The neuroimaging informatics tools and resources clearinghouse (NITRC)
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1
University of Massachusetts Medical School, United States
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2
UCSD, United States
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3
TCG, Inc., United States
Introduction:We report on the continued use and development of a neuroimaging informatics knowledge environment for neuroimaging entitled: Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC). Initiated in October 2006 through the NIH Blueprint for Neuroscience Research (1,2), NITRC’s mission is to create a user-friendly knowledge environment for the neuroimaging community. Through the identification of existing tools and resources valuable to this community, NITRC’s goal is to develop a knowledge environment to enhance, adopt, distribute, and contribute to the evolution of neuroimaging tools and resources.
Located on the web at www.nitrc.org, this site promotes tools and resources, vocabularies, and databases, thereby extending the impact of previously funded, neuroimaging informatics contributions to a broader community. It is anticipated that this will give fMRI researchers greater and more efficient access to the tools and resources they need, better categorize and organize existing tools and resources, facilitate interactions between researchers and developers, promote better use through enhanced documentation and tutorials—all while keeping the set of resources up-to-date with the most recent resource upgrades and updates, including information feeds from other popular information resources.
Approach:To meet the disparate needs of resource developers and users, NITRC requires functionality like that found in platforms such as Source Forge, Bugzilla, CVS, Wiki, etc. To unify such functionality, we have chosen to design the knowledge environment using the open-source GForge project (3). Within the NITRC environment a ‘project’ is created for each tool or resource that is to be represented. Each project will have independent descriptive content (as projects do currently at IATR, (4)), as well as Wiki, CVS, bug tracking, news forums, and discussion lists associated with it. Descriptions can be housed on the NITRC servers themselves, passed through to an external, preexisting site for content management.
The site was formally launched to the public on Oct. 1, 2007. There are currently 164 hosted projects, and 819 registered users, and these numbers are increasing daily. NITRC encourages feedback, through surveys of its users to make the site as accessible as possible.
Summary:NITRC, a dynamic neuroimaging knowledge environment, continues to thrive and expand its online presence. We encourage the neuroimaging community to continue to utilize it and provide feedback on its design, tools, resources, and content. NITRC is a knowledge environment for the neuroimaging community where tools and resources are presented in a coherent and synergistic environment for the advancement of neuroscience research.
Acknowledgement: This work is supported by Contract No.: N02-EB-6-4281 under the auspices of the NIH Blueprint for Neuroscience Research.
Conference:
Neuroinformatics 2009, Pilsen, Czechia, 6 Sep - 8 Sep, 2009.
Presentation Type:
Oral Presentation
Topic:
Neuroimaging
Citation:
Kennedy
D,
Haselgrove
C,
Grethe
J,
Buccigrossi
R,
Wagner
K and
Preuss
N
(2019). The neuroimaging informatics tools and resources clearinghouse (NITRC).
Front. Neuroinform.
Conference Abstract:
Neuroinformatics 2009.
doi: 10.3389/conf.neuro.11.2009.08.024
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Received:
21 May 2009;
Published Online:
09 May 2019.
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Correspondence:
David Kennedy, University of Massachusetts Medical School, Worcester, United States, david.kennedy@umassmed.edu