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REVIEW article

Front. Ecol. Evol., 07 February 2020
Sec. Population, Community, and Ecosystem Dynamics
This article is part of the Research Topic Death and Decomposition in Aquatic Ecosystems View all 11 articles

Death and Decomposition in Aquatic Ecosystems

  • 1Department of Entomology, College of Agriculture and Natural Resources, Michigan State University, East Lansing, MI, United States
  • 2Department of Osteopathic Medical Specialties, Michigan State University, East Lansing, MI, United States
  • 3Ecology, Evolutionary Biology and Behavior Program, Michigan State University, East Lansing, MI, United States
  • 4Department of Biological Sciences, College of Science, University of Notre Dame, Notre Dame, IN, United States

Resource subsidies affect nutrient cycling, species interactions, and food webs in ways that influence ecosystem structure and function, but their effects depend on the history, magnitude, and recurrence frequency of the subsidies. In aquatic ecosystems, plant detritus has been considered the predominant form of such subsidies; however, while considered less abundant in many ecosystems, carrion represents subsidies with relatively rapid turnover and highly concentrated nutrient and energy release that can have strong and lasting effects on ecosystems. Carrion subsidies can be both autochthonous or allochthonous, and come in the form of natural senescence or disease-related non-consumptive mortality, phenology-based programed death (e.g., salmon spawning and death), or stochastic and episodic events (e.g., mass fish die-offs). All aquatic ecosystems have some level of non-consumptive mortality that provides a background level of carcasses to aquatic ecosystems, while others have a natural history of carrion resource subsidies (e.g., natural salmon-bearing streams), and some have only recently been exposed to phenology-based carrion subsidies (e.g., anthropogenic salmon introductions around the world). Many aquatic ecosystems experience episodic subsidies in the form of unexpected mass mortalities (e.g., eutrophication-, disease-, or climate-related mass die-offs) or have seasonally dependent pulses, like that of marine or lake snow in the form of zooplankton carcasses. The responses of ecosystems to these different histories and frequencies of carrion subsidies have often been independently investigated, with little effort to compare and bridge research boundaries in the broader context of resource subsidies. In this review, we provide a synthesis of how pulsed carrion nutrient and energy subsidies have widespread and lasting impacts on many aquatic ecosystems. We do this with a synthesis of literature from freshwater and marine ecosystems along three themes of how carrion is produced and decomposes: autochthonous and allochthonous necromass; phenology-based mortality; and stochastic and episodic mass mortality subsidies. Studies of charismatic megafauna carrion (e.g., whales) have described significant impacts in deep ocean systems, but much less is understood for other groups of animals. Quantifying the energy, nutrient, and foodweb effects of carrion is needed for more species and among habitats to more fully understand how ubiquitous forms of necromass contribute to aquatic ecosystem structure and function.

Introduction to Necromass Resource Subsidies in Aquatic Ecosystems

Background

Decaying organic matter, or necromass, comes in the form of both plant and animal biomass, recently differentiated as autotrophically (e.g., leaf litter) and heterotrophically (e.g., carrion) derived biomass, respectively, and is recycled back into ecosystems by the necrobiome community (Benbow et al., 2019). While both forms of necromass are considered important to ecosystems, plant detritus processing has historically dominated research as the main energy pathway in aquatic ecosystems (Vannote et al., 1980; Webster and Benfield, 1986; Getz, 2011; Boyero et al., 2016), especially for lotic systems lacking anadromous fish populations (Moore et al., 2004; Gessner et al., 2010; Benbow et al., 2019). Until recently (McDowell et al., 2017; Subalusky et al., 2017; DuBose et al., 2019; Wenger et al., 2019), aquatic studies of animal necromass (carrion) have largely focused on fish carcass decomposition (Richey et al., 1975; Garman, 1992; Schindler, 1992), or lake/marine snow represented by zooplankton carcasses in the water column of lentic ecosystems (Alldredge and Silver, 1988; Grossart and Simon, 1998; Giering et al., 2014). Some research has addressed the long-term decomposition of whale (and other vertebrate) falls in the oceanic abyss (Allison et al., 1991; Bennett et al., 1994; Smith and Baco, 2003; Kemp et al., 2006; Higgs et al., 2014). Much of past research on carrion in aquatic ecosystems has focused on species that are large in size, have anthropogenic importance (e.g., salmon runs), or elicit public intrigue (e.g., whale falls); however, a large portion of aquatic ecosystem necromass comes in the form of smaller organisms (e.g., phytoplankton, zooplankton, and invertebrates) with fast generation times and high turnover rates that substantially contribute to ecosystem production (Waters, 1977; Benke, 1998; Huryn and Wallace, 2000; Landry and Calbet, 2004; Patrick et al., 2019). While we acknowledge the importance of phototrophically derived necromass in aquatic ecosystems and the associated trophic relationships (Little and Altermatt, 2018), we direct interested readers to the many extensive reviews and empirical research of such resources ranging from phytoplankton, seaweed, and macrophytes to large wood debris (Lindeman, 1942; Mann, 1969; Wallace et al., 1999; Moore et al., 2004; Entrekin et al., 2009; Tank et al., 2010).

For this review, we focus on heterotrophically derived necromass (from bacteria to whales) with emphasis on animal carrion, and also acknowledge that dung, frass, and other forms of animal tissue (e.g., gametes) contribute to the larger resource pool (Subalusky et al., 2015; Dutton et al., 2018; Subalusky and Post, 2018; Benbow et al., 2019). For an informative argument for the importance of egested heterotrophically derived forms of particulate organic matter to energy budgets of pelagic zones of lake ecosystems we direct readers to Wetzel (1995).

In general, the importance of carrion has been qualitatively considered relatively greater in large lakes and oceans (Alldredge and Silver, 1988; Smith and Baco, 2003; Tang et al., 2014) compared to shallow wetlands and marshes (Brinson et al., 1981; Duggins et al., 1989). However, Subalusky and Post (2018) discuss how recipient ecosystem qualities (e.g., productivity or trophic structure) are important for understanding cross-system effects of carrion. In watersheds, carrion has been largely studied as pulsed resource subsidies like fish die-offs (Parmenter and Lamarra, 1991) or as part of programed phenologically driven semelparous death like salmon life cycles (Moore et al., 2004; Benbow et al., 2019). Regardless of origin, most organic matter ultimately decomposes and is recycled in ecosystems (Wetzel, 1995; Moore et al., 2004; Benbow et al., 2019), providing an intimate connection between ecosystem structure and function through interacting necrobiome species responsible for the breakdown (physical destruction into smaller and smaller units) and decomposition (biochemical alteration and conversion) of necromass (Lindeman, 1942; Putman, 1983). This process of decomposition, or turnover rate, is also known to be much faster for carrion compared to plant litter biomass, and is more important to ecosystems than once considered (Barton et al., 2019).

Precedent From Terrestrial Ecosystems

Most studies of carrion ecology have been conducted in terrestrial ecosystems. Here we provide examples from terrestrial habitats to show the potential of carrion to ecosystems, which can potentially be transferred to aquatic conditions. In terrestrial systems, carrion has often been thought to contribute marginally to ecosystem energetics (Swift et al., 1979; Barton et al., 2019). However, Barton et al. (2019) argue that because of the high turnover rate of carrion, carcasses have historically gone understudied since they are quickly recycled back into the ecosystem and are hidden from observation; thus, they have been presumed to have a negligible contribution to energy and nutrient flow in ecosystems. This view is plausible because it has been historically difficult to quantify natural rates of carrion decomposition in ecosystems, and so the relative production of energy from carrion compared to the production from an equivalent amount of plant necromass may be disproportionate and underestimated (Barton et al., 2019). As one example (see review by Scott, 1998), burying beetles have been shown to remove and conceal 91% of exposed small (21–210 g) mammal carcasses by burial within an average of 1.4 days (Trumbo, 1992). In the same study, 22.7% of the exposed carcasses were eaten or removed by vertebrate scavengers. This example demonstrates how quickly small carrion can be removed from scientists’ observation.

Decomposing carcasses contribute hot spots of nutrient release (Carter et al., 2007; Benbow et al., 2019) that in terrestrial systems can have direct and indirect long-term (e.g., months to years) effects on soil conditions (Bornemissza, 1957; Strickland and Wickings, 2015), plant communities (Towne, 2000; Wardle et al., 2004), and both invertebrate and vertebrate scavengers (Bump et al., 2009; Beasley et al., 2012; Barton et al., 2013; Benbow et al., 2015). The spatial extent of such effects in ecosystems has not been well documented, but could be potentially important over decades (Bump et al., 2009). As an example of this potential, Hawlena et al. (2012) found that fear of spider predation by living grasshoppers resulted in carcasses with significantly higher carbon to nitrogen ratios than non-stressed specimens, and the resulting change in carcass quality, even when the biomass was about 140 times lower than the plant litter biomass, affected below ground community function and subsequent leaf litter decomposition on carcass sites in an old prairie ecosystem. Thus, even small amounts of carrion biomass have significant effects on measurable ecosystem processes, such as leaf litter decomposition and soil function, suggesting that if scaled by population density, mortality rates, and turnover in a landscape carcasses may significantly impact ecosystem functions in ways yet to be examined. If scaled in this manner, carrion will likely be shown to have collective ecosystem level effects like those recognized for ungulate dung and urine deposition in prairies (Norman and Green, 1958; Seastedt et al., 1991) or hippopotamus dung for some African rivers (Subalusky et al., 2015).

The Need to Scale From Carcass to Collective Effects

The hypothesis that individual carcass effects can have large spatial and long temporal scale effects has been supported by work in Isle Royale National Park, Michigan (Bump et al., 2009). In this 50-year study of the effects of over 3,600 wolf-killed moose carcasses on landscape heterogeneity and ecosystem function, Bump et al. (2009) reported that soil nutrients (e.g., 100–600% higher inorganic nitrogen at carcass compared to control sites), microbial biomass, microbial community composition, and surrounding plant leaf nitrogen (e.g., leaf nitrogen was 25–47% greater at carcass sites) was significantly elevated for at least 2–3 years at carcass deposition locations. In case studies of whale falls, Smith and Baco (2003) estimate that the sediment beneath whale carcasses receive a pulse of organic matter that is equal to almost 2000 years of background material over decomposition. Furthermore, in observations on large elasmobranch (i.e., whale shark and mobulid rays) carcass falls, Higgs et al. (2014) estimated that such carcasses represent on average about 4% of the normal particulate organic carbon flux to the seafloor in the bounding area of their occurrence. The authors suggest that the deep-sea scavenger communities benefit most from these significant energetic subsidies.

The same considerations for the underappreciated role of carrion in terrestrial ecosystems or the deep sea abyss is true for other aquatic ecosystems, where studies have documented localized carcass effects in salmon-bearing streams, whale falls, and other fauna of the deep ocean benthos (Smith and Baco, 2003; Kemp et al., 2006; Anderson and Bell, 2014; Higgs et al., 2014), including prehistoric carrion (Reisdorf et al., 2012; Danise et al., 2014); fish and waterfowl carcasses of salt marshes (Parmenter and Lamarra, 1991); and additional carcass effects likely in most aquatic habitats.

Indeed, vertebrate carrion placed in deep (300–3000 m) marine habitats initiates a succession of both invertebrate and vertebrate scavengers that take advantage of this punctuated, heterotrophically derived subsidy (Kemp et al., 2006; Anderson and Bell, 2016). What is less understood is how individual carcasses scale with mortality at population and community levels of biological organization. New studies are needed to better use population demographics and mortality estimates for calculating ecosystem level carrion production from species that do not have phenology-based or episodic mass mortalities. In Figure 1 of Barton et al. (2019) aquatic carrion biomass ranged from 102 kg/km2 for copepods up to 107 kg/km2 for bivalves, with different species of fish ranging from about 103 to 106 kg/km2. Among the examples they provided, terrestrial vertebrate biomass was at least two orders of magnitude lower than aquatic species at 103 kg/km2. While this example is not comprehensive, it does suggest that the effect of heterotrophically derived necromass in ecosystems is likely much greater than historically considered. To better incorporate the contributions of carrion in aquatic ecosystem energy and nutrient budgets, additional studies are needed that directly quantify carcass necromass and turnover across biomes. Such broadly available data on non-consumptive heterotrophically derived necromass in ecosystems would advance theory in consumer-resource and food web ecology (Getz, 2011).

In this paper we support the arguments of Subalusky and Post (2018) and Barton et al. (2019) that carrion resources are important subsidies in most ecosystems. We do this with a synthesis of literature from freshwater and marine ecosystems along three themes of how carrion is produced and decomposes through the following: autochthonous and allochthonous necromass decomposition; phenology-based mortality; and stochastic and episodic mass mortality subsidies. We provide examples and case studies that collectively show that carrion, along a size continuum that spans multiple orders of magnitude, likely plays an underappreciated role in ecosystem energetics and nutrient dynamics. Furthermore, we posit that death links living resource pools of multiple and interacting populations of species through pathways of non-consumptive mortality that result in a dead resource pool represented by carcasses that are quickly decomposed and recycled back into the living resource pool through detritivores and omnivores (Figure 1). In aquatic systems, such carrion represents autochthonous or allochthonous energy and nutrient subsidies that affect foodwebs and ecosystem function in complex and understudied ways.

FIGURE 1
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Figure 1. Conceptual diagram linking living resource pools to dead resource pools through the death and decomposition of heterotrophically derived biomass in the form of carrion subsidies. Each species is part of a living resource pool that encompasses growth, development, and reproduction; however, death of a proportion of the living individuals leads to the scavenging or decomposition of the once living biomass (or necromass) that ultimately becomes incorporated into the living resource pool through food web interactions. Death can come in the form of consumptive mortality (i.e., cannibalism or predation) where the nutrients and energy of dead organisms goes back to the living resource pool. Death can also come in the form of non-consumptive mortality, as part of natural senescence of the life cycle that can be through phenology-based (e.g., salmon life cycle) or stochastic/episodic (e.g., mass mortality of bivalve populations) processes. The resulting decomposition of these carrion subsidies can be autochthonous or allochthonous, depending on the life history and range of the once living species, affecting energy and nutrient flow within and among ecosystems.

Autochthonous and Allochthonous Carrion Necromass

Similar to phototrophically derived detritus, carrion necromass in aquatic ecosystems can come in the form of autochthonous and allochthonous sources. Carrion necromass of aquatic ecosystems can be generated from within or outside of a system in the form of autochthonous and allochthonous resources, respectively (Figure 1). As part of the autochthonous resource pool, carcasses resulting from natural senescence, physiological intolerance, or disease-related death of aquatic heterotrophs enter the detrital pool based on rates of mortality, disease, partial predation, and generation times related to natural senescence. These resources represent necromass from all organisms that live in aquatic habitats, from bacteria to blue whales (Minshall et al., 1991; Fenoglio et al., 2005; Subalusky and Post, 2018).

For any specific taxon, the degree of natural senescence, physiological intolerance (e.g., temperature, physical and chemical thresholds), or disease-related non-consumptive death contribute to the within-system detrital pool and associated energy and nutrient dynamics. For instance, non-consumptive mortality is a natural part of the population dynamics of any species, but the overall magnitude is rarely quantified, except for studies related to aquaculture production of commercially important taxa (Rowe et al., 1989; Karunasagar et al., 1994; Chen et al., 1995; Lorenzen, 1996). Furthermore, the mere presence of predators is known to have negative effects on life history traits and fitness of many species (Preisser et al., 2005). Since many organisms are prey for a variety of predators, this collective effect of non-consumptive predation threats can lead to facilitated senescence within many animal populations, although this form of non-consumptive mortality has not been broadly studied. In general, non-consumptive predator effects have been documented to be as strong or stronger than direct predation effects for many species, and the non-consumptive predator presence effect is generally stronger in aquatic than terrestrial ecosystems (Preisser et al., 2005).

Non-consumptive effects can come in the form of increased costs of defensive strategies that include lower mating success, increased vulnerability to other predators, energetic investments related to finding resources or defensive structures (e.g., morphology or biochemical), or through reduced survivorship (Kotler et al., 1993; Preisser et al., 2005; Sheriff et al., 2009). For instance, McCauley et al. (2011) reported significant non-consumptive predator induced mortality and failed metamorphosis to adults in dragonfly larvae exposed to predatory fish and other dragonfly predators. Depending on predator density, survivorship was 1.2–4.3 higher under no-predator mesocosm conditions. The mechanisms responsible for such non-consumptive predator induced mortality are not clear, but have been speculated to be related to increased susceptibility to disease and energetic costs of foraging related to induced stress (Ramirez and Snyder, 2009; Hawlena and Schmitz, 2010). This example demonstrates that just the presence of a predator leads to greater mortality, supporting the hypothesis that there are degrees of non-consumptive mortality that occur in natural environments; however, the mechanisms and sources of non-consumptive mortality are difficult to identity and quantify. Such non-consumptive mortality may result in increased heterotrophically derived necromass contributions to ecosystem organic matter budgets through decomposition (Figure 1).

The non-consumptive component of population mortality has not been studied in any detail for most aquatic organisms, and is often presumed negligible in ecosystem level budgets or calculations of secondary production where predator consumption rates have often been assumed to lead to 100% prey mortality (Hynes, 1970; Waters, 1977; Wetzel, 1995). This absolute consumption rate is not often the case in natural systems, with many individuals of a population avoiding predation and succumbing to other means (e.g., disease or starvation) of mortality (Wetzel, 1995). Thus, the availability of carcasses to aquatic ecosystems is likely larger than previously assumed, especially if the effects of individual carcasses are scaled by their collective density and rates of availability in the environment as discussed by Barton et al. (2019).

The effect of individual carcasses on ecosystem structure and function has been shown to be variable (Minshall et al., 1991; Fenoglio et al., 2005; Barton et al., 2019; Benbow et al., 2019); however, individual carcass effects have not been scaled to account for population level mortality over space and time in a way that would reveal the collective pool of heterotrophically derived necromass for ecosystems based on natural, non-consumptive rates of mortality (Barton et al., 2019). A significant challenge to addressing this need lies with differentiating natural senescence, starvation, climate, or disease-related mortality from predation or consumption rates for a specific population. Quantifying non-consumptive mortality is inherently difficult, but could potentially be done by evaluating life tables (Deevey, 1947) of organisms with and without predators, much like that for humans (Haldane, 1953). Additional studies are needed to devise ways to account for non-consumptive mortality, much like that of recent examples that quantified seal (Quaggiotto et al., 2018) and wildebeest (Subalusky et al., 2017) mortality on aquatic ecosystems. However, there have been surprisingly few studies on non-consumptive mortality of micro- and macroinvertebrates; those taxa that can often have fast generation times and high mortality.

Potential ways to quantify non-consumptive mortality of macroinvertebrates can come from life history and secondary production studies in the absence of predators in natural ecosystems or from more artificial conditions, such as those conducted for ecotoxicology studies and aquaculture. Some estimates of macroinvertebrate secondary production are available from fish-bearing and fishless lakes (Arnott and Vanni, 1993; Northington et al., 2010), but the body size distributions are not often reported to allow for estimates of non-consumptive mortality and how that may mediate secondary production. It is often assumed in studies of secondary production that population loss can all be attributed to predation, but this is likely not the case. Data from control groups (e.g., no treatment with a contaminant) used in ecotoxicology studies may also provide data on non-consumptive mortality, but often these experiments are done under artificial conditions associated with laboratory or field mesocosms, where densities and abiotic conditions may not represent natural conditions (Rand et al., 1995; Boudou, 2018). These artificial conditions are similar to aquaculture systems and associated research (Huet et al., 1986). The degree to which non-consumptive mortality in aquaculture conditions differs from natural ecosystems is not well understood. Another potential mechanism for determining non-consumptive mortality in aquatic populations, and employed in fisheries management, is to derive mortality–weight relationships in populations in different natural ecosystems compared to conditions with eliminated or significantly reduced predation pressure (Lorenzen, 1996, 2000). For instance, Lorenzen (1996) reported allometric scaling of fish mortality to non-predatory mortality by modeling mortality–weight relationships of fish populations from natural ecosystems compared to ponds/cages and tanks with no predation pressure. In these conditions, mortality is attributed to diseases, water quality problems, or winter starvation (Huet et al., 1986). The derived weight exponents of mortality were consistently negative for populations in ponds/cages/tanks compared to natural ecosystems, suggesting non-predatory mortality is more weight (i.e., surrogate for age) dependent than is predatory mortality.

Additional information on carrion impacts on aquatic ecosystems can be gathered from mass mortality studies of autochthonous heterotrophs (see the section “Stochastic and Episodic Mass Mortality and Decomposition”) and those related to programed phenology-based death of allochthonous taxa. As part of allochthonous resources, carcasses ultimately come from outside of the system and may include anadromous (e.g., salmon, sturgeon) or catadromous (e.g., eels) vertebrates, crustaceans, and molluscs (e.g., amphidromous shrimp and snails) that spend a portion of their life cycle growing and developing in other habitats or ecosystems (e.g., ocean or mangroves), but complete their life cycle in the freshwater environment (McDowall, 1988; Cederholm et al., 1989; Thuesen et al., 2011; Weaver et al., 2018). These resource subsidies can be made available through natural senescence, physiological intolerance, starvation, or disease-related, non-consumptive death (e.g., amphidromous herring) or through programed phenology-based mortality (e.g., post-spawning salmon). The effects of allochthonous sources of necromass have been studied in considerable detail, especially for salmon, both within its native range (Cederholm et al., 1989; Schindler, 1992; Chaloner et al., 2002; Janetski et al., 2009), but also where it has been introduced to naïve watersheds (Richey et al., 1975; Schuldt and Hershey, 1995; O’Toole et al., 2006).

Parasitized terrestrial insects can also represent allochthonous inputs in aquatic systems, entering streams from the riparian canopy due to modified behavior associated with their parasites (Schmidt-Rhaesa, 2001; Thomas et al., 2002). In one well-documented example, the horsehair worm (Nematomorpha) infects the camel cricket (Orthoptera: Rhaphidophoroidae) in Japanese watersheds. Once infected, the riparian crickets either slowly enter or jump into the streams, upon which the parasite leaves the body immediately or soon after the cricket is dead. These terrestrial subsidies have been shown to lower predation of resident aquatic invertebrates (Sato et al., 2008, 2011a,b, 2012). While not as well studied, other parasite-infected terrestrial insects (e.g., praying mantis) can also enter water with immediate horsehair release (Schmidt-Rhaesa, 2001). These examples suggest that parasitized insect subsidies enter the detrital pool upon death if not consumed, and may also offer a predatory release of other species that could potentially lead to additional non-consumptive mortality of those species in stream ecosystems.

Phenology-Based Mortality and Decomposition

A variety of aquatic organisms use phenology-based cues, such as temperature and day length, to control important behaviors including migration, hatching, and spawning. While these behaviors play critical roles in the fitness of the organisms themselves, they also affect other taxa throughout the food web. For example, the movement of anadromous fish can transport large amounts of nutrients and biomass upstream through their spawning activities and phenology-based mortality (Cederholm et al., 1999; Schindler et al., 2003; Wipfli et al., 2003), which are then used by other consumers (Bilby et al., 1996; Chaloner et al., 2002; Baxter et al., 2005; Hocking and Reynolds, 2011). Although mass mortality events of semelparous fish (e.g., salmon) following spawning are a dramatic introduction of necromass into freshwater systems, the release of eggs (which commonly exhibit high rates of mortality) and excrement by both iteroparous and semelparous fish comprise an important, though less studied, component of the available necromass, in some cases exceeding the nutrient inputs from carcasses (Tiegs et al., 2011; Childress and McIntyre, 2015). These inputs represent a major linkage of marine and freshwater systems as many anadromous fish derive most of their mass (>95%) from marine-based sources before migrating into freshwater systems via migration and subsequent semelparous death (Mathisen et al., 1988; Cederholm et al., 1999; Lamberti et al., 2010).

In contrast to stochastic mass mortality events, phenology-based events provide a regular input of nutrients into aquatic systems, with many organisms altering their life histories to coincide with these predictable influxes of resources (Hocking and Reynolds, 2011; Lisi and Schindler, 2011; Deacy et al., 2017). Predators, such as mink (Mustela vison) or brown bears (Ursus arctos), alter their behavior and timing of reproduction to coincide with the availability of salmon runs (Ben-David, 1997). These scavengers use salmon as a major nutritional source, in some locations obtaining >90% of their carbon and nitrogen from these fish (Willson and Halupka, 1995; Hilderbrand et al., 1996, 1999). The landscape can also affect how salmon carcass resource subsidies impact terrestrial and estuarine ecosystems, with differences reported in how wolves and bears transport carcasses to riparian forests and meadows depending on stream size and location within the watershed (Harding et al., 2019). A range of other mammals, birds, and insects use the carcasses of anadromous fish as resources that can affect the decomposition dynamics in streams (Cederholm et al., 1989; Zhang et al., 2003) and alter their behavior to better use and consume these resources (Moore and Schindler, 2010). In addition to direct consumption by eukaryotes, carcasses in aquatic systems can have strong interactions with microbial communities (Wipfli et al., 1998; Pechal and Benbow, 2016; Pechal et al., 2019). Although the impact of decomposing carcasses is highly dependent on biotic and abiotic factors (e.g., stream physical structure, riparian conditions, organisms present, etc.) the input of nutrients from carcasses stimulates microbial activity and primary production (Mitchell and Lamberti, 2005), leading to additional effects on higher trophic levels (Wipfli et al., 1998; Cederholm et al., 1999; Gende et al., 2002).

Salmon carcasses can also act as a resource subsidy to estuaries of salmon-bearing streams (Cederholm et al., 1999; Gende et al., 2004; Cak et al., 2008), with linkages to macroalgae through copepods (Fujiwara and Highsmith, 1997), marine invertebrates including echinoderms and crustaceans (Reimchen, 1994), and vertebrate taxa, such as coyotes and wolves (Gende et al., 2004). The availability of these resources to estuary systems can be mediated by complex interactions among trophic groups and habitat conditions. While the feeding activity of gray wolves (Canis lupus) and bears (Ursus spp.) can transfer carcasses from stream reaches to riparian habitats (Gende et al., 2004), where they become available to other scavengers, how many and which species of salmon they transfer depends on both species-specific interactions and landscape structure (e.g., riparian habitat and length of spawning reach) (Harding et al., 2019). Besides their well-documented effects during spawning seasons, inputs of necromass can have residual effects across seasons, with spawning salmon biomass in the autumn predictive of bird density and diversity in estuaries the following summer (Field and Reynolds, 2011). Findings such as these illustrate the important and complex roles necromass and phenology-based mortality play in aquatic ecosystems.

Although few aquatic insects have evolved to feed directly on carrion, the influx of nutrients from salmon carcasses, and resulting increases in primary production, can increase aquatic insect density by 8–25 times in artificial and natural streams where carcasses are present (Wipfli et al., 1998; Fenoglio et al., 2014). Isotopic studies have shown that salmon-derived carbon and nitrogen is incorporated into both primary producers and invertebrate feeding groups that consume microbes (e.g., filterers and grazers) (Bilby et al., 1996; Johnston et al., 1997; Guyette et al., 2014). While salmon remains the best studied example of phenology-based mortality (Schindler et al., 2003), they are by no means the only group of aquatic animals with programed mortality that leads to cascading effects in aquatic ecosystems. In addition to bony fish and invertebrates (see below), carcasses of other aquatic organisms, such as the sea lamprey (Petromyzon marinus), represent important nutrient sources, connect marine and freshwater systems, and can stimulate primary productivity (Weaver et al., 2018). While catadromous organisms which migrate to the ocean to spawn, [e.g., eels (Anguilla spp.)], also link marine and freshwater systems; how their behavior impacts marine ecosystems remains largely unknown. However, their spawning and subsequent death likely introduces considerable nutrients into otherwise oligotrophic environments where spawning occurs (e.g., Sargasso Sea).

Stochastic and Episodic Mass Mortality and Decomposition

Vertebrate Carrion Mass Mortalities

One of the most striking examples of vertebrate mortality altering aquatic ecosystem comes in the form of episodic mass death, and the resulting carcasses that undergo decomposition, due to stochastic factors not easily predicted in nature (Fey et al., 2015). Mass fish kills are one of the most visible forms of this kind of mass mortality, where tens of thousands of fish may die within a short (e.g., hours to days) period of time, causing mass decomposition in the water and on banks of aquatic ecosystems (Ochumba, 1990; Thronson and Quigg, 2008). Fey et al. (2015) reported fish mass mortality events made up about 56% of all mass mortality events reported in scientific literature since the 1940s (N = 727). Episodic mass mortalities can be the result of stochastic changes in physical–chemical conditions (Cooper, 1993), toxic algal blooms (Hallegraeff, 1993), disease (Grizzle and Brunner, 2003), pollutants (Cooper, 1993), and other unknown factors. In many instances these conditions are the result of eutrophication over many years (Vollenweider, 1970; Harper, 1992; Nixon, 1995), or through punctuated high inputs of nutrients, like in the case of hippopotamus urine and feces (Subalusky et al., 2015) or mass drownings of wildebeest (Subalusky et al., 2017; Dutton et al., 2018). There are also other forms of vertebrate mass mortality that occur in aquatic ecosystems (Fey et al., 2015). For instance, annual mass drownings of wildebeest (Subalusky et al., 2017), aquatic reptiles (Rachowicz et al., 2006) and mammals that succumb to disease (Osterhaus et al., 1997; Kennedy, 1998) have both short- and long-term effects on ecosystem function. Fey et al. (2015) also provide an excellent quantitative assessment of mass mortality events worldwide, showing an increase in their occurrence for mammals, birds, amphibians, reptiles, fish, and marine invertebrates since 1940.

Invertebrate Carrion Mass Mortalities

Much like cicada emergences that have been quantified to have significant impacts on terrestrial food webs and ecosystems (Yang, 2004), mayflies (Ephemeroptera), midges (Gratton et al., 2008), salmonflies (Plecoptera) (Walters et al., 2018; Wesner et al., 2019), and other aquatic insects (Baxter et al., 2005) emerge in masses as adults to mate and die, with their carcasses falling back to the aquatic habitat or into the adjacent riparian zones and inland landscapes (Gergs et al., 2014). When these mass emergences cross habitat or ecosystem boundaries (e.g., from a stream or lake onto the shoreline), such cross-ecosystem resource subsidies (Polis et al., 1997) can represent significant nutrient and energy pulses (Polis, 1994; Polis and Hurd, 1996). For example, Wesner et al. (2019) reported that for several stream sites with massive emergences of salmonflies (Pteronarcys californica), the resulting insect carrion deposition on the adjacent shore over only a single week was equal to or greater than annual atmospheric nitrogen and phosphorus deposition and the annual secondary production of all terrestrial insects from that watershed. Such contributions to the detrital pools of adjacent ecosystems have not been well studied, especially compared to the living emerged insects that are consumed by predators. Indeed, more studies are needed to better quantify the contributions of necromass originating from aquatic ecosystems and acting as resource subsidies to the decomposition budgets of adjacent ecosystems.

Mass mortalities of aquatic invertebrates, beyond what was discussed above with parasite-mediated terrestrial insect drownings, also affect in-stream and riparian communities and ecosystem properties. While not as well documented as fish subsidies, invertebrate mass mortalities have significant and sometimes long lasting effects on aquatic ecosystems since many of the invertebrate species, like mussels, have important functional roles (Vaughn, 2018), but also can contribute mass subsidies of highly recalcitrant structures, such as shells of molluscs (McDowell et al., 2017; DuBose et al., 2019). Beyond the pulsed effects of nutrient release related to rapid soft tissue decomposition of bivalves, Wenger et al. (2019) estimated that mussel shells from mortality events may have once provided about 1% of total phosphorus load in streams and rivers of the southeastern United States.

McDowell and Sausa (2019) reviewed the effects of mass mortality effects of the invasive bivalves Corbicula sp., the zebra mussel Dreissena polymorpha, the golden mussel Limnoperna fortunei, and the Chinese pond mussel Sinanodonta woodiana. Low and high water temperatures and water levels were the leading causes of mass mortality of both invasive and native species. There were short-term (i.e., over days) nutrient pulse releases associated with en masse soft tissue decomposition and longer-term microhabitat effects in the form of remaining shells both as part of the benthic substrata but also on stream and river banks. For instance, a mass mortality event of about 100 million C. fluminea contributed an estimated 751 kg of carbon, 180 kg of nitrogen, and 45 kg of phosphorus to a stream over the course of several days (McDowell et al., 2017). The dead and dying bivalve carcasses may also serve as food resources for local scavengers like fish, invertebrates, and birds (Mouthon and Daufresne, 2006; McDowell and Sausa, 2019). Mass mortality of C. fluminea left on stream banks attract a wide diversity of terrestrial invertebrates (Novais et al., 2015) and below ground nutrients (Novais et al., 2017), suggesting that bivalves washed onto banks during floods can become pulsed resources subsidies for adjacent habitats.

Mass mortality events also occur throughout the world in marine and estuarine habitats, and not surprisingly changing climate patterns and warming temperatures are increasing their magnitude and frequency (Coma et al., 2009). While not always independent of increases in water temperature, diseases also contribute to marine invertebrate mass mortality (Harvell et al., 1999). Not matter what the cause, marine invertebrate mass mortality has significant effects on coral reef and intertidal ecosystems by affecting both hard and soft corals, benthic burrowers and filterers with cascading effects on upper trophic level consumers (Knowlton, 2004). These massive death events are often extensive. For instance, in 2016, one of the three pan-tropical mass coral bleaching events occurred in the Great Barrier Reef of Australia as a result of a significant marine heat wave, where 90% of the surveyed reefs suffered mortality (Hughes et al., 2017). The ecosystem consequences of this event included significant community restructuring, functional changes, and widespread declines in consumers resulting directly from the water temperature increases, but also in relation to coral loss (Stuart-Smith et al., 2018). Increased frequency and magnitudes of such global weather events will have widespread ecological impacts on all ecosystems, with mass mortalities contributing to many of the most negative effects of a changing climate.

Summary

Death and decomposition occur in all ecosystems, but the extent and magnitude of the resulting necromass varies in space and time. Some forms of necromass come from within the system, as part of the life cycles and life histories of the resident organisms (e.g., planktonic snow in a lake or ocean or insects in a stream) or during mass deaths resulting from changing and intolerable habitat conditions (e.g., fish kills and coral reef bleaching). Other forms of necromass subsidies come from outside of the system, sometimes as migratory fish (e.g., salmon) or parasitized terrestrial insects that have been behaviorally hijacked to enter aquatic habitats where they drown. In all cases, the once living biomass becomes an often significant and functionally important component of the detrital pool. This component of heterotrophically derived necromass has historically been difficult to quantify due to the rapid turnover of such labile resources, and has arguably been overlooked or underappreciated in many ecosystem level energy and nutrient budgets. Recent work has provided conceptual models and methods for improving the ability to identify, quantify, and better study how carrion resource subsidies affect aquatic ecosystems, ranging from small, headwater streams to saltmarshes and mangroves, to the deep oceanic abyss and enormous stretches of coastline habitats around the world. Furthermore, while studies of megafauna carrion (e.g., whales and whale sharks) have demonstrated significant impacts to deep ocean habitats, much less is understood for other groups of animals. Quantifying the energy, nutrient, and foodweb effects of autochthonous and allochthonous carrion resulting from non-consumptive morality, phenology-based mortality and stochastic and episodic mortality events will allow broader assessments of all necromass contributions in aquatic ecosystems. With advances in geographical (e.g., drones and satellite imagery), genomic (e.g., next-generation sequencing), and other forms of technology (e.g., cell phone cameras and associated software) it will become increasingly feasible to quantify baseline levels of carrion to more fully evaluate how this resource subsidy affects ecosystem energy and nutrient dynamics.

Author Contributions

MB, JR, and GL performed the literature search, and writing and editing of this review.

Funding

MB was supported by the College of Agriculture and Natural Resources and College of Osteopathic Medicine of Michigan State University. GL was supported by the Department of Biological Sciences and the Environmental Change Initiative at the University of Notre Dame.

Conflict of Interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Acknowledgments

We would like to thank P. Barton, J. Tomberlin, H. Jordan, and A. Tarone for thoughtful discussions that have led to this manuscript, and J. Pechal also for reviewing an earlier version. This manuscript was the ultimate product of a special session at the 2018 Annual Meeting of the Society for Freshwater Science, hosted in Detroit, MI (https://freshwater-science.org/annual-meeting) by MB and GL, where many other scientists inspired our writing through their presentations and manuscript contributions to this special issue.

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Keywords: decomposition, microbial, ecosystem metabolism, community assembly, necrobiome, carrion, mass mortality, forensics

Citation: Benbow ME, Receveur JP and Lamberti GA (2020) Death and Decomposition in Aquatic Ecosystems. Front. Ecol. Evol. 8:17. doi: 10.3389/fevo.2020.00017

Received: 29 August 2019; Accepted: 21 January 2020;
Published: 07 February 2020.

Edited by:

Alexei B. Ryabov, University of Oldenburg, Germany

Reviewed by:

Ralf Schulz, University of Koblenz Landau, Germany
Zhang Yixin, Soochow University, China

Copyright © 2020 Benbow, Receveur and Lamberti. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

*Correspondence: M. Eric Benbow, benbow@msu.edu

ORCID: M. Eric Benbow, orcid.org/0000-0003-2630-0282

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