j.atherosclerosis.2014.03.031

PubMed Abstract | CrossRef Full Text | Google Scholar

Klančar, G., Grošelj, U., Kovač, J., Bratanič, N., Bratina, N., Trebušak Podkrajšek, K., et al. (2015). Universal Screening for Familial Hypercholesterolemia in Children. J. Am. Coll. Cardiol. 66, 1250–1257. doi:10.1016/j.jacc.2015.07.017

PubMed Abstract | CrossRef Full Text | Google Scholar

Klima, H., Ullrich, K., Aslanidis, C., Fehringer, P., Lackner, K. J., and Schmitz, G. (1993). A Splice Junction Mutation Causes Deletion of a 72-base Exon from the mRNA for Lysosomal Acid Lipase in a Patient with Cholesteryl Ester Storage Disease. J. Clin. Invest. 92, 2713–2718. doi:10.1172/JCI116888

PubMed Abstract | CrossRef Full Text | Google Scholar

Kohli, R., Ratziu, V., Fiel, M. I., Waldmann, E., Wilson, D. P., and Balwani, M. (2020). Initial Assessment and Ongoing Monitoring of Lysosomal Acid Lipase Deficiency in Children and Adults: Consensus Recommendations from an International Collaborative Working Group. Mol. Genet. Metabolism 129, 59–66. doi:10.1016/j.ymgme.2019.11.004

PubMed Abstract | CrossRef Full Text | Google Scholar

Landrum, M. J., Lee, J. M., Benson, M., Brown, G. R., Chao, C., Chitipiralla, S., et al. (2018). ClinVar: Improving Access to Variant Interpretations and Supporting Evidence. Nucleic Acids Res. 46, D1062–D1067. doi:10.1093/nar/gkx1153

PubMed Abstract | CrossRef Full Text | Google Scholar

Lipiński, P., Ługowska, A., Zakharova, E. Y., Socha, P., and Tylki-Szymańska, A. (2018). Diagnostic Algorithm for Cholesteryl Ester Storage Disease: Clinical Presentation in 19 Polish Patients. J. Pediatr. Gastroenterology Nutr. 67, 452–457. doi:10.1097/MPG.0000000000002084

CrossRef Full Text | Google Scholar

Loeber, J. G., Platis, D., Zetterström, R. H., Almashanu, S., Boemer, F., Bonham, J. R., et al. (2021). Neonatal Screening in Europe Revisited: An ISNS Perspective on the Current State and Developments since 2010. Ijns 7, 15. doi:10.3390/ijns7010015

CrossRef Full Text | Google Scholar

Maciejko, J. J. (2017). Managing Cardiovascular Risk in Lysosomal Acid Lipase Deficiency. Am. J. Cardiovasc Drugs 17, 217–231. doi:10.1007/s40256-017-0216-5

PubMed Abstract | CrossRef Full Text | Google Scholar

Marusic, T., Sustar, U., Sadiq, F., Kotori, V., Mlinaric, M., Kovac, J., et al. (2020). Genetic and Clinical Characteristics of Patients with Homozygous and Compound Heterozygous Familial Hypercholesterolemia from Three Different Populations: Case Series. Front. Genet. 11. doi:10.3389/fgene.2020.572176

CrossRef Full Text | Google Scholar

Muntoni, S., Wiebusch, H., Jansen-Rust, M., Rust, S., Seedorf, U., Schulte, H., et al. (2007). Prevalence of Cholesteryl Ester Storage Disease. Atvb 27, 1866–1868. doi:10.1161/ATVBAHA.107.146639

PubMed Abstract | CrossRef Full Text | Google Scholar

National Institute for Health and Care Excellence (2021). Lysosomal Acid Lipase Deficiency - Sebelipase Alfa [ID737]. Available at: https://www.nice.org.uk/guidance/indevelopment/gid-lysosomalacidlipasedeficiencysebelipasealfaid737 (Accessed April 5, 2022).

Google Scholar

National Institute for Health and Care Excellence (2017). Sebelipase Alfa for Treating Lysosomal Acid Lipase Deficiency. Available at: https://www.nice.org.uk/guidance/gid-lysosomalacidlipasedeficiencysebelipasealfaid737/documents/final-evaluation-determination-document (Accessed April 5, 2022).

Google Scholar

Ng, P. C., and Henikoff, S. (2003). SIFT: Predicting Amino Acid Changes that Affect Protein Function. Nucleic Acids Res. 31, 3812–3814. doi:10.1093/nar/gkg509

PubMed Abstract | CrossRef Full Text | Google Scholar

Pisciotta, L., Tozzi, G., Travaglini, L., Taurisano, R., Lucchi, T., Indolfi, G., et al. (2017). Molecular and Clinical Characterization of a Series of Patients with Childhood-Onset Lysosomal Acid Lipase Deficiency. Retrospective Investigations, Follow-Up and Detection of Two Novel LIPA Pathogenic Variants. Atherosclerosis 265, 124–132. doi:10.1016/j.atherosclerosis.2017.08.021

PubMed Abstract | CrossRef Full Text | Google Scholar

Pullinger, C. R., Stock, E. O., Movsesyan, I., Malloy, M. J., Frost, P. H., Tripuraneni, R., et al. (2015). Identification and Metabolic Profiling of Patients with Lysosomal Acid Lipase Deficiency. J. Clin. Lipidol. 9, 716–726. doi:10.1016/j.jacl.2015.07.008

PubMed Abstract | CrossRef Full Text | Google Scholar

Rashu, E. B., Junker, A. E., Danielsen, K. V., Dahl, E., Hamberg, O., Borgwardt, L., et al. (2020). Cholesteryl Ester Storage Disease of Clinical and Genetic Characterisation: A Case Report and Review of Literature. Wjcc 8, 1642–1650. doi:10.12998/WJCC.V8.I9.1642

PubMed Abstract | CrossRef Full Text | Google Scholar

Reiner, Ž., Guardamagna, O., Nair, D., Soran, H., Hovingh, K., Bertolini, S., et al. (2014). Lysosomal Acid Lipase Deficiency - an Under-recognized Cause of Dyslipidaemia and Liver Dysfunction. Atherosclerosis 235, 21–30. doi:10.1016/j.atherosclerosis.2014.04.003

PubMed Abstract | CrossRef Full Text | Google Scholar

Remec, Z. I., Trebusak Podkrajsek, K., Repic Lampret, B., Kovac, J., Groselj, U., Tesovnik, T., et al. (2021). Next-Generation Sequencing in Newborn Screening: A Review of Current State. Front. Genet. 12, 662254. doi:10.3389/fgene.2021.662254

PubMed Abstract | CrossRef Full Text | Google Scholar

Rentzsch, P., Witten, D., Cooper, G. M., Shendure, J., and Kircher, M. (2019). CADD: Predicting the Deleteriousness of Variants throughout the Human Genome. Nucleic Acids Res. 47, D886–D894. doi:10.1093/nar/gky1016

PubMed Abstract | CrossRef Full Text | Google Scholar

Reusz, G. S., Cseprekal, O., Temmar, M., Kis, E., Cherif, A. B., Thaleb, A., et al. (2010). Reference Values of Pulse Wave Velocity in Healthy Children and Teenagers. Hypertension 56, 217–224. doi:10.1161/HYPERTENSIONAHA.110.152686

PubMed Abstract | CrossRef Full Text | Google Scholar

Richards, S., Aziz, N., Bale, S., Bick, D., Das, S., Gastier-Foster, J., et al. (2015). Standards and Guidelines for the Interpretation of Sequence Variants: A Joint Consensus Recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet. Med. 17, 405–424. doi:10.1038/gim.2015.30

PubMed Abstract | CrossRef Full Text | Google Scholar

Schwarz, J. M., Rödelsperger, C., Schuelke, M., and Seelow, D. (2010). MutationTaster Evaluates Disease-Causing Potential of Sequence Alterations. Nat. Methods 7, 575–576. doi:10.1038/nmeth0810-575

CrossRef Full Text | Google Scholar

Sedej, K., Kotnik, P., Avbelj Stefanija, M., Grošelj, U., Širca Čampa, A., Lusa, L., et al. (2014). Decreased Prevalence of Hypercholesterolaemia and Stabilisation of Obesity Trends in 5-Year-Old Children: Possible Effects of Changed Public Health Policies. Eur. J. Endocrinol. 170, 293–300. doi:10.1530/EJE-13-0566

PubMed Abstract | CrossRef Full Text | Google Scholar

Sjouke, B., Defesche, J. C., de Randamie, J. S. E., Wiegman, A., Fouchier, S. W., and Hovingh, G. K. (2016). Sequencing for LIPA Mutations in Patients with a Clinical Diagnosis of Familial Hypercholesterolemia. Atherosclerosis 251, 263–265. doi:10.1016/j.atherosclerosis.2016.07.008

PubMed Abstract | CrossRef Full Text | Google Scholar

Soll, D., Spira, D., Hollstein, T., Haberbosch, L., Demuth, I., Steinhagen-Thiessen, E., et al. (2019). Clinical Outcome of a Patient with Lysosomal Acid Lipase Deficiency and First Results after Initiation of Treatment with Sebelipase Alfa: A Case Report. Mol. Genet. Metabolism Rep. 20, 100479. doi:10.1016/j.ymgmr.2019.100479

PubMed Abstract | CrossRef Full Text | Google Scholar

Strebinger, G., Müller, E., Feldman, A., and Aigner, E. (2019). Lysosomal Acid Lipase Deficiency - Early Diagnosis Is the Key. Hmer 11, 79–88. doi:10.2147/hmer.s201630

CrossRef Full Text | Google Scholar

Wiegman, A., Gidding, S. S., Watts, G. F., Chapman, M. J., Ginsberg, H. N., Cuchel, M., et al. (2015). Familial Hypercholesterolaemia in Children and Adolescents: Gaining Decades of Life by Optimizing Detection and Treatment. Eur. Heart J. 36, 2425–2437. doi:10.1093/eurheartj/ehv157

PubMed Abstract | CrossRef Full Text | Google Scholar

Wilson, D. P., and Patni, N. (2020). “Lysosomal Acid Lipase Deficiency,” in Endotext. Editor A. Boyce, G. Chrousos, B. Anawalt, W. W. de Herder, K. Dharariya, and K. Dungan (South Dartmouth (MA): MD: Text.com). [Internet]

Google Scholar